itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage > Class Template Reference
[Hybrid Segmentation Filters]

#include <itkVoronoiSegmentationImageFilterBase.h>

Inheritance diagram for itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >:

[legend]Collaboration diagram for itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >:

[legend]List of all members.

Public Types
typedef VoronoiSegmentationImageFilterBase	Self
typedef ImageToImageFilter< TInputImage, TOutputImage >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef TInputImage	InputImageType
typedef TInputImage::Pointer	InputImagePointer
typedef TInputImage::ConstPointer	InputImageConstPointer
typedef TOutputImage	OutputImageType
typedef TInputImage::IndexType	IndexType
typedef TInputImage::SizeType	SizeType
typedef TInputImage::RegionType	RegionType
typedef TInputImage::PixelType	PixelType
typedef TOutputImage::PixelType	OutputPixelType
typedef VoronoiDiagram2D< double >	VoronoiDiagram
typedef VoronoiDiagram2DGenerator< double >	VoronoiDiagramGenerator
typedef VoronoiDiagram::PointType	PointType
typedef VoronoiDiagram::CellType	CellType
typedef VoronoiDiagram::CellAutoPointer	CellAutoPointer
typedef VoronoiDiagram::Pointer	VoronoiPointer
typedef CellType::PointIdIterator	PointIdIterator
typedef VoronoiDiagram::SeedsType	SeedsType
typedef VoronoiDiagram::SeedsIterator	SeedsIterator
typedef VoronoiDiagram::NeighborIdIterator	NeighborIdIterator
typedef VoronoiDiagram::VoronoiEdgeIterator	EdgeIterator
typedef VoronoiDiagram::VoronoiEdge	EdgeInfo
typedef std::vector< PointType >	PointTypeVector
typedef std::deque< PointType >	PointTypeDeque
typedef TBinaryPriorImage	BinaryObjectImage
typedef BinaryObjectImage::Pointer	BinaryObjectImagePointer
typedef std::vector< IndexType >	IndexList
typedef Image< unsigned char, 2 >	VDImage
typedef VDImage::Pointer	VDImagePointer
Public Member Functions
virtual const char *	GetClassName () const
	itkStaticConstMacro (ImageDimension, unsigned int, TInputImage::ImageDimension)
virtual int	GetLastStepSeeds ()
virtual int	GetNumberOfSeedsToAdded ()
virtual void	TakeAPrior (const BinaryObjectImage *)
void	RunSegment (void)
void	RunSegmentOneStep (void)
VoronoiPointer	GetVoronoiDiagram (void)
PointType	GetSeed (int SeedID)
void	DrawDiagram (VDImagePointer result, unsigned char incolor, unsigned char outcolor, unsigned char boundcolor)
void	BeforeNextStep (void)
virtual void	GenerateInputRequestedRegion ()
virtual void	EnlargeOutputRequestedRegion (DataObject *output)
virtual void	SetNumberOfSeeds (int _arg)
virtual int	GetNumberOfSeeds ()
virtual void	SetMinRegion (int _arg)
virtual int	GetMinRegion ()
virtual void	SetSteps (int _arg)
virtual int	GetSteps ()
virtual void	SetUseBackgroundInAPrior (bool _arg)
virtual bool	GetUseBackgroundInAPrior ()
virtual void	SetOutputBoundary (bool _arg)
virtual bool	GetOutputBoundary ()
virtual void	SetInteractiveSegmentation (bool _arg)
virtual bool	GetInteractiveSegmentation ()
virtual void	InteractiveSegmentationOn ()
virtual void	InteractiveSegmentationOff ()
virtual void	SetMeanDeviation (double _arg)
virtual double	GetMeanDeviation ()
virtual void	MakeSegmentBoundary (void)
virtual void	MakeSegmentObject (void)
void	SetSeeds (int num, SeedsIterator begin)
Static Public Member Functions
Pointer	New ()
Protected Member Functions
	VoronoiSegmentationImageFilterBase ()
	~VoronoiSegmentationImageFilterBase ()
virtual void	PrintSelf (std::ostream &os, Indent indent) const
void	GenerateData (void)
virtual void	ClassifyDiagram (void)
virtual void	GenerateAddingSeeds (void)
void	GetPixelIndexFromPolygon (PointTypeDeque VertList, IndexList *PixelPool)
virtual bool	TestHomogeneity (IndexList &)
void	FillPolygon (PointTypeDeque vertlist, OutputPixelType color=1)
void	drawLine (PointType p1, PointType p2)
void	drawVDline (VDImagePointer result, PointType p1, PointType p2, unsigned char color)
Protected Attributes
SizeType	m_Size
int	m_NumberOfSeeds
int	m_MinRegion
int	m_Steps
int	m_LastStepSeeds
int	m_NumberOfSeedsToAdded
int	m_NumberOfBoundary
std::vector< int >	m_NumberOfPixels
std::vector< unsigned char >	m_Label
double	m_MeanDeviation
bool	m_UseBackgroundInAPrior
bool	m_OutputBoundary
bool	m_InteractiveSegmentation
VoronoiDiagram::Pointer	m_WorkingVD
VoronoiDiagramGenerator::Pointer	m_VDGenerator
std::vector< PointType >	m_SeedsToAdded

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Detailed Description

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>>
class itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >

/brief Base class for VoronoiSegmentationImageFilter

Voronoi SegmentationImageFilter is a class of segmenation algorithms that works on 2D image. Begin with certain number of seeds, VoronoiSegmentationImageFilter first partition the image plane to voronoi regions, and testing each region by some homogeneity operators, which need to be implemented in the private method: virtual bool TestHomogeneity(IndexList &Plist); after testing, all the regions are classified as either "internal" or "external" region and the "boundary" regions was defined as an "external" region that has at least one "internal" region as its neighbor. the algorithm then added seed points to the "boundary" regions (on the edges) and recursively "split" the boundary region until all the "boundary" become sufficiently small. the output of the segmentation can be either a binary object, which is the collection of all the "internal" region. Or a binary boundary delineate, which is defined as the connected lines between seed points of "boundary" region. This class is a base class for voronoi segmenation, single channel or multiple channel image segmenation can be implemented by deriving imagefilters from this class, by implementing the virtual methods

Detailed information about this algorithm can be found in: " Semi-automated color segmentation of anatomical tissue," C. Imelinska, M. Downes, and W. Yuan Computerized Medical Imaging and Graphics, Vor.24, pp 173-180, 2000.

Definition at line 59 of file itkVoronoiSegmentationImageFilterBase.h.

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Member Typedef Documentation

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TBinaryPriorImage itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::BinaryObjectImage

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 103 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef BinaryObjectImage::Pointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::BinaryObjectImagePointer

Definition at line 104 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::CellAutoPointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::CellAutoPointer

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 93 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::CellType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::CellType

Definition at line 92 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef SmartPointer<const Self> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::ConstPointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 67 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::VoronoiEdge itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::EdgeInfo

Definition at line 100 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::VoronoiEdgeIterator itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::EdgeIterator

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 99 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef std::vector<IndexType> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::IndexList

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 105 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TInputImage::IndexType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::IndexType

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 84 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TInputImage::ConstPointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::InputImageConstPointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Definition at line 82 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TInputImage::Pointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::InputImagePointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Reimplemented in itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 81 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TInputImage itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::InputImageType

Convenient typedefs. Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 80 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::NeighborIdIterator itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::NeighborIdIterator

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 98 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TOutputImage itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::OutputImageType

Some convenient typedefs. Reimplemented from itk::ImageSource< TOutputImage >. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 83 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TOutputImage::PixelType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::OutputPixelType

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 88 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TInputImage::PixelType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::PixelType

Reimplemented in itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 87 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef SmartPointer<Self> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::Pointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 66 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef CellType::PointIdIterator itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::PointIdIterator

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 95 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::PointType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::PointType

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 91 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef std::deque<PointType> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::PointTypeDeque

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 102 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef std::vector<PointType> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::PointTypeVector

Definition at line 101 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TInputImage::RegionType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::RegionType

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 86 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::SeedsIterator itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SeedsIterator

Definition at line 97 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::SeedsType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SeedsType

Definition at line 96 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiSegmentationImageFilterBase itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::Self

Standard class typedefs. Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 64 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef TInputImage::SizeType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SizeType

Definition at line 85 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef ImageToImageFilter<TInputImage,TOutputImage> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::Superclass

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 65 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef Image<unsigned char,2> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::VDImage

To output the drawing of Voronoi Diagram (VD) . Definition at line 108 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VDImage::Pointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::VDImagePointer

Definition at line 109 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram2D<double> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::VoronoiDiagram

Definition at line 89 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram2DGenerator<double> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::VoronoiDiagramGenerator

Definition at line 90 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> typedef VoronoiDiagram::Pointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::VoronoiPointer

Definition at line 94 of file itkVoronoiSegmentationImageFilterBase.h.

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Constructor & Destructor Documentation

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::VoronoiSegmentationImageFilterBase (   )  [protected]

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::~VoronoiSegmentationImageFilterBase (   )  [protected]

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Member Function Documentation

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::BeforeNextStep (  void   )

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::ClassifyDiagram (  void   )  [protected, virtual]

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::DrawDiagram (  VDImagePointer  result, unsigned char  incolor, unsigned char  outcolor, unsigned char  boundcolor )

Draw the Voronoi Diagram structure.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::drawLine (  PointType  p1, PointType  p2 )  [protected]

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::drawVDline (  VDImagePointer  result, PointType  p1, PointType  p2, unsigned char  color )  [protected]

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::EnlargeOutputRequestedRegion (  DataObject *  output  )  [virtual]

This filter does not stream and needs to produce the entire output. See also: ProcessObject::EnlargeOutputRequestedRegion() Reimplemented from itk::ProcessObject.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::FillPolygon (  PointTypeDeque  vertlist, OutputPixelType  color = 1 )  [protected]

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GenerateAddingSeeds (  void   )  [protected, virtual]

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GenerateData (  void   )  [protected, virtual]

A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead. See also: ThreadedGenerateData() Reimplemented from itk::ImageSource< TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GenerateInputRequestedRegion (   )  [virtual]

This filter does not stream and needs the entire image as input. See also: ProcessObject::GenerateInputRequestedRegion(). Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual const char* itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetClassName (   )  const [virtual]

Run-time type information (and related methods). Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual bool itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetInteractiveSegmentation (   )  [virtual]

Output the segmentation on every iteration. Useful for iteractive sessions. The setting of OutputBoundary determines the type of output.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetLastStepSeeds (   )  [virtual]

Get the number of seeds before adding new ones.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual double itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetMeanDeviation (   )  [virtual]

Set/Get the mean deviation.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetMinRegion (   )  [virtual]

Set/Get the smallest region to be divided.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetNumberOfSeeds (   )  [virtual]

Set/Get the initial number of seeds for VD.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetNumberOfSeedsToAdded (   )  [virtual]

Get the number of seeds to add.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual bool itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetOutputBoundary (   )  [virtual]

Enable the generation of the output boundary.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetPixelIndexFromPolygon (  PointTypeDeque  VertList, IndexList *  PixelPool )  [protected]

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> PointType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetSeed (  int  SeedID  )  [inline]

Get the point specified by the ID given. Definition at line 185 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetSteps (   )  [virtual]

Set/Get the number of iterations to run (if set to 0: the classification run process runs until no more cells can be divided).

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual bool itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetUseBackgroundInAPrior (   )  [virtual]

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> VoronoiPointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::GetVoronoiDiagram (  void   )  [inline]

Return the Voroni Diagram structure. Definition at line 171 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::InteractiveSegmentationOff (   )  [virtual]

Output the segmentation on every iteration. Useful for iteractive sessions. The setting of OutputBoundary determines the type of output.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::InteractiveSegmentationOn (   )  [virtual]

Output the segmentation on every iteration. Useful for iteractive sessions. The setting of OutputBoundary determines the type of output.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::itkStaticConstMacro (  ImageDimension  , unsigned  int, TInputImage::ImageDimension  )

Get the image dimension from the template parameter.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::MakeSegmentBoundary (  void   )  [virtual]

Create the output binary result for boundaries. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::MakeSegmentObject (  void   )  [virtual]

Create the output binary result for boundaries. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> Pointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::New (   )  [static]

Method for creation through the object factory. Reimplemented from itk::Object. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::PrintSelf (  std::ostream &  os, Indent  indent )  const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes. Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >, itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::RunSegment (  void   )

Perform the segmentation.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::RunSegmentOneStep (  void   )

Perform the segmentation.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SetInteractiveSegmentation (  bool  _arg  )  [virtual]

Output the segmentation on every iteration. Useful for iteractive sessions. The setting of OutputBoundary determines the type of output.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SetMeanDeviation (  double  _arg  )  [virtual]

Set/Get the mean deviation.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SetMinRegion (  int  _arg  )  [virtual]

Set/Get the smallest region to be divided.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SetNumberOfSeeds (  int  _arg  )  [virtual]

Set/Get the initial number of seeds for VD.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SetOutputBoundary (  bool  _arg  )  [virtual]

Enable the generation of the output boundary.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SetSeeds (  int  num, SeedsIterator  begin )  [inline]

Seeds positions are randomly set. If you need to set seeds position then use the SetSeeds method after the InitializeSegment method . Definition at line 177 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SetSteps (  int  _arg  )  [virtual]

Set/Get the number of iterations to run (if set to 0: the classification run process runs until no more cells can be divided).

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::SetUseBackgroundInAPrior (  bool  _arg  )  [virtual]

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual void itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::TakeAPrior (  const BinaryObjectImage *   )  [inline, virtual]

Take a prior from other segmentation node. This should be a binary object. Reimplemented in itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >, and itk::VoronoiSegmentationRGBImageFilter< TInputImage, TOutputImage >. Definition at line 157 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> virtual bool itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::TestHomogeneity (  IndexList &   )  [inline, protected, virtual]

Reimplemented in itk::VoronoiPartitioningImageFilter< TInputImage, TOutputImage >. Definition at line 237 of file itkVoronoiSegmentationImageFilterBase.h.

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Member Data Documentation

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> bool itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_InteractiveSegmentation [protected]

Definition at line 221 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> std::vector<unsigned char> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_Label [protected]

Definition at line 217 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_LastStepSeeds [protected]

Definition at line 213 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> double itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_MeanDeviation [protected]

Definition at line 218 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_MinRegion [protected]

Definition at line 211 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_NumberOfBoundary [protected]

Definition at line 215 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> std::vector<int> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_NumberOfPixels [protected]

Definition at line 216 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_NumberOfSeeds [protected]

Definition at line 210 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_NumberOfSeedsToAdded [protected]

Definition at line 214 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> bool itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_OutputBoundary [protected]

Definition at line 220 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> std::vector<PointType> itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_SeedsToAdded [protected]

Definition at line 226 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> SizeType itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_Size [protected]

Definition at line 209 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> int itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_Steps [protected]

Definition at line 212 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> bool itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_UseBackgroundInAPrior [protected]

Definition at line 219 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> VoronoiDiagramGenerator::Pointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_VDGenerator [protected]

Definition at line 224 of file itkVoronoiSegmentationImageFilterBase.h.

template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image<unsigned char,2>> VoronoiDiagram::Pointer itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::m_WorkingVD [protected]

Definition at line 223 of file itkVoronoiSegmentationImageFilterBase.h.

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The documentation for this class was generated from the following file:

• itkVoronoiSegmentationImageFilterBase.h

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