[Insight-users] ANNOUNCEMENT: ITK 3.20 RELEASED !

Andriy Fedorov fedorov at bwh.harvard.edu
Mon Jul 19 00:46:35 EDT 2010


Luis,

Thank you for the quick response! I guess I could fix this myself, but
I was not sure what are the rules of committing to the release
branch....

If you don't forget, please let me know when the update is propagated
to 3.20, so that I can update the Slicer code accordingly.

AF



On Mon, Jul 19, 2010 at 00:42, Luis Ibanez <luis.ibanez at kitware.com> wrote:
>
> Hi Andi,
>
> Thanks for reporting this oversight.
>
> I just committed a fix to the CVS HEAD:
>
> http://public.kitware.com/cgi-bin/viewcvs.cgi/Code/Common/itkTransformFactoryBase.cxx?root=Insight&r1=1.7&r2=1.8&sortby=date
>
>
> I will wait to see it Green in the continuous
> builds tomorrow, before I commit the same
> patch to the ITK 3.20 branch.
>
> No need to wait until a new release...
>
> All bug fixes will go into the ITK 3.20 branch,
> as we focus on ITKv4.
>
>
> Please let us know if you find any
> other problems,
>
>
>        Thanks
>
>
>             Luis
>
>
> ------------------------------------------------------------
> On Fri, Jul 16, 2010 at 2:25 PM, Andriy Fedorov <fedorov at bwh.harvard.edu>
> wrote:
>>
>> Luis,
>>
>> It appears that while the new release includes ScaleVersor3DTransform
>> in stable Code, this transform is not registered with the
>> TransformFactoryBase.
>>
>> Is this a bug? If yes, can we fix this in 3.20, or this has to wait
>> until the next release?
>>
>> We are using this type of transform in Slicer, and right now we need
>> to manually register the transform with the factory, we would like to
>> avoid this, since we also need to re-register all the rest of the
>> transforms when we add a new one.
>>
>> Please advice
>>
>> Andrey Fedorov
>>
>>
>>
>>
>> On Thu, Jul 15, 2010 at 12:00,  <insight-users-request at itk.org> wrote:
>> > Message: 2
>> > Date: Thu, 15 Jul 2010 09:18:09 -0400
>> > From: Luis Ibanez <luis.ibanez at kitware.com>
>> > Subject: [Insight-users] ANNOUNCEMENT: ITK 3.20 RELEASED !
>> > To: itk <Insight-users at itk.org>,        Insight Developers
>> >        <Insight-developers at itk.org>
>> > Message-ID:
>> >        <AANLkTinR1hYeqYo2bzrMjNIDQ2S4GBbNS59ZxrKd1J1E at mail.gmail.com>
>> > Content-Type: text/plain; charset="iso-8859-1"
>> >
>> > We are pleased to announce the release of
>> >
>> >
>> >                       ITK 3.20
>> >
>> >
>> > Source files and download instructions are available at
>> > http://itk.org/ITK/resources/software.html
>> >
>> >
>> > The list of new files can be found at:
>> > http://www.itk.org/Wiki/ITK_Release_3.20
>> >
>> >
>> > The list of changed files can be found at:
>> > http://www.itk.org/Wiki/ITK_Release_3.20_Changed_From_Previous
>> >
>> >
>> >
>> >    Please let us know if you find any problems.
>> >
>> >
>> >         Thanks
>> >
>> >
>> >               Luis
>> > -------------- next part --------------
>> > An HTML attachment was scrubbed...
>> > URL:
>> > <http://www.itk.org/pipermail/insight-users/attachments/20100715/936af08b/attachment-0001.htm>
>> >
>> > ------------------------------
>> >
>> > Message: 3
>> > Date: Thu, 15 Jul 2010 09:46:15 -0400
>> > From: Luis Ibanez <luis.ibanez at kitware.com>
>> > Subject: [Insight-users] ITK 3.20 --> ITK 4.0 Transition Plan : ITK :
>> >        CVS     --> Git
>> > To: itk <Insight-users at itk.org>,        Insight Developers
>> >        <Insight-developers at itk.org>
>> > Message-ID:
>> >        <AANLkTin1AHPsPB9PKJhqdmD5BplfOeLBy9AqEfZLxfP6 at mail.gmail.com>
>> > Content-Type: text/plain; charset="iso-8859-1"
>> >
>> > As many of you may know, we are working on
>> > a major new version of ITK:
>> >
>> >
>> >                    This will be ITKv4.
>> >
>> >
>> >
>> > The main goals for ITKv4 are:
>> >
>> >        (1)  Revising,
>> >        (2)  Accelerating,
>> >        (3)  Simplifying and
>> >        (4)  Improving DICOM support in ITK.
>> >
>> >
>> > To that end we have drafted a Transition Plan to go
>> > from ITK 3.20 to ITKv4.  The current form of this plan
>> > is available in the Wiki page:
>> >
>> > http://www.itk.org/Wiki/ITK_Release_4/Migration_Plan
>> >
>> >
>> > A schematic representation of th plan is available at:
>> >
>> > http://www.itk.org/Wiki/File:ITKv4-TransitionPlanProposal.png
>> >
>> >
>> >
>> > The intermediate Phases of the Transition Plan
>> > have been sketched out in
>> >
>> > http://www.itk.org/Wiki/ITK_Release_4/Migration_Plan/Phases
>> >
>> > an equivalent document is available at:
>> > http://www.itk.org/Wiki/images/5/5c/ITKv4-TransitionPlan-Draft.pdf
>> >
>> >
>> >
>> > Please share with us your impression on how
>> > the current transition plan may impact your use
>> > of ITK.
>> >
>> >
>> > ---
>> >
>> >
>> > At this point, we have executed:
>> >
>> > * Release of ITK 3.20 : July 15th
>> >
>> > We are now in the process of:
>> >
>> > * Porting ITK from CVS to Git.
>> >
>> > As we move to Git, a lot of effort is being invested
>> > in preserving the CVS history.
>> >
>> > We anticipate that ITK-Git will be settle by the end of July.
>> >
>> >
>> > It is therefore a good moment for you to start learning Git.  :-)
>> >
>> > Resources are available at:
>> > http://git-scm.com/documentation
>> >
>> > We recommend that you start by watching this talk
>> > that Linus Torvals gave at Google:
>> >
>> > http://www.youtube.com/watch?v=4XpnKHJAok8
>> >
>> > Then follow up with the official Git tutorial
>> >
>> > http://www.kernel.org/pub/software/scm/git/docs/gittutorial.html
>> >
>> > ( but, please note that there are many other
>> >    resources available for learning Git )
>> >
>> >
>> > --
>> >
>> >
>> > We will appreciate any suggestions on how to
>> > improve the Transition Plan, and how to minimize
>> > the effort that users will have to invest for migrating
>> > to ITKv4.
>> >
>> >
>> >
>> >
>> >     Thanks
>> >
>> >
>> >
>> >           Luis
>> > -------------- next part --------------
>> > An HTML attachment was scrubbed...
>> > URL:
>> > <http://www.itk.org/pipermail/insight-users/attachments/20100715/7184d3d1/attachment-0001.htm>
>> >
>> > ------------------------------
>> >
>> > Message: 4
>> > Date: Thu, 15 Jul 2010 15:06:06 +0000 (UTC)
>> > From: Matt McCormick <matt at mmmccormick.com>
>> > Subject: Re: [Insight-users] ITK 3.20 --&gt; ITK 4.0 Transition Plan :
>> >        ITK : CVS       --&gt; Git
>> > To: insight-users at itk.org
>> > Message-ID: <loom.20100715T170213-434 at post.gmane.org>
>> > Content-Type: text/plain; charset=us-ascii
>> >
>> > Luis Ibanez <luis.ibanez at ...> writes:
>> > Porting ITK from CVS to Git.As we move to Git, a lot of effort is being
>> > invested
>> > in preserving the CVS history.We anticipate that ITK-Git will be settle
>> > by the
>> > end of July.
>> >
>> > Huge commendations for making this change!  It is very exciting.  It
>> > will make
>> > doing development with and for ITK much easier.
>> >
>> > Matt
>> >
>> >
>> >
>> > ------------------------------
>> >
>> > Message: 5
>> > Date: Thu, 15 Jul 2010 08:29:37 -0700 (PDT)
>> > From: yasser salman <yass71 at yahoo.com>
>> > Subject: [Insight-users] Fw:  Mesh generation
>> > To: Luis Ibanez <luis.ibanez at kitware.com>
>> > Cc: insight-users at itk.org
>> > Message-ID: <594694.20826.qm at web50601.mail.re2.yahoo.com>
>> > Content-Type: text/plain; charset="iso-8859-1"
>> >
>> >
>> >
>> > Hi Luis,
>> >
>> > I have a MRI brain volume, i wanna to do that:
>> > 1- Extract the Brain only from the volume.??
>> > 2- Segment Brain to Gray / White matter/ ?CFS.? (may be tumor in the
>> > future will
>> > be considered)
>> > 3- Output this segmented volume to FEM (Ansys) .??
>> > Could you please let me know the shortcut to do that
>> > Regards,
>> > Yasser
>> >
>> >
>> >
>> >
>> >
>> > ________________________________
>> > From: Luis Ibanez <luis.ibanez at kitware.com>
>> > To: yasser salman <yass71 at yahoo.com>
>> > Cc: itk <Insight-users at itk.org>
>> > Sent: Sun, July 11, 2010 8:27:18 AM
>> > Subject: Re: [Insight-users] Mesh generation
>> >
>> >
>> > Hi Yasser,
>> >
>> > Do you need something more detailed than Skull-removal ?
>> >
>> > The first thing in MRI will be to evaluate whether
>> > you need bias-field correction or not.
>> >
>> > Please provide more details on what you are trying to achieve.
>> >
>> >
>> > ???? Thanks
>> >
>> >
>> > ?????????? Luis
>> >
>> >
>> >
>> > ------------------------------------------------------------------------------
>> >
>> > On Sun, Jul 11, 2010 at 11:20 AM, yasser salman <yass71 at yahoo.com>
>> > wrote:
>> >
>> > Hi Luis
>> >>
>> >>?MRI
>> >>Yasser
>> >>
>> >>
>> >>
>> >>
>> > ________________________________
>> > From: Luis Ibanez <luis.ibanez at kitware.com>
>> >>To: yasser salman <yass71 at yahoo.com>
>> >>Cc: itk <Insight-users at itk.org>
>> >>Sent: Sat, July 10, 2010 1:08:26 PM
>> >>Subject: Re: [Insight-users] Mesh generation
>> >>
>> >>
>> >>?Hi Yasser,
>> >>
>> > >From what image modality ?
>> >>
>> >>
>> >>????? Luis
>> >>
>> >>
>> >>----------------------------------------
>> >>
>> >>On Fri, Jul 9, 2010 at 6:43 PM, yasser salman <yass71 at yahoo.com> wrote:
>> >>
>> >>Dear Luis,
>> >>>i asking for an easy way to segment /extract the whole brain from head,
>> >>>is it by using threshold tech., depending on histogram?
>> >>>Regards ,
>> >>>Yasser
>> >>>
>> >>>
>> >>>
>> >>>
>> >>
>> >>
>> >
>> >
>> >
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>> >
>> > ------------------------------
>> >
>> > _______________________________________________
>> > Insight-users mailing list
>> > Insight-users at itk.org
>> > http://www.itk.org/mailman/listinfo/insight-users
>> >
>> >
>> > End of Insight-users Digest, Vol 75, Issue 26
>> > *********************************************
>> >
>
>


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