[Insight-users] Wrapping of new label processing filters

[Gaëtan Lehmann]

Hi Lassi,

The wrappers for that contrib are not in WrapITK 0.3. You have to  
check out wrapitk from the svn repository to use them. Be sure to also  
use a fresh ITK cvs check out to avoid build errors.

I'm thinking to release wrapitk 0.4 when ITK 3.18 will be out.

Unfortunately, all the classes from the contribution have not been  
included in ITK, so you still have to build the contrib as an external  
project to get all the filters.

The latest version can be found at

   http://mima2.jouy.inra.fr/darcs/contrib-itk/binaryAttributeMorphology/binaryAttributeMorphology.tar.gz

Regards,

Gaëtan


Le 26 janv. 10 à 23:23, Lassi Paavolainen a écrit :

> Hi,
>
> Where can I find working wrap_itk*.cmake files for new label  
> processing filters available in ITK 3.16 for wrapping in WrapITK  
> 0.3? Those aren't in ITK 3.16 nor in CVS head. I have used those  
> files from Gaetan's Insight Journal article: http://insight-journal.org/browse/publication/176
> but to get those to work I need to remove about 10 cmake files or I  
> get errors like this:
> /home/lopaavol/ITK/wrapitk-0.3.0/Libraries/Review/ 
> wrap_itkBinaryClosingByReconstructionImageFilter.cxx:20:57: error:  
> itkBinaryClosingByReconstructionImageFilter.h: No such file or  
> directory
> /home/lopaavol/ITK/wrapitk-0.3.0/Libraries/Review/ 
> wrap_itkBinaryClosingByReconstructionImageFilter.cxx:30: error:  
> expected initializer before '<' token
>
> Have I just forgot to set some cmake parameter or are those cmake  
> files outdated for WrapITK 0.3 and latest label filters?
>
> Reason for doing this again and not being satisfied with the version  
> I already had (build correctly after removing about 10 of those  
> cmake files), is that I get following error in Python:
>
> import itk
> Dimension = 2
> LabelObjectType = itk.StatisticsLabelObject[itk.UL, Dimension]
> Warning: Unknown parameter 'itk::LabelMap<  
> itk::StatisticsLabelObject< unsigned long, 2 > >' in template  
> 'itk::ImageSource'
> Warning: Unknown parameter 'itk::LabelMap<  
> itk::StatisticsLabelObject< unsigned long, 3 > >' in template  
> 'itk::ImageSource'
> ...
> LabelMapType = itk.LabelMap[LabelObjectType]
> Traceback (most recent call last):
>  File "<stdin>", line 1, in <module>
>  File "/usr/local/lib/InsightToolkit/WrapITK/Python/itkTemplate.py",  
> line 212, in __getitem__
>    raise KeyError, 'itkTemplate : No template %s for the %s class' %  
> (str(parameters), self.__name__)
> KeyError: "itkTemplate : No template [<class  
> 'itkStatisticsLabelObjectPython.itkStatisticsLabelObjectUL2'>] for  
> the itk::LabelMap class"
>
> Everything works if I define type of those filters manually but I  
> really don't want to add bunch of ifs in my code as it should work  
> automatically.
>
> Cheers,
> Lassi
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-- 
Gaëtan Lehmann
Biologie du Développement et de la Reproduction
INRA de Jouy-en-Josas (France)
tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
http://voxel.jouy.inra.fr  http://www.itk.org
http://www.mandriva.org  http://www.bepo.fr

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