[Insight-users] VNL 1.14 and ITK 3.20

[francois rousseau]

Would it be possible to avoid the compilation of the FEM module ?

françois


On May 24, 2011, at 4:25 PM, Bill Lorensen wrote:

> The VXL folks made a non backward-compatible change to their API. The
> following change has been made in ITKv4, but not ITK3.20.
> 
> 
> In itkFEMLinearSystemWrapperVNL.cxx
> go to the error line and replace it with the following:
> 
> #if VXL_VERSION_MAJOR == 1 && VXL_VERSION_MINOR == 9
> ((*m_Matrices)[LeftMatrixIndex])->mult(
> *((*m_Matrices)[RightMatrixIndex]),
> *((*m_Matrices)[ResultMatrixIndex]) );
> #else
> *((*m_Matrices)[ResultMatrixIndex]) =
> *((*m_Matrices)[LeftMatrixIndex]) * ( *((*m_Matrices)[RightMatrixIndex]));
> #endif
> 
> On Tue, May 24, 2011 at 8:46 AM, Estanislao Oubel <stan.oubel at gmail.com> wrote:
>> Hi all,
>> 
>> I'd like to use VNL 1.14 with ITK 3.20 because the vnl_sparse_matrix
>> includes several
>> useful methods absent in the VNL version included in ITK 3.20
>> (sparse matrix multiplication for example)
>> 
>> I've set ITK_USE_SYSTEM_VXL to ON but I get some compilation errors:
>> 
>> [100%] [100%] [100%] Building CXX object
>> Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/itkFEMUtility.o
>> Building CXX object
>> Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/itkFEMInitialization.o
>> Building C object Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/dsrc2c.o
>> /home/miv/oubel/lib/vxl-1.14.0/core/vnl/vnl_sparse_matrix.h: In member
>> function ‘virtual void
>> itk::fem::LinearSystemWrapperVNL::MultiplyMatrixMatrix(unsigned int,
>> unsigned int, unsigned int)’:
>> /home/miv/oubel/lib/vxl-1.14.0/core/vnl/vnl_sparse_matrix.h:268: error:
>> ‘void vnl_sparse_matrix<T>::mult(const vnl_sparse_matrix<T>&,
>> vnl_sparse_matrix<T>&) const [with T = double]’ is protected
>> /home/miv/oubel/lib/InsightToolkit-3.20.0/Code/Numerics/FEM/itkFEMLinearSystemWrapperVNL.cxx:265:
>> error: within this context
>> make[2]: ***
>> [Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperVNL.o]
>> Erreur 1
>> make[2]: *** Attente des tâches non terminées....
>> make[1]: *** [Code/Numerics/FEM/CMakeFiles/ITKFEM.dir/all] Erreur 2
>> make[1]: *** Attente des tâches non terminées....
>> Linking CXX shared library ../../bin/libITKIOReview.so
>> [100%] Built target ITKIOReview
>> Linking CXX executable ../../bin/itkTestDriver
>> [100%] Built target itkTestDriver
>> make: *** [all] Erreur 2
>> 
>> Am I doing anything wrong? Have you found similar problems?
>> 
>> Best
>> 
>> stan
>> 
>> 
>> 
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> _____________________________________
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> 
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--
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Francois Rousseau
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email : rousseau at unistra.fr
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