[ITK-users] SimpleITK - supported Pixel Type by JoinSeriesImageFilter

[devis peressutti]

Excellent!

Many thanks,
Devis


On 23 May 2014 15:25, Bradley Lowekamp <blowekamp at mail.nih.gov> wrote:

> Hello,
>
> You can use the ExtractImageFilter to get a 2D slice from a 3D image.
>
> Brad
>
> On May 23, 2014, at 10:10 AM, devis peressutti <devis.peressutti at gmail.com>
> wrote:
>
> Hi Brad,
>
> Thanks for your reply.
>
> You are right. The dimension is 3 with size 256x256x1.
>
> What would you suggest to get the stack of slices?
>
> Many thanks,
> Devis
>
>
> On 23 May 2014 14:55, Bradley Lowekamp <blowekamp at mail.nih.gov> wrote:
>
>> Hello,
>>
>> That filter is instantiated over all normal pixel types, but only for
>> input's of 2D. Can you check what the dimensions is of your input images
>> are? Sometimes a slice is actually a 3D image with one dimension of size 1.
>>
>> Brad
>>
>> On May 23, 2014, at 9:48 AM, devis peressutti <devis.peressutti at gmail.com>
>> wrote:
>>
>> > Dear itk-users,
>> >
>> > I'm using the JoinSeriesImageFilter in SimpleITK to stack a series of
>> 2D slices into a 3D volume but I get the following exception thrown:
>> >
>> > RuntimeError: Exception thrown in SimpleITK
>> JoinSeriesImageFilter_Execute:
>> >
>> >
>> /scratch/dashboards/SimpleITK-RHEL6-x86_64-pkg-py2.7/SimpleITK/Code/Common/include/sitkMemberFunctionFactory.hxx:180:
>> >
>> > sitk::ERROR: Pixel type: 16-bit unsigned integer is not supported in 3D
>> byN3itk6simple21JoinSeriesImageFilterE
>> >
>> > I tried to cast the 2D images to other PixelType but got same result.
>> >
>> > Any hint would be greatly appreciated.
>> >
>> > Thanks,
>> > Devis
>> >
>> >
>> > _____________________________________
>> > Powered by www.kitware.com
>> >
>> > Visit other Kitware open-source projects at
>> > http://www.kitware.com/opensource/opensource.html
>> >
>> > Kitware offers ITK Training Courses, for more information visit:
>> > http://www.kitware.com/products/protraining.php
>> >
>> > Please keep messages on-topic and check the ITK FAQ at:
>> > http://www.itk.org/Wiki/ITK_FAQ
>> >
>> > Follow this link to subscribe/unsubscribe:
>> > http://www.itk.org/mailman/listinfo/insight-users
>>
>>
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://www.itk.org/pipermail/insight-users/attachments/20140523/2d5cb471/attachment.html>