[ITK-users] Reconstruct non-transverse scanned MR images

[沈庄明]

​Hi all,


I have a set of DICOM MR images which is scanned in Coronal, not Transverse. As a result, when I reconstructed them to a 3D volume using ITK, its orientation seems to be not the same as the that of the Transverse scanned 3D volume, whose orientation is standard LPS. My questions are


(1) Should I reorientation the Coronal scanned 3D volume to standard LPS orientation?

(2) If need, should I use itk.OrientImageFilter to do that? Or use any other methods?

(3) If need use itk.OrientImageFilter, how to write "orienter->SetDesiredCoordinateOrientation(itk::SpatialOrientation::ITK_COORDINATE_ORIENTATION_LPS)" using Python?


Thanks in advance.



Regards,


Zhuangming Shen

​
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://public.kitware.com/pipermail/insight-users/attachments/20170424/959c7a60/attachment.html>