[Insight-users] VS 2010 assertion error after modifying DeformableRegistration15

Bill Lorensen bill.lorensen at gmail.com
Tue Mar 20 13:00:09 EDT 2012


What error message do you see?

On Tue, Mar 20, 2012 at 9:28 AM, Tim Bhatnagar <tim.bhatnagar at gmail.com> wrote:
> Hello all,
>
> I am trying to modify the deformable registration metric to take a mask-file
> as an input region:
>
> // begin code snippet
>
> typedef itk::ImageMaskSpatialObject< Dimension >   MaskType;
>
>   MaskType::Pointer  spatialObjectMask = MaskType::New();
>
>   typedef itk::Image< unsigned char, Dimension >   ImageMaskType;
>
>   typedef itk::ImageFileReader< ImageMaskType >    MaskReaderType;
>
>   MaskReaderType::Pointer  maskReader = MaskReaderType::New();
>
>   maskReader->SetFileName( argv[3] );
>
>   try
>     {
>     maskReader->Update();
>     }
>   catch( itk::ExceptionObject & err )
>     {
>     std::cerr << "ExceptionObject caught !" << std::endl;
>     std::cerr << err << std::endl;
>     return EXIT_FAILURE;
>     }
>
>   spatialObjectMask->SetImage( maskReader->GetOutput() );
>
>   metric->SetFixedImageMask( spatialObjectMask );
>
> // end code snippet
>
> In the original deformableregistration15 code, these are the only following
> references to 'metric'
>
> /////////
> MetricType::Pointer         metric        = MetricType::New();
>
> registration->SetMetric(        metric        );
>
> metric->SetNumberOfHistogramBins( 50 );
>
> metric->ReinitializeSeed( 76926294 );
>
> metric->SetNumberOfSpatialSamples( 10000L ); /// for rigid registration
>
> metric->SetNumberOfSpatialSamples( 50000L ); /// for affine registration
>
> metric->SetNumberOfSpatialSamples( numberOfBSplineParameters * 100 ); ///
> for coarse b-spline reg.
>
> const unsigned long numberOfSamples =
>      static_cast<unsigned long>(
>        vcl_sqrt( static_cast<double>( numberOfBSplineParameters ) *
>                  static_cast<double>( numberOfPixels ) ) );
>   metric->SetNumberOfSpatialSamples( numberOfSamples ); /// for fine
> b-spline reg.
>
> ////////
>
> I hope this clearly outlines the problem.. I'm a relatively new ITK users
> and I'm still grappling with making small-ish changes to the pre-assembled
> algorithms.
>
> Any help is much appreciated,
>
>
>
> --
> Tim Bhatnagar
> PhD Candidate
> Orthopaedic Injury Biomechanics Group
> Department of Mechanical Engineering
> University of British Columbia
>
> Rm 5000 - 818 West 10th Ave.
> Vancouver, BC
> Canada
> V5Z 1M9
>
> Ph: (604) 675-8845
> Fax: (604) 675-8820
> Web: oibg.mech.ubc.ca
>
>
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