[Insight-users] [ANNOUNCE] ITK 4.4.0 has been released!
Panagiotis Foteinos
panagiotis.foteinos at gmail.com
Wed Jul 10 13:44:24 EDT 2013
Thank you for the reply.
It did not solve the problem, however. Same error.
Regards,
Panagiotis Foteinos
On Wed, Jul 10, 2013 at 1:16 PM, Bill Lorensen <bill.lorensen at gmail.com>wrote:
> When you specify the file, you should provide the full path to the file.
> The error says the file cannot be opened:
> full16_100um_2009b_sym.mnc
>
>
>
>
> On Wed, Jul 10, 2013 at 1:07 PM, Panagiotis Foteinos <
> panagiotis.foteinos at gmail.com> wrote:
>
>> Greetings.
>>
>> Glad to see that MINC is supported.
>>
>>
>> So, I enblabled MINC support and everything compiled nicely. Attempting
>> to read, however, a *.mnc file, yielded the following error:
>>
>>
>> ********************
>> /home/pfoteino/local/bin/itk-4.4.0-bin/release/Modules/ThirdParty/MINC/ITKMINC2_ExternalProject/libsrc2/volume.c:142
>> (from MINC2): Unable to open file 'full16_100um_2009b_sym.mnc'
>> ExceptionObject caught!
>>
>> itk::ExceptionObject (0x1fc2440)
>> Location: "unknown"
>> File:
>> /home/pfoteino/local/src/ITK-4.4.0/Modules/IO/ImageBase/src/itkImageIOBase.cxx
>> Line: 366
>> Description: itk::ERROR: MINCImageIO(0x1fc0cd0): Unknown component type: 0
>> ********************
>>
>> The MINC image I used was taken from the BigBrain project.
>>
>> Any suggestions?
>>
>>
>> Best Regards,
>> Panagiotis Foteinos
>>
>>
>> On Mon, Jun 3, 2013 at 5:06 PM, Matt McCormick <
>> matt.mccormick at kitware.com> wrote:
>>
>>> The InsightToolkit (ITK) 4.4.0 has been released!
>>>
>>> The 4.4 release is a major milestone that marks the hard work of many
>>> outstanding community members.
>>>
>>> Links to the Sourceforge.net tarballs can be found on the download page:
>>>
>>> http://www.itk.org/ITK/resources/software.html
>>>
>>>
>>> We will discuss what is new in 4.4.0 on Tuesday, June 11 at 3PM
>>> Eastern Time (GMT -5). To take part, join the “ITK BarCamp”
>>> GooglePlus Community, and join the “What’s New in Release 4.4.0”
>>> Event. A link to the YouTube live stream of the event will also be
>>> posted at
>>>
>>> http://www.itk.org/ITK/resources/webinars.html
>>>
>>>
>>> In summary:
>>>
>>> We are excited to announce two new ImageIO modules available in the
>>> main repository. The MINC ImageIO module provides a bridge to the
>>> MINC file format, a powerful medical imaging format used by the MINC
>>> library, another open source library with many features similar to
>>> ITK. The new MINC module, which has Image IO and Transform IO
>>> capabilities, is considered experimental and must be enabled by
>>> turning Module_ITKIOMINC ON in CMake’s configuration. This will
>>> automatically build the MINC library, which is now available on Mac,
>>> Linux, and Windows. The HDF5-based MINC2 file format is supported,
>>> but support for the NetCDF-based MINC1 file format is not supported
>>> because NetCDF is not distributed with ITK.
>>>
>>> Another new ImageIO module that expands the reach of ITK is the SCIFIO
>>> module. SCIFIO is a refactoring of the Bio-Formats library. This
>>> module provides access to a wide range of file formats encountered in
>>> life sciences/microscopy environments. This experimental feature is
>>> available a Remote module; to enable it, set the Fetch_SCIFIO CMake
>>> variable to ON. Many improvements and fixes are ongoing for this
>>> module; Git master is recommended for those interested in this module.
>>>
>>> A number of improvements were also made to DCMTK ImageIO, but this
>>> module remains experimental on disabled by default. To try DCMTK
>>> ImageIO support, turn the CMake option Module_ITKIODCMTK ON. For Unix
>>> platforms, the supporting DCMTK library will automatically be built as
>>> a CMake ExternalProject. On Windows, the DCMTK library must be built
>>> independently of the ITK build system. Then, specify the location to
>>> the external build after setting the CMake option ITK_USE_SYSTEM_DCMTK
>>> ON.
>>>
>>> A number of performance improvements were made to QuadEdgeMesh
>>> processing and memory copy functions. A new ImageScanlineIterator is
>>> available. This iterator can be used in many of the cases where an
>>> ImageRegionIterator is applied, but it has better performance.
>>>
>>> The approach to split image regions for parallel processing is no
>>> longer hard coded to make multiple options available.
>>>
>>> An API design change was started to improve the implied functionality
>>> of the GetObject methods. The non-const “GetObjectMacro” has been
>>> replaced with a “GetModifiableObjectMacro” that will result in a
>>> GetModifiableXXX method instead of a GetXXX method. This makes the
>>> non-const nature of the method and the circumvention of pipeline
>>> update semantics explicit for both the code author and those reading
>>> the class API. This was implemented in a backwards compatible way,
>>> and it will only be enforced if ITK_FUTURE_LEGACY_REMOVE is defined.
>>>
>>> Support for the Google Double Conversion library was added to improve
>>> the reading and writing of double values as ASCII text with the
>>> intention to improve the precision of the text transform file format’s
>>> serialization.
>>>
>>> It is now easier to identify filter inputs by both a string name or an
>>> integer index. The internal methods to store and retrieve inputs by
>>> either string or index was correspondingly refactored, and performance
>>> was also improved.
>>>
>>> JPEG ImageIO now writes and reads image spacing in a manner similar to
>>> the TIFF ImageIO.
>>>
>>> An extensive amount of code cruft was removed and coding style was
>>> made more consistent; ITK gets more stylish and classy with every
>>> release!
>>>
>>> The ExternalData method to store large testing data outside of the Git
>>> repository is now in upstream CMake 2.8.11. Our internal version has
>>> been updated to the improved version in CMake.
>>>
>>> The minimum CMake required version was bumped to 2.8.8 on Windows and
>>> 2.8.5 otherwise. This may be increased even higher in the near future
>>> to ensure all CMake features utilized operate correctly.
>>>
>>> Known assertion failures occur when compiled under Visual Studio in
>>> the Debug configuration. This will be fixed in 4.4.1. If this has a
>>> significant negative impact on your work, please consider contributing
>>> a Nightly dashboard build under this configuration. As previously
>>> scheduled, Visual Studio 2005 is no longer be supported.
>>>
>>> Support for building against system third party libraries continues to
>>> improve. Further improvements are expected for version 4.5.
>>>
>>> All tests are now passing again on the Nightly big-endian dashboard
>>> system.
>>>
>>> InsightApplications (ITKApps) has seen fixes in the FLTK superbuild
>>> and the TCL wrapped applications.
>>>
>>>
>>>
>>> Changes in ITK from v4.3.0 to v4.4.0 from the Git log:
>>>
>>> Ali Ghayoor (7):
>>> ENH: Get the internal transforms of SyN registration filter
>>> COMP: Fix all valid cppcheck warnings in "Module/Filtering"
>>> directory
>>> COMP: Fix all valid cppcheck warnings in "Module/Core" directory
>>> COMP: Fix all valid cppcheck warnings in "Module/Segmentation"
>>> directory
>>> COMP: Fix all valid cppcheck warnings in "Module/Registration"
>>> directory
>>> COMP: Fix all valid cppcheck warnings in ITK (last patch)
>>> COMP: Fix all valid cppcheck warnings in "ITK/Module" directory
>>>
>>> Arnaud Gelas (4):
>>> PERF: improve performance of couple of methods of
>>> itk::QuadEdgeMesh
>>> PERF: couple of speed up improvements for QuadEdgeMesh processing
>>> PERF: avoid doing GetPoint and SetPoint for the same point
>>> ENH: Simplify template parameters in itk::PointsLocator
>>>
>>> Bill Lorensen (20):
>>> ENH: Prevent duplicate loading of dynamic libraries
>>> COMP: Fix compile error in PhilipsRECImageIO
>>> COMP: Fix compile error in PhilipsRECImageIO
>>> BUG: Memory leak after failed RegisterFactory
>>> BUG: Warn on directories
>>> ENH: Refactor DoubleToString into NumberToString
>>> DOC: Escape hash in comment
>>> STYLE: Apply kwstyle to Modules/Core tests
>>> STYLE: Apply kwstyle to Modules/Filtering tests
>>> STYLE: Apply kwstyle to Modules/Segmentation tests
>>> STYLE: Apply kwstyle to Modules/IO tests
>>> STYLE: Apply kwstyle to Modules/Numerics tests
>>> STYLE: Apply kwstyle to Modules/Registration tests
>>> STYLE: Apply kwstyle to some tests
>>> BUG: Memory leak after failed RegisterFactory
>>> COMP: Remove copy_n wrapper for standard std::copy
>>> COMP: Make the test stable by removing random source
>>> COMP: More baselines
>>> COMP: Another baseline
>>> COMP: Missing return error after exception
>>>
>>> Brad King (14):
>>> BUG: ExternalData: Do not match directory names when resolving
>>> DATA{}
>>> STYLE: ExternalData: Cleanup stray TODO and typo in comments
>>> STYLE: ExternalData: Remove unused private interface
>>> ENH: ExternalData: Improve series matching using an explicit
>>> syntax
>>> ENH: ExternalData: Allow ()-groups in series match regex
>>> ENH: ExternalData: Allow DATA{} syntax to reference directories
>>> ENH: Configure new ExternalData series parsing for ITK baselines
>>> BUG: ExternalData: Collapse ../ components in DATA{} paths
>>> BUG: Fix "git gerrit-push" for content links with spaces
>>> STYLE: Add detail to the vxl update instructions
>>> STYLE: Add more detail to the vxl update instructions
>>> ENH: ExternalData: Partly generalize hash algo/ext handling
>>> ENH: ExternalData: Attach download rules to content links in IDEs
>>> ENH: ExternalData: Preserve escaped semicolons during argument
>>> expansion
>>>
>>> Bradley Lowekamp (78):
>>> STYLE: Use ITK_ prefix for FFTW cmake variables and defines
>>> BUG: Change default boundary condition to ZeroFlux
>>> ENH: wrapping itkImageSeriesWriter
>>> BUG: incorrect CMake variable for system jpeg include
>>> DOC: Correct description of Bitwise binary filters
>>> BUG: incorrect CMake variable for system jpeg include
>>> COMP: GetTimeVaryingVelocityField methods did not compile
>>> ENH: Creating templateless region splitter classes
>>> ENH: Adding image region splitter for separable filtering
>>> PERF: Do not spawn threads that will not be used.
>>> ENH: ImageIO's now use ImageRegionSplitter base
>>> COMP: Specify export for Specialized Array output operators
>>> ENH: making old ImageRegionSplitter compatible with new splitter
>>> BUG: initials Direction IVAR
>>> STYLE: never a space before;
>>> COMP: Address unused parameter warning in GPU code
>>> BUG: Do not create static initialized ITK objects
>>> ENH: Converted Multidimensional splitter to new base class
>>> ENH: moving old ImageRegionSplitter to Deprecated Module
>>> BUG: Only thread 0 should report progress.
>>> PERF: Use std::fill for image filling
>>> BUG: Only thread 0 should report progress in LabelMapFilters
>>> COMP: Adding missing header
>>> BUG: Using CMake variable in external builds with autoconf
>>> environment
>>> BUG: initialize InverseCovariance size with degenerate matrix
>>> ENH: Adding numeric_traits specializations for "long long"
>>> ENH: instantiate vnl types with "long long" on all platforms
>>> Revert "ENH: Use named inputs in BinaryReconstruction filters."
>>> BUG: initialize InverseCovariance size with degenerate matrix
>>> BUG: Using CMake variable in external builds with autoconf
>>> environment
>>> COMP: Address unused parameter warning in GPU code
>>> BUG: Only thread 0 should report progress in LabelMapFilters
>>> BUG: Only thread 0 should report progress.
>>> COMP: Adding missing header
>>> ENH: Adding support for instantiating long long pixel types
>>> BUG: VerifyPreconditions checks required named inputs
>>> PERF: Adding performance oriented ScanlineIterator
>>> COMP: Remove copy_n wrapper for standard std::copy
>>> COMP: Missing ProgressReporter header
>>> COMP: Suppress linker warning from fftw external project
>>> COMP: Add missing ImageRegionIterator header in test
>>> BUG: Don't allocate empty names in Get I/O Names methods
>>> COMP: Make GPUFunctorBase destructor virtual
>>> PERF: Changing filters to use ImageScanlineInterator
>>> COMP: GCC_XML external project does not use BUILD_EXAMPLES
>>> BUG: Scanline iterator in STAPLE filter not advanced to next line
>>> PERF: Use ImageScanlineIterator in ImageAlgorithm::Copy
>>> PERF: Use iterators into name map for index inputs
>>> ENH: index can be associated with required input
>>> PERF: Add global variable of index names in ProcessObject
>>> COMP: fix unused result warning in ProcessObject
>>> ENH: Remove names inputs specialized comparison
>>> DOC: Updated input methods doxygen
>>> PERF: Use ImageAlgorithm::Copy in JoinSeries filter
>>> PERF: Change default index i/o prefix to just "_"
>>> PERF: Use ImageAlgorithm::Copy in CastImageFilter
>>> COMP: Fix failing implicit conversion from NULL
>>> BUG: restore gnu aligned attribute
>>> PERF: ImageAlgorithm::copy to use std::copy for conversion
>>> PERF: Store indexed outputs in array for constant time access
>>> COMP: GCC_XML compilation error with type_traits
>>> BUG: Add unsigned int concept check to LabelVoting filter
>>> COMP: Disable conversion warning for std::copy in ImageAlgorithm
>>> BUG: Use correct types for TIFF Tags and buff math
>>> BUG: Use local var for TIFF va_list parameter
>>> BUG: Use correct bytes for BigEndian magic number
>>> COMP: Fix int to char narrowing error and warning
>>> COMP: Fix int to char narrowing error and warning
>>> COMP: Fix scanf conversion specification to %u
>>> COMP: Fix scanf conversion specification for id types
>>> BUG: Remove extraneous print statement in tiffio
>>> BUG: Incorrect va_arg type used in TIFF and LSM
>>> BUG: JPEG2000 bool type in C is now unsigned char
>>> BUG: add a test to demonstrate ThreadedIteratorPartitioner bug
>>> BUG: Fix written other magic number in FreeSurferBinaryMeshIO
>>> COMP: Fix assert in LSM, = in err of ==
>>> BUG: IteratorPartitioner extra thread don't advance
>>> BUG: C++ bool is 4 bytes on osx ppc
>>>
>>> Brian Helba (11):
>>> STYLE: Ensure documentation \author tags are parsed
>>> STYLE: Remove unnecessary overloads in favor of implicit
>>> conversion
>>> PERF: Replace deep copy with const const signature
>>> ENH: Re-enable LoadPrivateTags option in GDCMImageIO
>>> STYLE: Slightly refactor ImageFileWriter::Write to simplify logic
>>> ENH: Always enable Get*FromTag methods in GDCMImageIO
>>> DOC: Fix misspelling in MorphologyImageFilter
>>> DOC: Fix misspelling in ObjectMorphologyImageFilter
>>> STYLE: Remove unnecessary function call in GDCMImageIO
>>> STYLE: Remove calls to deprecated functionality from DICOM
>>> Examples / Tests
>>> ENH: Allow Get*FromTag to accept uppercase hex
>>>
>>> Cory Quammen (1):
>>> COMP: Bumped up minimum required CMake version
>>>
>>> Cyrille Faucheux (2):
>>> ENH: allow the ClampImageFilter to use user-defined bounds
>>> (#3016).
>>> ENH: Move the ClampImageFilter to the ImageIntensity module
>>> (#3016).
>>>
>>> David Cole (4):
>>> BUG: Avoid using def file when BUILD_SHARED_LIBS is off
>>> BUG: Do not undefine _WIN32_WINNT
>>> BUG: Avoid using def file when BUILD_SHARED_LIBS is off
>>> BUG: Do not undefine _WIN32_WINNT
>>>
>>> David Fuentes (2):
>>> ENH: Allow block matching on diff size images
>>> ENH: wrapping itkMaskFeaturePointSelectionFilter
>>> itkBlockMatchingImageFilter
>>>
>>> Dirk Padfield (6):
>>> BUG: CSVFileReader was reading all values as NaN
>>> DOC: Made AnisotropicDiffusion documentation consistent with code
>>> ENH: Enable MetaIO to read filenames with spaces using regex
>>> BUG: CSVFileReader was reading all values as NaN
>>> ENH: Added m_RequiredFractionOfOverlappingPixels to MaskedFFTNCC
>>> BUG: SignedMaurerDistanceMap in 4D
>>>
>>> Google double-conversion Maintainers (1):
>>> Google double-conversion (reduced)
>>>
>>> Hans Johnson (21):
>>> COMP: Remove unnecessary BORLAND code
>>> COMP: Make type conversions explicit/consistent
>>> PERF: Optimize loop index computations
>>> COMP: Remove unnecessary BORLAND code
>>> COMP: Incomplete variable name change.
>>> COMP: Incorrect warning presented for cppcheck
>>> STYLE: The FFTW libs should be co-located with ITK
>>> COMP: Fix robustness of DCMTK internal builds
>>> ENH: Get function accessible from const objects
>>> COMP: Missing patch for ITK_FUTURE_LEGACY_REMOVE
>>> STYLE: Reduce redundant code identified by cpd
>>> BUG: Return a modifiable object or provide const
>>> STYLE: Improve SoftwareGuide documentation
>>> COMP: Type mis-match for comparison operator
>>> STYLE: Enforce using ITK macros when available
>>> COMP: Type mis-match for comparison operator
>>> BUG: ITK_FUTURE_LEGACY_REMOVE must cmake configured
>>> BUG: Expose BSplineInterpolateImageFunction test
>>> COMP: Linkage ITK_ABI_EXPORT to ITKCommon_EXPORT
>>> BUG: itk_tiff.h should not be in itkTIFFImageIO.h
>>> DOC: Fix line length issues for the SoftwareGuide
>>>
>>> Ho Cheung (7):
>>> BUG: GradientVectorFlow should calculate timestep based on image
>>> dimension
>>> STYLE: GradientVectorFlow - Add const correctness
>>> STYLE: GradientVectorFlow
>>> PERF: GradientVectorFlow - Remove redundant initializations
>>> BUG: itkPolyLineParametricPath infinite loop for degenerate paths
>>> BUG: Fix ITK Path test failures
>>> BUG: ITK unable to detect number of threads under Unix in recent
>>> glibc.
>>>
>>> ITK Migration V4 (4):
>>> DOC: Modify ContourMeanDistanceImageFilter comments.
>>> DOC: Modify MattesMutualInformationImageToImageMetric comments.
>>> DOC: Modify MaskImageFilter comments.
>>> DOC: Modify BSplineTransformInitializer comments.
>>>
>>> Jan Margeta (1):
>>> COMP: Added missing header <functional> in
>>> itkAnchorCloseImageFilter.h
>>>
>>> Julien Finet (2):
>>> ENH: Add unit test to itkThresholdImageFilterTest
>>> ENH: Add MaskingValue to MaskImageFilter
>>>
>>> Julien Malik (2):
>>> BUG: Remove itkLoad definition in JPEG2000ImageIOFactory
>>> ENH: Add missing NumericTraits for complex
>>>
>>> Julien Michel (2):
>>> BUG: Fix InverseDisplacementFieldImageFilter bug
>>> BUG: Fix InverseDisplacementFieldImageFilter bug
>>>
>>> Kent Williams (21):
>>> COMP: Turn on -fpic in options for DCMTK External Project
>>> BUG: using InputPixelType to hold label count can overflow.
>>> COMP: Update DCMTK version to incorporate new fixes.
>>> COMP: Use portable method to find source dir & find DCMTK headers
>>> COMP: Start using ITKConsortium github to retrieve DCMTK.
>>> BUG: Regressions with respect to building DCMTK
>>> COMP: Added patch from Dirk Padfield
>>> ENH: use find_package(DCMTK NO_MODULE)
>>> ENH: Add double-conversion library for precise Float output
>>> COMP: replace in-line access methods with itk Macros
>>> COMP: The install path for DoubleConversion lib was wrong.
>>> COMP: removed warnings on Windows due to generic vs excp obj
>>> throw.
>>> COMP: check for this == &rhs as much as possible.
>>> COMP: Replace memcpy with std::copy in ImportImageContainer.
>>> COMP: Replace memcpy calls with std::copy
>>> COMP: Further changes to the use of std::copy_n
>>> COMP: Add preprocessor symbols to double-conversion for OS X PPC
>>> COMP: Add DoubleConversion merge from upstream documentation
>>> BUG: Return of NaN by DiffusionTensor3D::GetFractionalAnisotropy
>>> BUG: Dicom method for Dir Cosines made non-orthogonal directions
>>> COMP: Install openjpgDllConfig.h
>>>
>>> Kris Zygmunt (1):
>>> PERF: Provide better default config for patch-based denoiser
>>>
>>> Luis Ibanez (1):
>>> ENH: Maurer for Danielsson in Surface Distance.
>>>
>>> Manuel Grizonnet (4):
>>> BUG: Inconsistency detected by ld.so due to static const string
>>> BUG: Inconsistency detected by ld.so due to static const string
>>> BUG: Inconsistency detected by ld.so due to static const string
>>> BUG: Inconsistency detected by ld.so due to static const string
>>>
>>> Marco Feuerstein (1):
>>> ENH: JPEG IO now writes and reads spacing, similar to the TIFF
>>> IO (ITK-3023)
>>>
>>> Marius Staring (3):
>>> ENH: expose parameter in Bilateral filter
>>> PERF: Replace fill and copy with std alternatives
>>> BUG: B-spline interpolator should use direction
>>>
>>> Mark Hiner (1):
>>> ENH: Add SCIFIOImageIO.
>>>
>>> Matthew McCormick (47):
>>> COMP: Fix wrapping configuration warnings about itkMeshBase, etc.
>>> COMP: Fix HDF5 unused function for long long on Unix.
>>> ENH: Bump CMake version numbers to 4.4.0.
>>> BUG: Remove unused metric test content link.
>>> COMP: Add DLL to PATH for Python tests on Visual Studio.
>>> BUG: Do not nullify the DCMTK ExternalProject UPDATE_COMMAND.
>>> BUG: Fix DCMTK lib_prefix identification.
>>> COMP: Fix HDF5 unused function for long long on Unix.
>>> BUG: Remove unused metric test content link.
>>> COMP: Add DLL to PATH for Python tests on Visual Studio.
>>> ENH: Bump CMakeLists.txt ITK version to 4.3.1.
>>> STYLE: Fix errors detected by KWStyleCodeTest.
>>> COMP: VectorIndexSelectionCastImageFilter extra itk namespace.
>>> STYLE: Fix alignment in itkMask{Image,Negated}ImageFilter.h
>>> ENH: Doxygen configuration update to 1.8.3.1.
>>> BUG: Fix FFTW install paths in ITKConfig.cmake (ITK-2995).
>>> DOC: Doxygen detection of DirectionTolerance as private.
>>> ENH: Get Direction and CoordinateTolerance are const methods.
>>> BUG: Add missing header to the third party TIFF install.
>>> COMP: More fixes to mesh wrapping warnings.
>>> BUG: Temporarily disable Python utility tests.
>>> COMP: Avoid explicit instantiation and specialization for Array.
>>> ENH: Add utility script to create JRE tarballs.
>>> ENH: Use named inputs in BinaryReconstruction filters.
>>> STYLE: Remove redundant itk namespace.
>>> DOC: CreateTestDriver srcs should have the .cxx extension.
>>> COMP: Must reinterpret the pointers to match
>>> COMP: Fix project linking against ITK that does not use VtkGlue.
>>> COMP: Fix project linking against ITK that does not use VtkGlue.
>>> BUG: Fix FFTW install paths in ITKConfig.cmake (ITK-2995).
>>> ENH: Bump version in CMakeLists.txt to 4.3.2.
>>> DOC: Doxygen expansion of itkGetModifiableObjectMacro.
>>> ENH: Remove unused wrapping code. ITK-3032.
>>> ENH: Use named inputs in BinaryReconstruction filters.
>>> COMP: Distance maps filters cannot wrap 1D.
>>> DOC: Remove reference to MeanDistanceImageFilter.
>>> STYLE: Fix KWStyle errors.
>>> STYLE: Remove entries from the old MINC2ImageIO.
>>> BUG: Remove MINCIO from the default registered modules.
>>> BUG: Add EXCLUDE_FROM_ALL to ThirdParty/MINC.
>>> BUG: Include SCIFIO in the auto-registered factories if the
>>> module
>>> is enabled.
>>> BUG: Visual Studio itkClampImageFilterTest failures.
>>> STYLE: itkClampImageFilter.hxx in the wrong module.
>>> COMP: Add _CRT_NO_SECURE_WARNINGS when building GCCXML.
>>> COMP: Prevent ITK_USE_64BITS_IDS with Wrapping on Windows.
>>> STYLE: Too many blank lines in itkCastImageFilterTest.cxx.
>>> COMP: Bump MINC third party to fix warnings.
>>>
>>> Nick Tustison (4):
>>> ENH: Adding masking capabilities with confidence mask option.
>>> BUG: Masks need to be warped.
>>> ENH: Permitting access to shrinking per dimension.
>>> BUG: Valgrind error.
>>>
>>> Nicolas Rey (1):
>>> STYLE: Minor style fixes
>>>
>>> Paul Novotny (3):
>>> COMP: Fix TIFF on big endian systems
>>> COMP: Build fails with ITK_USE_SYSTEM_TIFF
>>> COMP: Fix TIFF on big endian systems
>>>
>>> Prathamesh Kulkarni (1):
>>> COMP: QuickViewTest new baseline.
>>>
>>> Sean McBride (4):
>>> STYLE: fixed minor spelling: XCode -> Xcode
>>> COMP: fixed clang warning about NULL to bool conversion
>>> BUG: Handle missing Analyze 7.5 flipped directions
>>> COMP: Handle missing Analyze 7.5 flipped directions
>>>
>>> Tim Allman (3):
>>> DOC: Modify BSplineTransform comments.
>>> DOC: Modify JointHistogramMutualInformationImageToImageMetricv4
>>> comments.
>>> DOC: Modify JointHistogramMutualInformationImageToImageMetricv4
>>> comments.
>>>
>>> Tom Vercauteren (2):
>>> COMP: GPUPDEDeformableRegistrationFilter.cl fails to "compile".
>>> COMP: GPUPDEDeformableRegistrationFilter.cl fails to "compile".
>>>
>>> Vladimir S. FONOV (2):
>>> ENH: Adding libminc and updating MINC IO support.
>>> BUG: Making 2D Minc IO work properly
>>>
>>> Xiaoxiao Liu (2):
>>> ENH: Sync python scripts with python3.
>>> ENH: Sync python scripts with python3.
>>>
>>> Yan Xu (1):
>>> COMP: static cast unsigned int to int
>>>
>>>
>>>
>>>
>>> Changes in ITKapps from v4.3.0-apps to v4.4.0-apps:
>>>
>>> Bill Lorensen (3):
>>> COMP: VTK6 API change
>>> ENH: Add TCL Wrapped examples
>>> BUG: Missing includes for ITK4.4
>>>
>>> Hans Johnson (1):
>>> COMP: Mac 10.8 fixes were incorporated in FLTK
>>>
>>> Jamie Snape (1):
>>> BUG: Propagate build, linker, and OSX settings to external
>>> projects
>>>
>>> Matt McCormick (6):
>>> COMP: Re-add the FLTK patch for some Macs.
>>> BUG: ITK External build only depends on VTK if being built.
>>> COMP: Update FLTK SVN configuration.
>>> ENH: Bump VTK ExternalProject to 5.10.1.
>>> COMP: Use FLTK zip file stored on Midas3.
>>> ENH: Bump ITK superbuild version to 4.4.0.
>>>
>>> Roland Kwitt (1):
>>> COMP: Shadowing warning in GLSliceView.h
>>>
>>> Stephen R. Aylward (1):
>>> COMP: Fix FLTK build error on Mac/Clang.
>>>
>>> Xiaoxiao Liu (1):
>>> ENH: Print out accurate image IO error message.
>>>
>>>
>>>
>>> Changes from v4.3.0 to v4.4.0 from the Jira Issue tracker:
>>>
>>> [ITK-3002] - Make itkGetObjectMacro issue compile time warnings
>>> [ITK-3003] - Add itkGetObjectMacro to the ITK_LEGACY_REMOVE option
>>> [ITK-3085] - itkBSplineExponentialImageRegistrationTest Timeout on
>>> RogueResearch11
>>> [ITK-3086] - QuickViewTest test failure on farsight-mint
>>> [ITK-3087] - itkLargeMetaImageWriteReadTest4 test failure on
>>> dash5win7x64.kitware
>>> [ITK-3088] - itkClampImageFilterTest test failure on lhcp-win7vm2.nlm
>>> Win32-VS9-Release-Shared VS10-Release-Shared
>>> [ITK-3089] - itkLSMImageIOTest on eldorado.kitware Ubuntu-g++-4.6.2-Debug
>>> [ITK-3090] - itkTimeVaryingVelocityFieldImageRegistrationTest test
>>> failure on eldorado.kitware Ubuntu-g++-4.6.2-Debug
>>> [ITK-3091] - itkLSMImageIOTest test failure on RogueResearch9,
>>> Mac10.6-gcc-rel-x86_64-static
>>> [ITK-3093] - itkTIFFImageIOSpacing test failure on mini0.nlm,
>>> MacOSX-cross-rosetta
>>> [ITK-3094] - itkMeshFileReadWriteTest04 test failure on mini0.nlm,
>>> MacOSX-cross-rosetta
>>> [ITK-3095] - itkMeshFileReadWriteTest02 test failure on mini0.nlm,
>>> MacOSX-cross-rosetta
>>> [ITK-3096] - itkDiscreteGaussianImageFilterTest2 test failure on
>>> mini0.nlm, MacOSX-cross-rosetta
>>>
>>> Bug
>>> [ITK-2889] - Bug in BSplineInterpolateImageFunction ?
>>> [ITK-2919] - Build with JOM fails to properly generate ITKTargets.cmake
>>> [ITK-2943] - Add migration guide related to "itkTestMain.h"
>>> [ITK-2975] - itk::CastImageFilter creates bad output
>>> [ITK-2978] - ImageSeriesFileReader MetaDataDictionary Array
>>> Incorrectly Handles Missing Fields
>>> [ITK-2983] - ITKVtkGlue not adding VTK_LIBRARIES
>>> [ITK-2988] - tiff name pollution
>>> [ITK-2989] - A factor of 1/standard_deviation is missing from the
>>> kernel pdf estimator in MutualInformationImageToImageMetric
>>> [ITK-2992] - tif_config.h is not install
>>> [ITK-2995] - Install tree ITKConfig.cmake is wrong for FFTW
>>> [ITK-3004] - Direction cosine matrix generated using the images DICOM
>>> tag "image orientation (patient)" or (0020,0037) is not necessarilly
>>> orthogonal
>>> [ITK-3009] - itk::InverseDisplacementFieldImageFilter does not work
>>> properly
>>> [ITK-3011] - Maurer for Danielsson in Surface Distance
>>> [ITK-3012] - ld error on exit when using itkBinaryErodeImageFilter and
>>> itkBinaryDilateImageFilter
>>> [ITK-3015] - Modules/IO/PhillipsREC/src/itkPhilipsPar.cxx contains
>>> nonsense code
>>> [ITK-3017] - ITK_ABI_EXPORT is used directly when ITKCommon_EXPORT
>>> should be used
>>> [ITK-3020] - ImageRegistration2D bug
>>> [ITK-3021] - itk::ImportImageContainer use of memcpy seen as harmful
>>> [ITK-3028] - BUG: B-spline interpolator should use direction
>>> [ITK-3064] - BSplineDeformableTransform writes out a warning every
>>> time a point in an image is transformed, causes memory allocation
>>> errors
>>> [ITK-3065] - TestImportImageContainer cannot handle memory reallocation
>>> [ITK-3066] - BSplineDeformableTransform::InsideValidRegion icm with
>>> even spline orders and ITK_USE_CENTERED_PIXEL_COORDINATES_CONSISTENTLY
>>> [ITK-3068] - Cannot resample a VectorImage
>>> [ITK-3069] - itkMersenneTwisterRandomVariateGenerator is not thread safe
>>> [ITK-3070] - IPLCommonImageIO fails to read GE Signa CT file series.
>>> [ITK-3071] - PolyLineParametricPath converges too slow
>>> [ITK-3072] - itkTransforms could supply a spatial Jacobian.
>>> [ITK-3083] - Clean Dashboard for 4.4 release
>>> [ITK-3118] - inconsistent behavior of all filters derived from
>>> itk::BinaryFunctorImageFilter
>>>
>>> Improvement
>>> [ITK-2896] - Add missing NumericTraits for complex
>>> [ITK-2940] - MaskedFFTNormalizedCorrelationImageFilter should be
>>> templated on MaskType
>>> [ITK-2964] - CMake warnings about "Perhaps should you turn on more
>>> WRAP_* options" not helpful.
>>> [ITK-2977] - itkMatrix sometimes requires extra VNL includes, leading
>>> to confusing linker errors
>>> [ITK-2980] - STYLE: Make FEM Get/Set codes use itkMacros wherever
>>> possible
>>> [ITK-2993] - Add Masking value to MaskImageFilter
>>> [ITK-2996] - Improve speed bilateral filter (itk::BilateralImageFilter)
>>> [ITK-3001] - itkGetObjectMacro pervasively hides the
>>> itkGetConstObjectMacro
>>> [ITK-3008] - Apply cppcheck to ITK
>>> [ITK-3016] - Allow the ClampImageFilter to use user-defined bounds
>>> [ITK-3073] - Const Correctness Warning
>>>
>>> New Feature
>>> [ITK-2985] - Get the internal transforms of the
>>> itkSyNImageRegistrationMethod
>>> [ITK-3005] - Add ITK icon to ITK wiki, doc and examples
>>> Task
>>> [ITK-2560] - Remove ITK_TEMPLATE_TXX
>>> [ITK-2979] - Fix doxygen documentation
>>> [ITK-3032] - Duplicate Source Code Versions of itkImagetoVTKImageFilter
>>>
>>>
>>>
>>> Enjoy ITK!
>>> _____________________________________
>>> Powered by www.kitware.com
>>>
>>> Visit other Kitware open-source projects at
>>> http://www.kitware.com/opensource/opensource.html
>>>
>>> Kitware offers ITK Training Courses, for more information visit:
>>> http://www.kitware.com/products/protraining.php
>>>
>>> Please keep messages on-topic and check the ITK FAQ at:
>>> http://www.itk.org/Wiki/ITK_FAQ
>>>
>>> Follow this link to subscribe/unsubscribe:
>>> http://www.itk.org/mailman/listinfo/insight-users
>>>
>>
>>
>> _____________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Kitware offers ITK Training Courses, for more information visit:
>> http://www.kitware.com/products/protraining.php
>>
>> Please keep messages on-topic and check the ITK FAQ at:
>> http://www.itk.org/Wiki/ITK_FAQ
>>
>> Follow this link to subscribe/unsubscribe:
>> http://www.itk.org/mailman/listinfo/insight-users
>>
>>
>
>
> --
> Unpaid intern in BillsBasement at noware dot com
>
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