itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep > Class Template Reference
[Image Functions]

Returns true if the pixel value of a vector image has a Mahalanobis distance below the value specified by the threshold. More...

#include <itkMahalanobisDistanceThresholdImageFunction.h>

Inheritance diagram for itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >:

[legend]Collaboration diagram for itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >:

[legend]List of all members.

Public Types
typedef MahalanobisDistanceThresholdImageFunction	Self
typedef ImageFunction< TInputImage, bool, TCoordRep >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::InputImageType	InputImageType
typedef TInputImage::PixelType	PixelType
typedef Superclass::PointType	PointType
typedef Superclass::IndexType	IndexType
typedef Superclass::ContinuousIndexType	ContinuousIndexType
typedef vnl_matrix< double >	CovarianceMatrixType
typedef vnl_vector< double >	MeanVectorType
Public Member Functions
virtual const char *	GetClassName () const
	itkStaticConstMacro (ImageDimension, unsigned int, Superclass::ImageDimension)
virtual bool	Evaluate (const PointType &point) const
virtual bool	EvaluateAtContinuousIndex (const ContinuousIndexType &index) const
virtual bool	EvaluateAtIndex (const IndexType &index) const
virtual double	GetThreshold () const
virtual void	SetThreshold (double _arg)
void	SetMean (const MeanVectorType &mean)
const MeanVectorType &	GetMean () const
void	SetCovariance (const CovarianceMatrixType &cov)
const CovarianceMatrixType &	GetCovariance () const
Static Public Member Functions
Pointer	New ()
Protected Member Functions
	MahalanobisDistanceThresholdImageFunction ()
	~MahalanobisDistanceThresholdImageFunction ()
void	PrintSelf (std::ostream &os, Indent indent) const

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Detailed Description

template<class TInputImage, class TCoordRep = float>
class itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >

Returns true if the pixel value of a vector image has a Mahalanobis distance below the value specified by the threshold.

This ImageFunction returns true if the pixel value of a vector image has a Mahalanobis distance below the value specided by the threshold. The Mahalanobis distance is computed with the MahalanobisDistanceMembershipFunction class which has to be initialized with the mean an covariance to be used. This class is intended to be used only with images whose pixel type is a vector (array).

The input image is set via method SetInputImage().

Methods Evaluate, EvaluateAtIndex and EvaluateAtContinuousIndex respectively evaluate the function at an geometric point, image index and continuous image index.

Definition at line 47 of file itkMahalanobisDistanceThresholdImageFunction.h.

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Member Typedef Documentation

template<class TInputImage, class TCoordRep = float> typedef SmartPointer<const Self> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::ConstPointer

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 55 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float> typedef Superclass::ContinuousIndexType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::ContinuousIndexType

ContinuousIndex typedef support. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 79 of file itkMahalanobisDistanceThresholdImageFunction.h. Referenced by itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateAtContinuousIndex().

template<class TInputImage, class TCoordRep = float> typedef vnl_matrix<double> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::CovarianceMatrixType

Type used to represent the Covariance matrix of the vector population Definition at line 82 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float> typedef Superclass::IndexType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::IndexType

Index typedef support. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 76 of file itkMahalanobisDistanceThresholdImageFunction.h. Referenced by itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Evaluate(), itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateAtContinuousIndex(), and itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateAtIndex().

template<class TInputImage, class TCoordRep = float> typedef Superclass::InputImageType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::InputImageType

InputImageType typedef support. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 64 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float> typedef vnl_vector<double> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::MeanVectorType

Type used to represent the Mean Vector of the vector population Definition at line 85 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float> typedef TInputImage::PixelType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::PixelType

Typedef to describe the type of pixel. Definition at line 67 of file itkMahalanobisDistanceThresholdImageFunction.h. Referenced by itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::~MahalanobisDistanceThresholdImageFunction().

template<class TInputImage, class TCoordRep = float> typedef SmartPointer<Self> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Pointer

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 54 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float> typedef Superclass::PointType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::PointType

Point typedef support. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 73 of file itkMahalanobisDistanceThresholdImageFunction.h. Referenced by itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Evaluate().

template<class TInputImage, class TCoordRep = float> typedef MahalanobisDistanceThresholdImageFunction itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Self

Standard class typedefs. Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 52 of file itkMahalanobisDistanceThresholdImageFunction.h. Referenced by itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::~MahalanobisDistanceThresholdImageFunction().

template<class TInputImage, class TCoordRep = float> typedef ImageFunction<TInputImage,bool,TCoordRep> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Superclass

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 53 of file itkMahalanobisDistanceThresholdImageFunction.h.

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Constructor & Destructor Documentation

template<class TInputImage, class TCoordRep = float> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::MahalanobisDistanceThresholdImageFunction (   )  [protected]

template<class TInputImage, class TCoordRep = float> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::~MahalanobisDistanceThresholdImageFunction (   )  [inline, protected]

Definition at line 158 of file itkMahalanobisDistanceThresholdImageFunction.h. References itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::PixelType, and itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Self.

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Member Function Documentation

template<class TInputImage, class TCoordRep = float> virtual bool itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Evaluate (  const PointType &  point  )  const [inline, virtual]

BinaryThreshold the image at a point position Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method. Implements itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 96 of file itkMahalanobisDistanceThresholdImageFunction.h. References itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::IndexType, and itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::PointType.

template<class TInputImage, class TCoordRep = float> virtual bool itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateAtContinuousIndex (  const ContinuousIndexType &  index  )  const [inline, virtual]

BinaryThreshold the image at a continuous index position Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method. Implements itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 111 of file itkMahalanobisDistanceThresholdImageFunction.h. References itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::ContinuousIndexType, and itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::IndexType.

template<class TInputImage, class TCoordRep = float> virtual bool itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateAtIndex (  const IndexType &  index  )  const [inline, virtual]

BinaryThreshold the image at an index position. Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method. Implements itk::ImageFunction< TInputImage, bool, TCoordRep >. Definition at line 128 of file itkMahalanobisDistanceThresholdImageFunction.h. References itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::IndexType.

template<class TInputImage, class TCoordRep = float> virtual const char* itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::GetClassName (   )  const [virtual]

Run-time type information (and related methods). Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

template<class TInputImage, class TCoordRep = float> const CovarianceMatrixType& itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::GetCovariance (   )  const

Method to set covariance matrix Also, this function calculates inverse covariance and pre factor of MahalanobisDistance Distribution to speed up GetProbability

template<class TInputImage, class TCoordRep = float> const MeanVectorType& itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::GetMean (   )  const

Method to set mean

template<class TInputImage, class TCoordRep = float> virtual double itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::GetThreshold (   )  const [virtual]

Get the lower threshold value.

template<class TInputImage, class TCoordRep = float> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::itkStaticConstMacro (  ImageDimension  , unsigned  int, Superclass::ImageDimension  )

Dimension underlying input image.

template<class TInputImage, class TCoordRep = float> Pointer itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::New (   )  [static]

Method for creation through the object factory.

template<class TInputImage, class TCoordRep = float> void itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::PrintSelf (  std::ostream &  os, Indent  indent )  const [protected]

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

template<class TInputImage, class TCoordRep = float> void itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::SetCovariance (  const CovarianceMatrixType &  cov  )

Method to set covariance matrix Also, this function calculates inverse covariance and pre factor of MahalanobisDistance Distribution to speed up GetProbability

template<class TInputImage, class TCoordRep = float> void itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::SetMean (  const MeanVectorType &  mean  )

Method to set mean

template<class TInputImage, class TCoordRep = float> virtual void itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::SetThreshold (  double  _arg  )  [virtual]

Get the lower threshold value.

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The documentation for this class was generated from the following file:

• itkMahalanobisDistanceThresholdImageFunction.h

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