[Insight-users] Speed
Gib Bogle
g.bogle at auckland.ac.nz
Wed Feb 9 16:45:37 EST 2011
I've tried BoxMeanImageFilter (which I note was contributed by Richard Beare).
Indeed it is much faster, in fact it took just 43 sec for my test image - a bit
more than twice as fast as my code. It uses all the CPU cores. It also uses a
lot of memory, and when I try a test with an image of twice the size (200 frames
instead of 100) I'm told "This application has requested the Runtime to
terminate it in an unusual way." I think it runs out of memory (I have only 4GB
in this machine). I guess each thread is requesting a big chunk of memory.
I'm intrigued by the way these ITK filters automatically utilize multiple
processors, and I'm wondering if there is a way to set the number of threads
that will be invoked. No doubt there's an IJ article on this topic ..
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