[Insight-users] bioformats

Cagatay Bilgin bilgincc at gmail.com
Mon Jul 30 15:29:03 EDT 2012


Hello everyone,

I am trying to build bioformats but couldn't succeed yet.

The first document I tried was the following one
http://www.vtk.org/Wiki/ITK_Release_4/Microscopy/File_Formats/Bio-Formats
The document mentions bf-cpp directory which
does not exist in the bioformats directory anymore.
I see a bf-itk-pipe directory though.

The second document I tried is
http://loci.wisc.edu/bio-formats/itk
which I was able to compile and configure
as suggested but failed to read/write ics/stk files
at the end of the day.

Are there any up-to-date pointers on how to compile
and configure bioformats for ITK ?

Thank you,
Cagatay
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