itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType > Class Template Reference

This function is used in ThresholdSegmentationLevelSetImageFilter to segment structures in images based on intensity values. More...

#include <itkThresholdSegmentationLevelSetFunction.h>

Inheritance diagram for itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >:

[legend]Collaboration diagram for itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >:

[legend]List of all members.

Public Types
typedef ThresholdSegmentationLevelSetFunction	Self
typedef SegmentationLevelSetFunction< TImageType, TFeatureImageType >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef TFeatureImageType	FeatureImageType
typedef Superclass::ImageType	ImageType
typedef Superclass::ScalarValueType	ScalarValueType
typedef Superclass::FeatureScalarType	FeatureScalarType
typedef Superclass::RadiusType	RadiusType
Public Member Functions
virtual const char *	GetClassName () const
	itkStaticConstMacro (ImageDimension, unsigned int, Superclass::ImageDimension)
virtual void	CalculateSpeedImage ()
virtual void	Initialize (const RadiusType &r)
void	SetUpperThreshold (FeatureScalarType f)
FeatureScalarType	GetUpperThreshold () const
void	SetLowerThreshold (FeatureScalarType f)
FeatureScalarType	GetLowerThreshold () const
void	SetEdgeWeight (const ScalarValueType p)
ScalarValueType	GetEdgeWeight () const
void	SetSmoothingConductance (const ScalarValueType p)
ScalarValueType	GetSmoothingConductance () const
void	SetSmoothingIterations (const int p)
int	GetSmoothingIterations () const
void	SetSmoothingTimeStep (const ScalarValueType i)
ScalarValueType	GetSmoothingTimeStep () const
Static Public Member Functions
Pointer	New ()
Protected Member Functions
	ThresholdSegmentationLevelSetFunction ()
virtual	~ThresholdSegmentationLevelSetFunction ()
	ThresholdSegmentationLevelSetFunction (const Self &)
void	operator= (const Self &)
void	PrintSelf (std::ostream &os, Indent indent) const
Protected Attributes
FeatureScalarType	m_UpperThreshold
FeatureScalarType	m_LowerThreshold
ScalarValueType	m_EdgeWeight
ScalarValueType	m_SmoothingConductance
int	m_SmoothingIterations
ScalarValueType	m_SmoothingTimeStep

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Detailed Description

template<class TImageType, class TFeatureImageType = TImageType>
class itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >

This function is used in ThresholdSegmentationLevelSetImageFilter to segment structures in images based on intensity values.

SegmentationLevelSetFunction is a subclass of the generic LevelSetFunction.

It useful for segmentations based on intensity values in an image. It works by constructing a speed term (feature image) with positive values inside an intensity window (between a low and high threshold) and negative values outside that intensity window. The evolving level set front will lock onto regions that are at the edges of the intensity window.

You may optionally add a Laplacian calculation on the image to the threshold-based speed term by setting the EdgeWeight parameter to a non-zero value. The Laplacian term will cause the evolving surface to be more strongly attracted to image edges. Several parameters control a preprocessing FeatureImage smoothing stage applied only to the Laplacian calculation.

Image $f$ is thresholded pixel by pixel using upper threshold $U$ and lower threshold $L$ according to the following formula.

See also:

SegmentationLevelSetImageFunction

ThresholdSegmentationLevelSetImageFilter

Definition at line 53 of file itkThresholdSegmentationLevelSetFunction.h.

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Member Typedef Documentation

template<class TImageType, class TFeatureImageType = TImageType> typedef SmartPointer<const Self> itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::ConstPointer

Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 61 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> typedef TFeatureImageType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::FeatureImageType

Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 62 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> typedef Superclass::FeatureScalarType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::FeatureScalarType

Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 73 of file itkThresholdSegmentationLevelSetFunction.h. Referenced by itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetLowerThreshold(), itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetUpperThreshold(), itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetLowerThreshold(), and itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetUpperThreshold().

template<class TImageType, class TFeatureImageType = TImageType> typedef Superclass::ImageType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::ImageType

Extract some parameters from the superclass. Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 71 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> typedef SmartPointer<Self> itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::Pointer

Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 60 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> typedef Superclass::RadiusType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::RadiusType

Neighborhood radius type Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 74 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> typedef Superclass::ScalarValueType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::ScalarValueType

Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 72 of file itkThresholdSegmentationLevelSetFunction.h. Referenced by itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetSmoothingTimeStep().

template<class TImageType, class TFeatureImageType = TImageType> typedef ThresholdSegmentationLevelSetFunction itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::Self

Standard class typedefs. Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 58 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> typedef SegmentationLevelSetFunction<TImageType, TFeatureImageType> itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::Superclass

Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 59 of file itkThresholdSegmentationLevelSetFunction.h.

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Constructor & Destructor Documentation

template<class TImageType, class TFeatureImageType = TImageType> itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::ThresholdSegmentationLevelSetFunction (   )  [inline, protected]

Definition at line 154 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> virtual itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::~ThresholdSegmentationLevelSetFunction (   )  [inline, protected, virtual]

Definition at line 166 of file itkThresholdSegmentationLevelSetFunction.h. References HardConnectedComponentImageFilter::PrintSelf().

template<class TImageType, class TFeatureImageType = TImageType> itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::ThresholdSegmentationLevelSetFunction (  const Self &   )  [protected]

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Member Function Documentation

template<class TImageType, class TFeatureImageType = TImageType> virtual void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::CalculateSpeedImage (   )  [virtual]

This method must be defined in a subclass to implement a working function object. This method is called before the solver begins its work to produce the speed image used as the level set function's Propagation speed term. See LevelSetFunction for more information. Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.

template<class TImageType, class TFeatureImageType = TImageType> virtual const char* itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetClassName (   )  const [virtual]

Run-time type information (and related methods) Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.

template<class TImageType, class TFeatureImageType = TImageType> ScalarValueType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetEdgeWeight (   )  const [inline]

Set/Get the weight applied to the edge (Laplacian) attractor in the speed term function. Zero will turn this term off. Definition at line 108 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> FeatureScalarType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetLowerThreshold (   )  const [inline]

Set/Get threshold values Definition at line 87 of file itkThresholdSegmentationLevelSetFunction.h. References itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::FeatureScalarType.

template<class TImageType, class TFeatureImageType = TImageType> ScalarValueType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetSmoothingConductance (   )  const [inline]

Anisotropic diffusion is applied to the FeatureImage before calculatign the Laplacian (edge) term. This method sets/gets the smoothing conductance. Definition at line 121 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> int itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetSmoothingIterations (   )  const [inline]

Anisotropic diffusion is applied to the FeatureImage before calculating the Laplacian (edge) term. This method sets/gets the number of diffusion iterations. Definition at line 134 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> ScalarValueType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetSmoothingTimeStep (   )  const [inline]

Anisotropic diffusion is applied to the FeatureImage before calculating the Laplacian (edge) term. This method sets/gets the diffusion time step. Definition at line 147 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> FeatureScalarType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::GetUpperThreshold (   )  const [inline]

Set/Get threshold values Definition at line 83 of file itkThresholdSegmentationLevelSetFunction.h. References itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::FeatureScalarType.

template<class TImageType, class TFeatureImageType = TImageType> virtual void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::Initialize (  const RadiusType &  r  )  [inline, virtual]

This method creates the appropriate member variable operators for the level-set calculations. The argument to this function is a the radius necessary for performing the level-set calculations. Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >. Definition at line 93 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::itkStaticConstMacro (  ImageDimension  , unsigned  int, Superclass::ImageDimension  )

Extract some parameters from the superclass. Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.

template<class TImageType, class TFeatureImageType = TImageType> Pointer itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::New (   )  [static]

Method for creation through the object factory. Reimplemented from itk::LevelSetFunction< TImageType >.

template<class TImageType, class TFeatureImageType = TImageType> void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::operator= (  const Self &   )  [protected]

Reimplemented from itk::LevelSetFunction< TImageType >.

template<class TImageType, class TFeatureImageType = TImageType> void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::PrintSelf (  std::ostream &  os, Indent  indent )  const [inline, protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes. Reimplemented from itk::LevelSetFunction< TImageType >. Definition at line 171 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetEdgeWeight (  const ScalarValueType  p  )  [inline]

Set/Get the weight applied to the edge (Laplacian) attractor in the speed term function. Zero will turn this term off. Definition at line 104 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetLowerThreshold (  FeatureScalarType  f  )  [inline]

Set/Get threshold values Definition at line 85 of file itkThresholdSegmentationLevelSetFunction.h. References itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::FeatureScalarType.

template<class TImageType, class TFeatureImageType = TImageType> void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetSmoothingConductance (  const ScalarValueType  p  )  [inline]

Anisotropic diffusion is applied to the FeatureImage before calculatign the Laplacian (edge) term. This method sets/gets the smoothing conductance. Definition at line 117 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetSmoothingIterations (  const int  p  )  [inline]

Anisotropic diffusion is applied to the FeatureImage before calculating the Laplacian (edge) term. This method sets/gets the number of diffusion iterations. Definition at line 130 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetSmoothingTimeStep (  const ScalarValueType  i  )  [inline]

Anisotropic diffusion is applied to the FeatureImage before calculating the Laplacian (edge) term. This method sets/gets the diffusion time step. Definition at line 143 of file itkThresholdSegmentationLevelSetFunction.h. References itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::ScalarValueType.

template<class TImageType, class TFeatureImageType = TImageType> void itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::SetUpperThreshold (  FeatureScalarType  f  )  [inline]

Set/Get threshold values Definition at line 81 of file itkThresholdSegmentationLevelSetFunction.h. References itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::FeatureScalarType.

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Member Data Documentation

template<class TImageType, class TFeatureImageType = TImageType> ScalarValueType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::m_EdgeWeight [protected]

Definition at line 184 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> FeatureScalarType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::m_LowerThreshold [protected]

Definition at line 183 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> ScalarValueType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::m_SmoothingConductance [protected]

Definition at line 185 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> int itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::m_SmoothingIterations [protected]

Definition at line 186 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> ScalarValueType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::m_SmoothingTimeStep [protected]

Definition at line 187 of file itkThresholdSegmentationLevelSetFunction.h.

template<class TImageType, class TFeatureImageType = TImageType> FeatureScalarType itk::ThresholdSegmentationLevelSetFunction< TImageType, TFeatureImageType >::m_UpperThreshold [protected]

Definition at line 182 of file itkThresholdSegmentationLevelSetFunction.h.

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The documentation for this class was generated from the following file:

• itkThresholdSegmentationLevelSetFunction.h

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