[Insight-users] ITK build fails on big endian test on OS X 10.8.3/Intel

[Sohail Shafii]

Clang worked out. Thanks.


On Mon, May 20, 2013 at 10:12 AM, Sohail Shafii <ssshafii at ucdavis.edu>wrote:

> I'm using /usr/local/bin/gcc, which is:
> Using built-in specs.
> COLLECT_GCC=/usr/local/bin/gcc
>
> COLLECT_LTO_WRAPPER=/usr/local/libexec/gcc/x86_64-apple-darwin11.3.0/4.7.0/lto-wrapper
> Target: x86_64-apple-darwin11.3.0
> Configured with: ./configure
> Thread model: posix
> gcc version 4.7.0 (GCC)
>
> I assume that clang is in
> /Applications/Xcode.app/Contents/Developer/usr/bin/. Which is:
> Using built-in specs.
> Target: i686-apple-darwin11
> Configured with:
> /private/var/tmp/llvmgcc42/llvmgcc42-2336.11~182/src/configure
> --disable-checking --enable-werror
> --prefix=/Applications/Xcode.app/Contents/Developer/usr/llvm-gcc-4.2
> --mandir=/share/man --enable-languages=c,objc,c++,obj-c++
> --program-prefix=llvm- --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/
> --with-slibdir=/usr/lib --build=i686-apple-darwin11
> --enable-llvm=/private/var/tmp/llvmgcc42/llvmgcc42-2336.11~182/dst-llvmCore/Developer/usr/local
> --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11
> --target=i686-apple-darwin11 --with-gxx-include-dir=/usr/include/c++/4.2.1
> Thread model: posix
> gcc version 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.11.00)
>
>
> I'll try that one right now with 4.3.2. Not familiar with obtaining rc
> versions of ITK. I assume you mean checkout the git version and switch to
> 4.4rc1?
>
> Thanks for the help, Sohail
>
>
> On Mon, May 20, 2013 at 9:53 AM, Bradley Lowekamp <blowekamp at mail.nih.gov>wrote:
>
>> Hello Sohail,
>>
>> Some changes have been made to the way GCC_XML is build since 4.3.2. Can
>> you give 4.4rc1 a try?
>>
>> Also what compiler are you using? This version of gcc on OSX is know to
>> have some problems:
>>
>> $ gcc --version
>> i686-apple-darwin11-llvm-gcc-4.2 (GCC) 4.2.1 (Based on Apple Inc. build
>> 5658) (LLVM build 2336.11.00)
>>
>> You should try to compile ITK with clang.
>>
>> Brad
>>
>>
>>
>>
>> On May 20, 2013, at 12:23 PM, Sohail Shafii <ssshafii at ucdavis.edu> wrote:
>>
>> > Hi,
>> >
>> > I've been trying to build ITK, and I get this error:
>> > [  7%] Performing configure step for 'GCC_XML'
>> > -- Check if the system is big endian
>> > -- Searching 16 bit integer
>> > CMake Error at
>> /usr/local/share/cmake-2.8/Modules/TestBigEndian.cmake:44 (message):
>> >   no suitable type found
>> > Call Stack (most recent call first):
>> >   GCC/config_cmake/CMakeLists.txt:158 (TEST_BIG_ENDIAN)
>> >
>> >
>> > -- Configuring incomplete, errors occurred!
>> > make[2]: ***
>> [Wrapping/Generators/GccXML/gccxml/src/GCC_XML-stamp/GCC_XML-configure]
>> Error 1
>> > make[1]: *** [Wrapping/Generators/GccXML/CMakeFiles/GCC_XML.dir/all]
>> Error 2
>> > make[1]: *** Waiting for unfinished jobs....
>> >
>> > System is MacBook Pro running OS X 10.8.3. This is ITK 4.3.2 and I'm
>> running Cmake 2.8.11. Not sure why it's trying to run this test on my x86
>> machine. Please advise.
>> >
>> > Thanks,
>> > Sohail
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