[Insight-users] Wrapping R with SimpleITK

Bradley Lowekamp blowekamp at mail.nih.gov
Sat Dec 31 13:11:36 EST 2011


Hello Brandon,

The particular files you looking for are in the SimpleITK source directory not the build. You will need both the DESCRIPTION and the zzz.R files from the {SIMPLEITK_SOURCE}/Wrapping/R_Package directory.

We have been calling R a Tier 2 or Tier 3 language in SimpleITK because is not as well supported as the other wrapped languages such as Python, Java, CSharp or even Ruby, or TCL. The primary reason for this is that we have not gotten the automatic testing working for R, so that it will show up on the nightly dashboard. Additionally, we also are hoping for contribution from the community to get the R language specific features polished and up to the expected R standard conventions.

I hope this helps you with getting SimpleITK working R,

Brad

========================================================
Bradley Lowekamp  
Medical Science and Computing for
Office of High Performance Computing and Communications
National Library of Medicine 
blowekamp at mail.nih.gov

On Dec 31, 2011, at 9:28 AM, Brandon Whitcher wrote:

> Dear ITK/SimpleITK experts,
> 
> I have installed SimpleITK by turning off all wrapping facilities except WRAP_R.  I am now following the instructions in
> 
> http://www.itk.org/SimpleITKDoxygen/html/Wrapping.html
> 
> Specifically, 
> 
> 6) Copy the file
>        SimpleITK/Wrapping/R_Package/DESCRIPTION
> into the current
> 
>        SimpleITK/DESCRIPTION
> ...but I cannot find the file Wrapping/R_package/DESCRIPTION in my SimpleITK-binary installation.  Where is this file?
> 
> thank-you,
> 
> Brandon
> 
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