[Insight-users] simpleitk error

[Raghuram.O.S.]

I upgraded ipython to 0.12. Now it works. Thanks a lot Matt!

On Wed, Dec 21, 2011 at 10:20 PM, Raghuram.O.S. <raghuramos1987 at gmail.com>wrote:

> Hi Matt,
>
> I'm using python version 2.6.5. But this was in an ipython console which
> is on version 0.10 .
>
>
> On Wed, Dec 21, 2011 at 10:02 PM, Matt McCormick <
> matt.mccormick at kitware.com> wrote:
>
>> Hi Onti,
>>
>> What version of Python are you using?  You will need 2.6 or better for
>> the required buffer protocol.
>>
>> Thanks,
>> Matt
>>
>> On Wed, Dec 21, 2011 at 7:44 PM, Raghuram.O.S. <raghuramos1987 at gmail.com>
>> wrote:
>> > Hi,
>> >
>> > I'm trying to use simpleitk. I need to add two images of same size and
>> > shape. i'm converting them to numpy arrays and adding to get a final
>> numpy
>> > array. When I try to convert that back to a simpleitk image i get this
>> > error.
>> >
>> > In [11]: imComb_0_2 = sitk.GetImageFromArray(npComb_0_2)
>> > ERROR: An unexpected error occurred while tokenizing input
>> > The following traceback may be corrupted or invalid
>> > The error message is: ('EOF in multi-line statement', (7061, 0))
>> >
>> >
>> ---------------------------------------------------------------------------
>> > TypeError                                 Traceback (most recent call
>> last)
>> >
>> > /home/ros/cpp_code/itkAdd/data/<ipython console> in <module>()
>> >
>> >
>> /media/sda5/home/ros/softwares/bio/SimpleITK/bin/SimpleITK-build/Wrapping/SimpleITK.pyc
>> > in GetImageFromArray(arr)
>> >     146     """Get a SimpleITK Image from a numpy array."""
>> >     147
>> > --> 148     return _SimpleITK._GetImageFromArray( arr )
>> >     149
>> >     150 class VectorBool(_object):
>> >
>> > TypeError: 'numpy.ndarray' does not have the buffer interface
>> >
>> > In [12]: imComb_0_2 = sitk.GetImageFromArray(npComb_0_2)
>> > ERROR: An unexpected error occurred while tokenizing input
>> > The following traceback may be corrupted or invalid
>> > The error message is: ('EOF in multi-line statement', (7061, 0))
>> >
>> >
>> ---------------------------------------------------------------------------
>> > TypeError                                 Traceback (most recent call
>> last)
>> >
>> > /home/ros/cpp_code/itkAdd/data/<ipython console> in <module>()
>> >
>> >
>> /media/sda5/home/ros/softwares/bio/SimpleITK/bin/SimpleITK-build/Wrapping/SimpleITK.pyc
>> > in GetImageFromArray(arr)
>> >     146     """Get a SimpleITK Image from a numpy array."""
>> >     147
>> > --> 148     return _SimpleITK._GetImageFromArray( arr )
>> >     149
>> >     150 class VectorBool(_object):
>> >
>> > TypeError: 'numpy.ndarray' does not have the buffer interface
>> >
>> >
>> > Can somebody help me with this? Thank you.
>> >
>> > --
>> > Regards,
>> > Onti
>> >
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>
>
>
> --
> Regards,
> Onti
>



-- 
Regards,
Onti
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