#include <itkNeuralNetworkFileReader.h>
Inheritance diagram for itk::NeuralNetworkFileReader< TNetwork >:
This class will enable the user to load neural network and define weights and other network parameters from a text file.
This class was contributed to the Insight Journal by Raghu Venkatram. The original paper can be found at http://insight-journal.org/midas/handle.php?handle=1926/203
MultilayerNeuralNetworkBase
Definition at line 63 of file itkNeuralNetworkFileReader.h.
Public Types | |
typedef BackPropagationLayerType::Pointer | BackPropagationLayerPointer |
typedef Statistics::BackPropagationLayer< MeasurementVectorType, TargetVectorType > | BackPropagationLayerType |
typedef SmartPointer< const Self > | ConstPointer |
typedef TNetwork::LayerInterfaceType | LayerInterfaceType |
typedef TNetwork::MeasurementVectorType | MeasurementVectorType |
typedef MeasurementVectorType::ValueType | MeasurementVectorValueType |
enum | NetworkWriteWeightsType { IGNORE = 0, ASCII = 1, BINARY = 2 } |
typedef SmartPointer< Self > | Pointer |
typedef NeuralNetworkFileReader | Self |
typedef Object | Superclass |
typedef TNetwork::TargetVectorType | TargetVectorType |
typedef WeightSetType::Pointer | WeightSetPointer |
typedef LayerInterfaceType::WeightSetType | WeightSetType |
Public Member Functions | |
virtual LightObject::Pointer | CreateAnother () const |
virtual void | DebugOff () const |
virtual void | DebugOn () const |
virtual void | Delete () |
Command * | GetCommand (unsigned long tag) |
bool | GetDebug () const |
virtual const char * | GetFileName () const |
const MetaDataDictionary & | GetMetaDataDictionary (void) const |
MetaDataDictionary & | GetMetaDataDictionary (void) |
virtual unsigned long | GetMTime () const |
virtual const char * | GetNameOfClass () const |
TNetwork * | GetOutput () const |
virtual int | GetReferenceCount () const |
bool | HasObserver (const EventObject &event) const |
void | InvokeEvent (const EventObject &) const |
void | InvokeEvent (const EventObject &) |
itkGetEnumMacro (ReadWeightValuesType, NetworkWriteWeightsType) | |
itkSetEnumMacro (ReadWeightValuesType, NetworkWriteWeightsType) | |
virtual void | Modified () const |
void | Print (std::ostream &os, Indent indent=0) const |
virtual void | Register () const |
void | RemoveAllObservers () |
void | RemoveObserver (unsigned long tag) |
void | SetDebug (bool debugFlag) const |
virtual void | SetFileName (const char *_arg) |
void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
virtual void | SetReferenceCount (int) |
virtual void | UnRegister () const |
void | Update (void) |
unsigned long | AddObserver (const EventObject &event, Command *) const |
unsigned long | AddObserver (const EventObject &event, Command *) |
Static Public Member Functions | |
static void | BreakOnError () |
static Pointer | New () |
static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static void | SetGlobalWarningDisplay (bool flag) |
Protected Types | |
typedef int | InternalReferenceCountType |
Protected Member Functions | |
NeuralNetworkFileReader () | |
bool | PrintObservers (std::ostream &os, Indent indent) const |
virtual void | PrintSelf (std::ostream &os, Indent indent) const |
~NeuralNetworkFileReader () | |
virtual void | PrintHeader (std::ostream &os, Indent indent) const |
virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
Protected Attributes | |
InternalReferenceCountType | m_ReferenceCount |
SimpleFastMutexLock | m_ReferenceCountLock |
Classes | |
struct | LineType |
typedef BackPropagationLayerType::Pointer itk::NeuralNetworkFileReader< TNetwork >::BackPropagationLayerPointer |
Definition at line 83 of file itkNeuralNetworkFileReader.h.
typedef Statistics::BackPropagationLayer< MeasurementVectorType, TargetVectorType> itk::NeuralNetworkFileReader< TNetwork >::BackPropagationLayerType |
Definition at line 82 of file itkNeuralNetworkFileReader.h.
typedef SmartPointer<const Self> itk::NeuralNetworkFileReader< TNetwork >::ConstPointer |
typedef int itk::LightObject::InternalReferenceCountType [protected, inherited] |
Define the type of the reference count according to the target. This allows the use of atomic operations
Definition at line 139 of file itkLightObject.h.
typedef TNetwork::LayerInterfaceType itk::NeuralNetworkFileReader< TNetwork >::LayerInterfaceType |
Definition at line 86 of file itkNeuralNetworkFileReader.h.
typedef TNetwork::MeasurementVectorType itk::NeuralNetworkFileReader< TNetwork >::MeasurementVectorType |
Definition at line 77 of file itkNeuralNetworkFileReader.h.
typedef MeasurementVectorType::ValueType itk::NeuralNetworkFileReader< TNetwork >::MeasurementVectorValueType |
Definition at line 84 of file itkNeuralNetworkFileReader.h.
typedef SmartPointer<Self> itk::NeuralNetworkFileReader< TNetwork >::Pointer |
typedef NeuralNetworkFileReader itk::NeuralNetworkFileReader< TNetwork >::Self |
SmartPointer typedef support
Reimplemented from itk::Object.
Definition at line 68 of file itkNeuralNetworkFileReader.h.
typedef Object itk::NeuralNetworkFileReader< TNetwork >::Superclass |
typedef TNetwork::TargetVectorType itk::NeuralNetworkFileReader< TNetwork >::TargetVectorType |
Definition at line 80 of file itkNeuralNetworkFileReader.h.
typedef WeightSetType::Pointer itk::NeuralNetworkFileReader< TNetwork >::WeightSetPointer |
Definition at line 88 of file itkNeuralNetworkFileReader.h.
typedef LayerInterfaceType::WeightSetType itk::NeuralNetworkFileReader< TNetwork >::WeightSetType |
Definition at line 87 of file itkNeuralNetworkFileReader.h.
enum itk::NeuralNetworkFileReader::NetworkWriteWeightsType |
itk::NeuralNetworkFileReader< TNetwork >::NeuralNetworkFileReader | ( | ) | [protected] |
itk::NeuralNetworkFileReader< TNetwork >::~NeuralNetworkFileReader | ( | ) | [protected] |
unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
Command * | ||||
) | const [inherited] |
unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
Command * | ||||
) | [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
static void itk::LightObject::BreakOnError | ( | ) | [static, inherited] |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
virtual LightObject::Pointer itk::Object::CreateAnother | ( | ) | const [virtual, inherited] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
virtual void itk::Object::DebugOff | ( | ) | const [virtual, inherited] |
Turn debugging output off.
virtual void itk::Object::DebugOn | ( | ) | const [virtual, inherited] |
Turn debugging output on.
virtual void itk::LightObject::Delete | ( | ) | [virtual, inherited] |
Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
Command* itk::Object::GetCommand | ( | unsigned long | tag | ) | [inherited] |
Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
bool itk::Object::GetDebug | ( | ) | const [inherited] |
Get the value of the debug flag.
virtual const char* itk::NeuralNetworkFileReader< TNetwork >::GetFileName | ( | ) | const [virtual] |
Get the filename
static bool itk::Object::GetGlobalWarningDisplay | ( | ) | [static, inherited] |
const MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | const [inherited] |
MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | [inherited] |
virtual unsigned long itk::Object::GetMTime | ( | ) | const [virtual, inherited] |
Return this objects modified time.
Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.
Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().
virtual const char* itk::NeuralNetworkFileReader< TNetwork >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::Object.
TNetwork* itk::NeuralNetworkFileReader< TNetwork >::GetOutput | ( | ) | const |
virtual int itk::LightObject::GetReferenceCount | ( | ) | const [inline, virtual, inherited] |
Gets the reference count on this object.
Definition at line 106 of file itkLightObject.h.
static void itk::Object::GlobalWarningDisplayOff | ( | ) | [inline, static, inherited] |
static void itk::Object::GlobalWarningDisplayOn | ( | ) | [inline, static, inherited] |
bool itk::Object::HasObserver | ( | const EventObject & | event | ) | const [inherited] |
Return true if an observer is registered for this event.
void itk::Object::InvokeEvent | ( | const EventObject & | ) | const [inherited] |
Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.
void itk::Object::InvokeEvent | ( | const EventObject & | ) | [inherited] |
Call Execute on all the Commands observing this event id.
itk::NeuralNetworkFileReader< TNetwork >::itkGetEnumMacro | ( | ReadWeightValuesType | , | |
NetworkWriteWeightsType | ||||
) |
itk::NeuralNetworkFileReader< TNetwork >::itkSetEnumMacro | ( | ReadWeightValuesType | , | |
NetworkWriteWeightsType | ||||
) |
virtual void itk::Object::Modified | ( | ) | const [virtual, inherited] |
Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.
Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, itk::RankImageFilter< TInputImage, TInputImage, itk::FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.
Referenced by itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().
static Pointer itk::NeuralNetworkFileReader< TNetwork >::New | ( | ) | [static] |
Method for creation through the object factory
Reimplemented from itk::Object.
void itk::LightObject::Print | ( | std::ostream & | os, | |
Indent | indent = 0 | |||
) | const [inherited] |
Cause the object to print itself out.
Referenced by itk::WeakPointer< itk::ProcessObject >::Print().
virtual void itk::LightObject::PrintHeader | ( | std::ostream & | os, | |
Indent | indent | |||
) | const [protected, virtual, inherited] |
bool itk::Object::PrintObservers | ( | std::ostream & | os, | |
Indent | indent | |||
) | const [protected, inherited] |
virtual void itk::NeuralNetworkFileReader< TNetwork >::PrintSelf | ( | std::ostream & | os, | |
Indent | indent | |||
) | const [protected, virtual] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::Object.
virtual void itk::LightObject::PrintTrailer | ( | std::ostream & | os, | |
Indent | indent | |||
) | const [protected, virtual, inherited] |
virtual void itk::Object::Register | ( | ) | const [virtual, inherited] |
Increase the reference count (mark as used by another object).
Reimplemented from itk::LightObject.
void itk::Object::RemoveAllObservers | ( | ) | [inherited] |
Remove all observers .
void itk::Object::RemoveObserver | ( | unsigned long | tag | ) | [inherited] |
Remove the observer with this tag value.
void itk::Object::SetDebug | ( | bool | debugFlag | ) | const [inherited] |
Set the value of the debug flag. A non-zero value turns debugging on.
virtual void itk::NeuralNetworkFileReader< TNetwork >::SetFileName | ( | const char * | _arg | ) | [virtual] |
Set the filename
static void itk::Object::SetGlobalWarningDisplay | ( | bool | flag | ) | [static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().
void itk::Object::SetMetaDataDictionary | ( | const MetaDataDictionary & | rhs | ) | [inherited] |
virtual void itk::Object::SetReferenceCount | ( | int | ) | [virtual, inherited] |
Sets the reference count (use with care)
Reimplemented from itk::LightObject.
virtual void itk::Object::UnRegister | ( | ) | const [virtual, inherited] |
Decrease the reference count (release by another object).
Reimplemented from itk::LightObject.
void itk::NeuralNetworkFileReader< TNetwork >::Update | ( | void | ) |
Read NeuralNetwork
InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited] |
Number of uses of this object by other objects.
Definition at line 144 of file itkLightObject.h.
SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited] |
Mutex lock to protect modification to the reference count
Definition at line 147 of file itkLightObject.h.