[Insight-users] Problem compiling with ITK 3.16.0 in Linux
Bill Lorensen
bill.lorensen at gmail.com
Tue Oct 20 10:13:42 EDT 2009
I see the problem now.
You have an include file in your source tree:
/mia/itk/preprocesado tac pulmon/Codigo/src/itkPasteImageFilter.h:53: error:
but the .txx file is in the itk source tree:
/toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.txx:46:
Why do you have an itk file in your source tree? I suspect that the
version of the .h in your source tree does not correspond to the .txx
file in the itk tree.
Bill
2009/10/20 Alfonso Castro Martinez <alfonso.castro at udc.es>:
> The code that uses itk:PasteImageFilter:
>
> PasteFilterType::Pointer paster = PasteFilterType::New();
>
> WriterType::Pointer writerPaste = WriterType::New();
>
> PasteFilterType::InputImageIndexType destIndex;
>
> ImageIOType::Pointer gdcmImageIOPaste2 = ImageIOType::New();
>
> PasteFilterType::Pointer paster2 = PasteFilterType::New();
>
> WriterType::Pointer writerPaste2 = WriterType::New();
>
> PasteFilterType::InputImageIndexType destIndex2;
>
> PasteFilterType::Pointer getPaste(int indX, int indY){
> paster->SetDestinationImage(readerDEST->GetOutput());
> paster->SetSourceImage(readerSRC->GetOutput());
>
>
> destIndex[0] = indX;
> destIndex[1] = indY;
> paster->SetDestinationIndex( destIndex );
>
> paster->SetSourceRegion( readerSRC->GetOutput()-
>>GetLargestPossibleRegion());
>
> try
> {
> paster->Update();
> }
> catch( itk::ExceptionObject & excp )
> {
> std::cerr << "Exception thrown while pasting the Images" << std::endl;
> std::cerr << excp << std::endl;
> }
> return(paster);
> }
>
>
> void PasteImages(char *imGrande, char *imPeque, int indx, int indy, char
> *name){
> readerSRC=readSRC(imPeque);
> readerDEST=readDEST(imGrande);
> paster=getPaste(indx,indy);
> writerPaste=writePaste(paster,name);
> }
>
> The entire Paste.h:
>
> #include "itkImage.h"
> #include "itkImageFileReader.h"
> #include "itkImageFileWriter.h"
> #include "itkGDCMImageIO.h"
> #include "itkPasteImageFilter.h"
>
> void PasteImages(char *imGrande, char *imPeque, int indx, int indy, char
> *name);
> void PasteImages2(char *imGrande2, char *imPeque2, int indx2, int indy2, char
> *name2);
>
> The entire itkPasteImageFilter.h in the source directory of the application:
>
> #ifndef __itkPasteImageFilter_h
> #define __itkPasteImageFilter_h
>
> #include "itkInPlaceImageFilter.h"
> #include "itkSmartPointer.h"
>
> namespace itk
> {
>
> template <class TInputImage, class TSourceImage=TInputImage, class
> TOutputImage=TInputImage>
> class ITK_EXPORT PasteImageFilter:
> public InPlaceImageFilter<TInputImage,TOutputImage>
> {
> public:
> typedef PasteImageFilter Self;
> typedef InPlaceImageFilter<TInputImage,TOutputImage> Superclass;
> typedef SmartPointer<Self> Pointer;
> typedef SmartPointer<const Self> ConstPointer;
>
> itkNewMacro(Self);
>
> itkTypeMacro(PasteImageFilter, InPlaceImageFilter);
>
> typedef typename Superclass::InputImagePointer InputImagePointer;
> typedef typename Superclass::OutputImagePointer OutputImagePointer;
> typedef typename TSourceImage::Pointer SourceImagePointer;
> typedef typename TSourceImage::ConstPointer SourceImageConstPointer;
> typedef typename TOutputImage::RegionType OutputImageRegionType;
> typedef typename TInputImage::RegionType InputImageRegionType;
> typedef typename TSourceImage::RegionType SourceImageRegionType;
> typedef typename TOutputImage::PixelType OutputImagePixelType;
> typedef typename TInputImage::PixelType InputImagePixelType;
> typedef typename TSourceImage::PixelType SourceImagePixelType;
> typedef typename TOutputImage::IndexType OutputImageIndexType;
> typedef typename TOutputImage::SizeType OutputImageSizeType;
> typedef typename TInputImage::IndexType InputImageIndexType;
> typedef typename TInputImage::SizeType InputImageSizeType;
> typedef typename TSourceImage::IndexType SourceImageIndexType;
> typedef typename TSourceImage::SizeType SourceImageSizeType;
> itkStaticConstMacro(InputImageDimension, unsigned int,
> TInputImage::ImageDimension);
> itkStaticConstMacro(OutputImageDimension, unsigned int,
> TOutputImage::ImageDimension);
> itkStaticConstMacro(SourceImageDimension, unsigned int,
> TSourceImage::ImageDimension);
> itkSetMacro(DestinationIndex, InputImageIndexType);
> itkGetMacro(DestinationIndex, InputImageIndexType);
>
> itkSetMacro(SourceRegion, SourceImageRegionType);
> itkGetMacro(SourceRegion, SourceImageRegionType);
> void SetDestinationImage(TInputImage *dest) { this->SetNthInput(0, dest); }
> const TInputImage* GetDestinationImage() { return this->GetInput(0); }
> void SetSourceImage(TSourceImage *src) { this->SetNthInput(1, src); }
> const TSourceImage* GetSourceImage() { return this->GetInput(1); }
> virtual void GenerateInputRequestedRegion();
>
> protected:
> PasteImageFilter();
> ~PasteImageFilter() {};
> void PrintSelf(std::ostream& os, Indent indent) const;
> void ThreadedGenerateData(const OutputImageRegionType&
> outputRegionForThread,
> int threadId );
> SourceImageRegionType m_SourceRegion;
> InputImageIndexType m_DestinationIndex;
> private:
> PasteImageFilter(const Self&); //purposely not implemented
> void operator=(const Self&); //purposely not implemented
> };
>
> } // end namespace itk
> #ifndef ITK_MANUAL_INSTANTIATION
> #include "itkPasteImageFilter.txx"
> #endif
>
> #endif
>
>
> Thanks in advance.
>
> Alfonso Castro Martinez
> Dept. of Information and Communication Technologies
> University of A Coruna
> Spain
>
> O Luns 19 Outubro 2009 15:05:12 Bill Lorensen escribiu:
>> Can you show the statement in your code that uses the
>> itk::PasteImageFilter?
>>
>> Bill
>>
>> 2009/10/19 Alfonso Castro Martinez <alfonsocastro at udc.es>:
>> > Thanks for your reply.
>> >
>> > We are using the class to join a TAC separated in two images: left lobe
>> > and right lobe.
>> >
>> > The error is in a include file: Paste.h in our source:
>> >
>> > #include "itkImage.h"
>> > #include "itkImageFileReader.h"
>> > #include "itkImageFileWriter.h"
>> > #include "itkGDCMImageIO.h"
>> > #include "itkPasteImageFilter.h"
>> >
>> > void PasteImages(char *imGrande, char *imPeque, int indx, int indy, char
>> > *name);
>> > void PasteImages2(char *imGrande2, char *imPeque2, int indx2, int indy2,
>> > char *name2);
>> >
>> > From there the message error comes from itkPasteImageFilter.txx in the
>> > source directory of ITK in line 46, the code in this position:
>> >
>> > template <class TInputImage, class TSourceImage, class TOutputImage>
>> > void
>> > PasteImageFilter<TInputImage,TSourceImage,TOutputImage>
>> >
>> > ::SetSourceImage(const SourceImageType *src)
>> >
>> > {
>> > // Process object is not const-correct so the const casting is required.
>> > this->SetNthInput(1, const_cast<SourceImageType *>( src ));
>> > }
>> >
>> >
>> > Thanks in advance.
>> >
>> > Alfonso Castro Martinez
>> > Dept. of Information and Communication Technologies
>> > University of A Coruna
>> > Spain
>> >
>> > O Venres 16 Outubro 2009 05:55:09 escribiches:
>> >> Luis,
>> >>
>> >> Perhaps the const correctness changes you made to itkPasteImageFilter
>> >> are not bacward compatible?
>> >>
>> >> Alfonso,
>> >>
>> >> How are you using this class? Our intent is to not break backward
>> >> compatibility.
>> >>
>> >> Bill
>> >>
>> >> 2009/10/14 Alfonso Castro Martinez <alfonsocastro at udc.es>:
>> >> > Hi.
>> >> >
>> >> > I have a program to preprocess lung TACs made with ITK. I don't have
>> >> > problems compiling this program in OpenSuSE 11.1 x86_64 with ITK
>> >> > 3.12.0 but when I compile it with ITK 3.16.0. I obtain the next error:
>> >> >
>> >> > /toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.
>> >> >txx
>> >> >
>> >> >:46: error: expected ‘,’ or ‘...’ before ‘*’ token
>> >> >
>> >> > /toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.
>> >> >txx
>> >> >
>> >> >:46: error: ISO C++ forbids declaration of ‘SourceImageType’ with no
>> >> >: type
>> >> >
>> >> > /toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.
>> >> >txx
>> >> >
>> >> >:46: error: prototype for ‘void itk::PasteImageFilter<TInputImage,
>> >> >
>> >> > TSourceImage, TOutputImage>::SetSourceImage(int)’ does not match any
>> >> > in class
>> >> > ‘itk::PasteImageFilter<TInputImage, TSourceImage, TOutputImage>’
>> >> > /mia/itk/preprocesado tac pulmon/Codigo/src/itkPasteImageFilter.h:53:
>> >> > error: candidate is: void itk::PasteImageFilter<TInputImage,
>> >> > TSourceImage, TOutputImage>::SetSourceImage(TSourceImage*)
>> >> > /toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.
>> >> >txx
>> >> >
>> >> >:55: error: prototype for ‘const typename
>> >> >
>> >> > itk::PasteImageFilter<TInputImage, TSourceImage,
>> >> > TOutputImage>::SourceImageType*
>> >> > itk::PasteImageFilter<TInputImage, TSourceImage,
>> >> > TOutputImage>::GetSourceImage() const’ does not match any in class
>> >> > ‘itk::PasteImageFilter<TInputImage, TSourceImage, TOutputImage>’
>> >> > /mia/itk/preprocesado tac pulmon/Codigo/src/itkPasteImageFilter.h:54:
>> >> > error: candidate is: const TSourceImage*
>> >> > itk::PasteImageFilter<TInputImage, TSourceImage,
>> >> > TOutputImage>::GetSourceImage()
>> >> > /toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.
>> >> >txx
>> >> >
>> >> >:65: error: expected ‘,’ or ‘...’ before ‘*’ token
>> >> >
>> >> > /toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.
>> >> >txx
>> >> >
>> >> >:65: error: ISO C++ forbids declaration of ‘InputImageType’ with no
>> >> >: type
>> >> >
>> >> > /toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.
>> >> >txx
>> >> >
>> >> >:65: error: prototype for ‘void itk::PasteImageFilter<TInputImage,
>> >> >
>> >> > TSourceImage, TOutputImage>::SetDestinationImage(int)’ does not match
>> >> > any in class ‘itk::PasteImageFilter<TInputImage, TSourceImage,
>> >> > TOutputImage>’ /mia/itk/preprocesado tac
>> >> > pulmon/Codigo/src/itkPasteImageFilter.h:51: error: candidate is: void
>> >> > itk::PasteImageFilter<TInputImage,
>> >> > TSourceImage, TOutputImage>::SetDestinationImage(TInputImage*)
>> >> > /toolkits/InsightToolkit-3.16.0/Code/BasicFilters/itkPasteImageFilter.
>> >> >txx
>> >> >
>> >> >:74: error: prototype for ‘const typename
>> >> >
>> >> > itk::PasteImageFilter<TInputImage, TSourceImage,
>> >> > TOutputImage>::InputImageType*
>> >> > itk::PasteImageFilter<TInputImage, TSourceImage,
>> >> > TOutputImage>::GetDestinationImage() const’ does not match any in
>> >> > class ‘itk::PasteImageFilter<TInputImage, TSourceImage, TOutputImage>’
>> >> >
>> >> > Can some help me, please?
>> >> >
>> >> > Thanks in advance.
>> >> >
>> >> > Alfonso Castro Martinez
>> >> > Dept. of Information and Communication Technologies
>> >> > University of A Coruna
>> >> > Spain
>> >> > _____________________________________
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