[ITK-users] ImageSeriesReader memory allocation for large datasets

Matt McCormick matt.mccormick at kitware.com
Tue Apr 19 10:03:55 EDT 2016


Hi Assil,

To limit memory usage, stream the pipeline.  See these examples:

  http://www.itk.org/Doxygen/html/Examples_2IO_2VisibleHumanStreamReadWrite_8cxx-example.html
  http://itk.org/ITKExamples/src/Core/Common/StreamAPipeline/Documentation.html

HTH,
Matt

On Tue, Apr 19, 2016 at 9:23 AM, abenchaaben <abenchaaben at histalim.com> wrote:
> I have tested some more data sets (png,jpeg) on different systems, but the
> result is always the same. As
> soon as the number of slices gets too high, the memory allocation fails.
> Does the ImageSeriesReader dont handel big data?
>
> Does anyone have an idea how this problem can be fixed?
>
> Thanks,
>
> Assil
>
>
>
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