[ITK-users] Simpleitk installation on Mac 10.9.2

[Chao Wang]

Hi, Dave,

I gave up building it by myself. For the binary installation on Mac, I did
'sudo easy_install SimplyITK'.

I believe it is successfully installed. But when I entered python, it gave
me an error like the above.

Please direct me to where it can be solved.

Thanks,

Chao


On Wed, Apr 16, 2014 at 2:28 PM, David Welch <david.m.welch at gmail.com>wrote:

> Hi Chao,
>
> Let's keep this on the mailing list.  I assumed from your original
> message you were trying to build with R wrapping, not Python.  That was
> probably your original problem - just turn off R_WRAPPING (or whatever it
> is in the CMake GUI).
>
> For your first error: if you Google "Fatal Python error:
> PyThreadState_Get: no current thread" there are a TON of hits.  What have
> you tried?
>
> Ubuntu is a different issue, so let's take it one OS at a time.
>
> Cheers,
> Dave
>
>
> On Wed, Apr 16, 2014 at 2:47 PM, Chao Wang <dynastywang1010 at gmail.com>wrote:
>
>> I also tried in ubuntu, after sudo easy_install SimpleITK, and import
>> SimpleITK as sitk,
>>
>>
>> Python still cannot find the package.
>>
>> Thanks,
>>
>> Chao
>>
>>
>> On Wed, Apr 16, 2014 at 11:52 AM, Chao Wang <dynastywang1010 at gmail.com>wrote:
>>
>>>
>>> Hi, David,
>>>
>>> I switched to binary install and it was successful, I hope.
>>>
>>> But, when I open python and tried to import SimpleITK as import
>>> SimpleITK as sitk
>>>
>>> sitk
>>>
>>> Fatal Python error: PyThreadState_Get: no current thread
>>>
>>> Abort trap: 6
>>>
>>>
>>>
>>>
>>> Process:         Python [90787]
>>> Path:
>>>  /Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python
>>> Identifier:      Python
>>> Version:         2.7.3 (2.7.3)
>>> Code Type:       X86-64 (Native)
>>> Parent Process:  bash [90730]
>>> Responsible:     Terminal [200]
>>> User ID:         501
>>>
>>> Date/Time:       2014-04-16 11:51:19.463 -0700
>>> OS Version:      Mac OS X 10.9.2 (13C64)
>>> Report Version:  11
>>> Anonymous UUID:  D20752B2-FC7D-334A-7483-EAC1C469DF11
>>>
>>> Sleep/Wake UUID: 619C0566-6D47-4938-8E49-BD544C13CF52
>>>
>>> Crashed Thread:  0  Dispatch queue: com.apple.main-thread
>>>
>>> Exception Type:  EXC_CRASH (SIGABRT)
>>> Exception Codes: 0x0000000000000000, 0x0000000000000000
>>>
>>> Application Specific Information:
>>> abort() called
>>>
>>>  I wonder if the path is wrong or something else happened?
>>>
>>>
>>> Thanks,
>>>
>>>
>>> Chao
>>>
>>> On Wed, Apr 16, 2014 at 9:37 AM, David Welch <david.m.welch at gmail.com>wrote:
>>>
>>>> Hi Chao,
>>>>
>>>> It looks like your path to the R framework is incorrect in your CMake
>>>> build.  Can you email the values for R in your CMakeCache file?
>>>>
>>>> Cheers,
>>>> Dave
>>>>
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>>>
>>>
>>> --
>>> Chao Wang
>>>
>>
>>
>>
>> --
>> Chao Wang
>>
>
>


-- 
Chao Wang
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