[Insight-users] ITK V4.0.0 with Python Wrapping

[Gaëtan Lehmann]

Le 10 févr. 12 à 08:57, Mathieu Stumpf a écrit :

> Le jeudi 09 février 2012 à 10:14 +0100, Mathieu Stumpf a écrit :
>> Le jeudi 09 février 2012 à 09:55 +0100, Gaëtan Lehmann a écrit :
>>>> Now I tried again with the git version, but the result seems the  
>>>> same.
>>>>
>>>> My env :
>>>>       export ITKWRAPPEDINSTALLED=/usr/local/lib/cmake/ITK-4.1/
>>>> WrapITK/
>>>>       export LD_LIBRARY_PATH=$ITKWRAPPEDINSTALLED:
>>>> $ITKWRAPPEDINSTALLED/WrapITK/lib:/usr/local/lib/vtk-5.8/
>>>>       export PYTHONPATH=$ITKWRAPPEDINSTALLED/WrapITK/lib/:
>>>> $ITKWRAPPEDINSTALLED/WrapITK/Python/
>>>>
>>>
>>> You shouldn't have all those paths. I'm even quite sure they are not
>>> correct, like
>>>
>>>   /usr/local/lib/cmake/ITK-4.1/WrapITK/WrapITK/lib
>>>
>>> Note the double WrapITK, and the absence of any lib in /usr/local/ 
>>> lib/
>>> cmake/ITK-4.1/
>>
>> Right, but I have no idea which paths I should provide. If I knew the
>> lib's name the wrapper need, I could make a `whereis`/`find`. Do you
>> know this information ?
>>
>>
>
> Anyone to help me on this ? If the problem is just the path it would  
> be
> great provided that someone would be able to tell me which path give  
> to
> my env variables.
>
> Joined with this mail is a complete list of files that my ITK builds
> (stable&git) installed.
>
> I hope it provide enough information, so someone can give me the  
> correct
> path, and — hopefully – I can go ahead and code.


Hi Mathieu,

Using the following two commands should be enough:

   export PYTHONPATH=/usr/local/lib/ITK-4.1/Python
   export LD_LIBRARY_PATH=/usr/local/lib

then

   python -c "import itk; itk.force_load()"

should exist without error (maybe still the warning about  
PySwigIterator, but nothing much.

Please let us know how it works.

Regards,

Gaëtan

-- 
Gaëtan Lehmann
Biologie du Développement et de la Reproduction
INRA de Jouy-en-Josas (France)
tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
http://mima2.jouy.inra.fr  http://www.itk.org
http://www.bepo.fr

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