[Insight-users] Itk Segmentation Filter for nuclei

[Humayun Irshad]

ITK Experts,

I need to segment nuclei (specially mitosis nuclei) in H&E stained
histopathological images (see in attachment). I have seed points. I tried
ConfidenceConnectedImageFilter and FastMarchingImageFilter but it give poor
results. Most of the time, nuclei are under segment. Mitosis nuclei
are homogeneous and having variations in shape and size. Please suggest any
better segmentation filter.

-- 
-- 
Best Regards,

*HUMAYUN IRSHAD*
*
PhD student, University of Joseph Fourier, Grenoble, France
**
Research Engineer,
**
IPAL – Image & Pervasive Access Lab, Singapore
**
UMI CNRS (I2R/A*STAR, NUS, UJF, UPMC, IT)

Institute for Infocomm Research (I2R)
1 Fusionopolis Way
#10-19 Connexis South Tower
Singapore 138632
Tel:+65-65162864
Cell: +65-83851671

*
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