[Insight-users] itk and python

[Mario Ceresa]

Hello José,

>> where do I find CableSwig, in my linux distribution or in the itk source
>> code?

you might want to read:

http://www.itk.org/ITK/resources/CableSwig.html

for hints on how download and install CableSwig.

> what about performance and memory consumption of WrapITK?

While calling ITK from python might add a small overhead, performance
are very good when you call directly the underling C++ code. As for
memory, it largely depends upon the size of your images.

Regards,

Mario

2009/11/19 Lic. José M. Rodriguez Bacallao <jmrbcu at gmail.com>:
> what about performance and memory consumption of WrapITK?
>
> On 11/19/09, Lic. José M. Rodriguez Bacallao <jmrbcu at gmail.com> wrote:
>> where do I find CableSwig, in my linux distribution or in the itk source
>> code?
>>
>> On 11/19/09, Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr> wrote:
>>>
>>> Le 19 nov. 09 à 16:45, Lic. José M. Rodriguez Bacallao a écrit :
>>>
>>>> which are the dependencies of WrapITK from code.google.com, do I need
>>>> swig, cableswig and gccxml or just swig and gccxml?
>>>
>>> "Note that two tool packaged with CableSwig are still needed — gccxml
>>> and cableidx — that's why you still have to install CableSwig package
>>> to build WrapITK."
>>>
>>> http://code.google.com/p/wrapitk/wiki/Release030#Wrapping_process_re-design
>>>
>>>>
>>>> On 11/19/09, Mario Ceresa <mrceresa at gmail.com> wrote:
>>>>> Hello José,
>>>>> I use a lot the bindings done with WrapITK. You might want to
>>>>> download
>>>>> it from google-code, as it is newer than the one that ships with ITK.
>>>>>
>>>>> Here you can find some benchmarks that might be of interest:
>>>>>
>>>>> http://code.google.com/p/wrapitk/wiki/Release030#Python
>>>>>
>>>>> Feel free to ask again should you have any more questions.
>>>>>
>>>>> Regards,
>>>>>
>>>>> Mario
>>>>>
>>>>>
>>>>>
>>>>> 2009/11/19 Lic. José M. Rodriguez Bacallao <jmrbcu at gmail.com>:
>>>>>> hi folks, I have some questions about using itk and python. I am
>>>>>> developing a medical image application using mainly python, PyQt4,
>>>>>> vtk
>>>>>> and wish to use itk. With python and vtk I got no problems but I
>>>>>> really wish to use itk from python but I need some clarification:
>>>>>>
>>>>>> 1- How good are itk python wrappers (performance, memory
>>>>>> consumption, etc)
>>>>>> 2- Which of the available wrappers to use, the one from
>>>>>> code.google.com (WrapITK), WrapITK from itk itself or other?
>>>>>> 3- Which are the differences from WrapITK from code.google.com and
>>>>>> WrapITK from itk.
>>>>>>
>>>>>>
>>>>>> --
>>>>>> Lic. José M. Rodriguez Bacallao
>>>>>> Centro de Biofisica Medica
>>>>>> -----------------------------------------------------------------
>>>>>> Todos somos muy ignorantes, lo que ocurre es que no todos
>>>>>> ignoramos lo
>>>>>> mismo.
>>>>>>
>>>>>> Recuerda: El arca de Noe fue construida por aficionados, el titanic
>>>>>> por profesionales
>>>>>> -----------------------------------------------------------------
>>>>>> _____________________________________
>>>>>> Powered by www.kitware.com
>>>>>>
>>>>>> Visit other Kitware open-source projects at
>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>
>>>>>> Kitware offers ITK Training Courses, for more information visit:
>>>>>> http://www.kitware.com/products/protraining.html
>>>>>>
>>>>>> Please keep messages on-topic and check the ITK FAQ at:
>>>>>> http://www.itk.org/Wiki/ITK_FAQ
>>>>>>
>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>> http://www.itk.org/mailman/listinfo/insight-users
>>>>>>
>>>>>
>>>>
>>>>
>>>> --
>>>> Lic. José M. Rodriguez Bacallao
>>>> Centro de Biofisica Medica
>>>> -----------------------------------------------------------------
>>>> Todos somos muy ignorantes, lo que ocurre es que no todos ignoramos
>>>> lo mismo.
>>>>
>>>> Recuerda: El arca de Noe fue construida por aficionados, el titanic
>>>> por profesionales
>>>> -----------------------------------------------------------------
>>>> _____________________________________
>>>> Powered by www.kitware.com
>>>>
>>>> Visit other Kitware open-source projects at
>>>> http://www.kitware.com/opensource/opensource.html
>>>>
>>>> Kitware offers ITK Training Courses, for more information visit:
>>>> http://www.kitware.com/products/protraining.html
>>>>
>>>> Please keep messages on-topic and check the ITK FAQ at:
>>>> http://www.itk.org/Wiki/ITK_FAQ
>>>>
>>>> Follow this link to subscribe/unsubscribe:
>>>> http://www.itk.org/mailman/listinfo/insight-users
>>>
>>> --
>>> Gaëtan Lehmann
>>> Biologie du Développement et de la Reproduction
>>> INRA de Jouy-en-Josas (France)
>>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>>> http://voxel.jouy.inra.fr  http://www.itk.org
>>> http://www.mandriva.org  http://www.bepo.fr
>>>
>>>
>>
>>
>> --
>> Lic. José M. Rodriguez Bacallao
>> Centro de Biofisica Medica
>> -----------------------------------------------------------------
>> Todos somos muy ignorantes, lo que ocurre es que no todos ignoramos lo
>> mismo.
>>
>> Recuerda: El arca de Noe fue construida por aficionados, el titanic
>> por profesionales
>> -----------------------------------------------------------------
>>
>
>
> --
> Lic. José M. Rodriguez Bacallao
> Centro de Biofisica Medica
> -----------------------------------------------------------------
> Todos somos muy ignorantes, lo que ocurre es que no todos ignoramos lo mismo.
>
> Recuerda: El arca de Noe fue construida por aficionados, el titanic
> por profesionales
> -----------------------------------------------------------------
>