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itk::PCAShapeSignedDistanceFunction

itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage > Class Template Reference
[Image Functions]

#include <itkPCAShapeSignedDistanceFunction.h>

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List of all members.

Detailed Description

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
class itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >

Compute the signed distance from a N-dimensional PCA Shape.

This class computes the signed distance from a N-dimensional shape defined by: (1) a mean signed distance image $ M(x) $, (2) the first $ q $ principal components images $ P_i(x) $ and (3) a transform $ T(x) $ to define the pose (i.e. position or orientation of the shape).

A particular instance of the shape is defined by a set of parameters $ p $. The first $ q $ parameters defines the weights applied to each principal components and the remaining parameters is used to define the transform. The user should refer to the documentation of the particular Transform class being used. The first set of parameters are called the ShapeParameters and the remaining parameters the PoseParameters.

The method Evaluate( point x ) returns the approximate signed to the shape at point x such that:

\[ s = M(T(x)) + \sum_i^{q} p[i] * \sigma[i] * P_i(T(x)) \]

Where [i] are the square root of the eigenvalues. These are defined using method SetPrincipalComponentStandardDeviations().

This class is templated over the coordinate representation type (e.g. float or double) and the space dimension.

See also:
ShapeSignedDistanceFunction

Transform

Definition at line 67 of file itkPCAShapeSignedDistanceFunction.h.

Public Types

typedef SmartPointer< const
Self > 		ConstPointer
typedef Superclass::CoordRepType CoordRepType
typedef ExtrapolatorType::Pointer ExtrapolatorPointer
typedef std::vector< ExtrapolatorPointer > ExtrapolatorPointerVector
typedef ExtrapolateImageFunction<
ImageType, CoordRepType > 		ExtrapolatorType
typedef FunctionType::Pointer FunctionPointer
typedef std::vector< FunctionPointer > FunctionPointerVector
typedef ImageFunction< ImageType,
double, CoordRepType > 		FunctionType
typedef ImageType::Pointer ImagePointer
typedef std::vector< ImagePointer > ImagePointerVector
typedef TImage ImageType
typedef Superclass::InputType InputType
typedef InterpolatorType::Pointer InterpolatorPointer
typedef std::vector< InterpolatorPointer > InterpolatorPointerVector
typedef InterpolateImageFunction<
ImageType, CoordRepType > 		InterpolatorType
typedef Superclass::OutputType OutputType
typedef Superclass::ParametersType ParametersType
typedef SmartPointer< Self > Pointer
typedef Superclass::PointType PointType
typedef PCAShapeSignedDistanceFunction Self
typedef ShapeSignedDistanceFunction<
TCoordRep, VSpaceDimension > 		Superclass
typedef Transform< CoordRepType,
itkGetStaticConstMacro(SpaceDimension),
itkGetStaticConstMacro(SpaceDimension)> 		TransformType

Public Member Functions

virtual LightObject::Pointer CreateAnother () const
virtual void DebugOff () const
virtual void DebugOn () const
virtual void Delete ()
virtual OutputType Evaluate (const InputType &input) const=0
virtual OutputType Evaluate (const InputType &input) const=0
virtual OutputType Evaluate (const PointType &point) const=0
virtual OutputType Evaluate (const PointType &point) const
Command * GetCommand (unsigned long tag)
bool GetDebug () const
const MetaDataDictionary & GetMetaDataDictionary (void) const
MetaDataDictionary & GetMetaDataDictionary (void)
virtual unsigned long GetMTime () const
virtual const char * GetNameOfClass () const
virtual int GetReferenceCount () const
bool HasObserver (const EventObject &event) const
virtual void Initialize () throw ( ExceptionObject )
void InvokeEvent (const EventObject &) const
void InvokeEvent (const EventObject &)
 itkStaticConstMacro (ImageDimension, unsigned int, VImageDimension)
 itkStaticConstMacro (SpaceDimension, unsigned int, VSpaceDimension)
 itkStaticConstMacro (SpaceDimension, unsigned int, Superclass::SpaceDimension)
virtual void Modified () const
void Print (std::ostream &os, Indent indent=0) const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
unsigned long AddObserver (const EventObject &event, Command *) const
unsigned long AddObserver (const EventObject &event, Command *)
virtual ImageType * GetMeanImage ()
virtual void SetMeanImage (ImageType *_arg)
virtual unsigned int GetNumberOfParameters (void) const
virtual ParametersType & GetParameters (void)
virtual unsigned int GetNumberOfPoseParameters (void) const
virtual unsigned int GetNumberOfShapeParameters (void) const
virtual void SetParameters (const ParametersType &)
virtual unsigned int GetNumberOfPrincipalComponents ()
void SetNumberOfPrincipalComponents (unsigned int n)
virtual ParametersType GetPrincipalComponentStandardDeviations ()
virtual void SetPrincipalComponentStandardDeviations (ParametersType _arg)
virtual TransformType * GetTransform ()
virtual void SetTransform (TransformType *_arg)
void SetPrincipalComponentImages (ImagePointerVector v)

Static Public Member Functions

static void BreakOnError ()
static Pointer New ()
static bool GetGlobalWarningDisplay ()
static void GlobalWarningDisplayOff ()
static void GlobalWarningDisplayOn ()
static void SetGlobalWarningDisplay (bool flag)

Protected Types

typedef int InternalReferenceCountType

Protected Member Functions

 PCAShapeSignedDistanceFunction ()
bool PrintObservers (std::ostream &os, Indent indent) const
void PrintSelf (std::ostream &os, Indent indent) const
 ~PCAShapeSignedDistanceFunction ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const

Protected Attributes

ParametersType m_Parameters
InternalReferenceCountType m_ReferenceCount
SimpleFastMutexLock m_ReferenceCountLock

Member Typedef Documentation

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef SmartPointer<const Self> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::ConstPointer

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 77 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef Superclass::CoordRepType itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::CoordRepType

CoordRep typedef support.

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 91 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef ExtrapolatorType::Pointer itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::ExtrapolatorPointer

Definition at line 123 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef std::vector<ExtrapolatorPointer> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::ExtrapolatorPointerVector

Definition at line 124 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef ExtrapolateImageFunction<ImageType, CoordRepType> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::ExtrapolatorType

extrapolator typedef support.

Definition at line 122 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef FunctionType::Pointer itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::FunctionPointer

Definition at line 128 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef std::vector<FunctionPointer> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::FunctionPointerVector

Definition at line 129 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef ImageFunction<ImageType, double, CoordRepType> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::FunctionType

function typedef support.

Definition at line 127 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef ImageType::Pointer itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::ImagePointer

Definition at line 108 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef std::vector<ImagePointer> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::ImagePointerVector

Definition at line 109 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef TImage itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::ImageType

Image typedef support.

Definition at line 107 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef Superclass::InputType itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::InputType

InputeType typedef support.

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 94 of file itkPCAShapeSignedDistanceFunction.h.

typedef int itk::LightObject::InternalReferenceCountType [protected, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 139 of file itkLightObject.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef InterpolatorType::Pointer itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::InterpolatorPointer

Definition at line 118 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef std::vector<InterpolatorPointer> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::InterpolatorPointerVector

Definition at line 119 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef InterpolateImageFunction<ImageType, CoordRepType> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::InterpolatorType

Interpolator typedef support.

Definition at line 117 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef Superclass::OutputType itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::OutputType

OutputType typedef support.

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 97 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef Superclass::ParametersType itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::ParametersType

Parameters typedef support.

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 103 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef SmartPointer<Self> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::Pointer

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 76 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef Superclass::PointType itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::PointType

Point typedef support.

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 100 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef PCAShapeSignedDistanceFunction itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::Self

Standard class typedefs.

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 73 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::Superclass

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 75 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
typedef Transform<CoordRepType, itkGetStaticConstMacro(SpaceDimension), itkGetStaticConstMacro(SpaceDimension)> itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::TransformType

Transform typedef support.

Definition at line 114 of file itkPCAShapeSignedDistanceFunction.h.

Constructor & Destructor Documentation

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::PCAShapeSignedDistanceFunction (  )  [protected]

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::~PCAShapeSignedDistanceFunction (  )  [inline, protected]

Definition at line 180 of file itkPCAShapeSignedDistanceFunction.h.

Member Function Documentation

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) const [inherited]

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) [inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

static void itk::LightObject::BreakOnError (  )  [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

virtual LightObject::Pointer itk::Object::CreateAnother (  )  const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

virtual void itk::Object::DebugOff (  )  const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn (  )  const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete (  )  [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

template<class TInput, class TOutput>
virtual OutputType itk::FunctionBase< TInput, TOutput >::Evaluate ( const InputType &  input  )  const [pure virtual, inherited]

Evaluate at the specified input position

Implemented in itk::BinaryThresholdSpatialFunction< TFunction >, itk::BSplineDerivativeKernelFunction< VSplineOrder >, itk::BSplineKernelFunction< VSplineOrder >, itk::GaussianDerivativeSpatialFunction< TOutput, VImageDimension, TInput >, itk::GaussianKernelFunction, itk::GaussianSpatialFunction< TOutput, VImageDimension, TInput >, itk::KernelFunction, itk::Statistics::ErrorFunctionBase< TMeasurementVector, TTargetVector >, itk::Statistics::GaussianRadialBasisFunction< ScalarType >, itk::Statistics::GaussianTransferFunction< ScalarType >, itk::Statistics::HardLimitTransferFunction< ScalarType >, itk::Statistics::IdentityTransferFunction< ScalarType >, itk::Statistics::InputFunctionBase< TMeasurementVector, TTargetVector >, itk::Statistics::LogSigmoidTransferFunction< ScalarType >, itk::Statistics::MeanSquaredErrorFunction< TMeasurementVector, ScalarType >, itk::Statistics::MultiquadricRadialBasisFunction< ScalarType >, itk::Statistics::NNetDistanceMetricBase< TMeasurementVector >, itk::Statistics::ProductInputFunction< TMeasurementVector, ScalarType >, itk::Statistics::RadialBasisFunctionBase< ScalarType >, itk::Statistics::SigmoidTransferFunction< ScalarType >, itk::Statistics::SignedHardLimitTransferFunction< ScalarType >, itk::Statistics::SquaredDifferenceErrorFunction< TMeasurementVector, ScalarType >, itk::Statistics::SumInputFunction< TMeasurementVector, ScalarType >, itk::Statistics::SymmetricSigmoidTransferFunction< ScalarType >, itk::Statistics::TanHTransferFunction< ScalarType >, itk::Statistics::TanSigmoidTransferFunction< ScalarType >, itk::Statistics::TransferFunctionBase< ScalarType >, itk::Statistics::DensityFunction< TMeasurementVector >, itk::Statistics::DistanceMetric< TVector >, itk::Statistics::DistanceToCentroidMembershipFunction< TVector >, itk::Statistics::EuclideanDistance< TVector >, itk::Statistics::GaussianDensityFunction< TMeasurementVector >, itk::Statistics::MahalanobisDistanceMembershipFunction< TVector >, itk::Statistics::MembershipFunctionBase< TVector >, itk::CoxDeBoorBSplineKernelFunction< VSplineOrder >, itk::SpatialFunction< double, VSpaceDimension, itk::Point< TCoordRep, VSpaceDimension > >, itk::Statistics::ErrorFunctionBase< TMeasurementVector, ScalarType >, itk::Statistics::InputFunctionBase< TMeasurementVector, ScalarType >, itk::Statistics::DistanceMetric< itk::Array< double > >, itk::Statistics::EuclideanDistance< itk::Array< double > >, itk::Statistics::MembershipFunctionBase< itk::Array< double > >, and itk::Statistics::MembershipFunctionBase< TMeasurementVector >.

template<typename TOutput, unsigned int VImageDimension = 3, typename TInput = Point<double, VImageDimension>>
virtual OutputType itk::SpatialFunction< TOutput, VImageDimension, TInput >::Evaluate ( const InputType &  input  )  const [pure virtual, inherited]

Evaluate the function at a given position. Remember, position is represented by an n-d itk::Point object with data type double.

Implemented in itk::ConicShellInteriorExteriorSpatialFunction< VDimension, TInput >, itk::EllipsoidInteriorExteriorSpatialFunction< VDimension, TInput >, itk::FiniteCylinderSpatialFunction< VDimension, TInput >, itk::FrustumSpatialFunction< VImageDimension, TInput >, itk::InteriorExteriorSpatialFunction< VDimension, TInput >, itk::SphereSpatialFunction< VImageDimension, TInput >, itk::SymmetricEllipsoidInteriorExteriorSpatialFunction< VDimension, TInput >, itk::TorusInteriorExteriorSpatialFunction< VDimension, TInput >, and itk::InteriorExteriorSpatialFunction< VImageDimension, TInput >.

template<typename TCoordRep, unsigned int VSpaceDimension>
virtual OutputType itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >::Evaluate ( const PointType &  point  )  const [pure virtual, inherited]

Evaluate the signed distance from a shape at a given position.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual OutputType itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::Evaluate ( const PointType &  point  )  const [virtual]

Evaluate the signed distance from a shape at a given position.

Command* itk::Object::GetCommand ( unsigned long  tag  )  [inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

bool itk::Object::GetDebug (  )  const [inherited]

Get the value of the debug flag.

static bool itk::Object::GetGlobalWarningDisplay (  )  [static, inherited]

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual ImageType* itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::GetMeanImage (  )  [virtual]

const MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  const [inherited]

Returns:
A constant reference to this objects MetaDataDictionary.

MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  [inherited]

Returns:
A reference to this objects MetaDataDictionary.
Warning:
This reference may be changed.

virtual unsigned long itk::Object::GetMTime (  )  const [virtual, inherited]

Return this objects modified time.

Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.

Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual const char* itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::GetNameOfClass (  )  const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

template<typename TCoordRep, unsigned int VSpaceDimension>
virtual unsigned int itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >::GetNumberOfParameters ( void   )  const [inline, virtual, inherited]

Definition at line 88 of file itkShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual unsigned int itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::GetNumberOfPoseParameters ( void   )  const [inline, virtual]

Implements itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 166 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual unsigned int itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::GetNumberOfPrincipalComponents (  )  [virtual]

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual unsigned int itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::GetNumberOfShapeParameters ( void   )  const [inline, virtual]

Implements itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

Definition at line 164 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension>
virtual ParametersType& itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >::GetParameters ( void   )  [inline, virtual, inherited]

Definition at line 84 of file itkShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual ParametersType itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::GetPrincipalComponentStandardDeviations (  )  [virtual]

virtual int itk::LightObject::GetReferenceCount (  )  const [inline, virtual, inherited]

Gets the reference count on this object.

Definition at line 106 of file itkLightObject.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual TransformType* itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::GetTransform (  )  [virtual]

static void itk::Object::GlobalWarningDisplayOff (  )  [inline, static, inherited]

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

static void itk::Object::GlobalWarningDisplayOn (  )  [inline, static, inherited]

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

bool itk::Object::HasObserver ( const EventObject &  event  )  const [inherited]

Return true if an observer is registered for this event.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual void itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::Initialize (  )  throw ( ExceptionObject ) [virtual]

Initialize must be called before the first call of Evaluate() to allow the class to validate any inputs.

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

void itk::Object::InvokeEvent ( const EventObject &   )  const [inherited]

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

void itk::Object::InvokeEvent ( const EventObject &   )  [inherited]

Call Execute on all the Commands observing this event id.

template<typename TOutput, unsigned int VImageDimension = 3, typename TInput = Point<double, VImageDimension>>
itk::SpatialFunction< TOutput, VImageDimension, TInput >::itkStaticConstMacro ( ImageDimension  ,
unsigned  int,
VImageDimension   
) [inherited]

Spatial dimension.

template<typename TCoordRep, unsigned int VSpaceDimension>
itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >::itkStaticConstMacro ( SpaceDimension  ,
unsigned  int,
VSpaceDimension   
) [inherited]

Dimension underlying input image.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::itkStaticConstMacro ( SpaceDimension  ,
unsigned  int,
Superclass::SpaceDimension   
)

Dimension underlying input image.

virtual void itk::Object::Modified (  )  const [virtual, inherited]

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, itk::RankImageFilter< TInputImage, TInputImage, itk::FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.

Referenced by itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
static Pointer itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::New (  )  [static]

New macro for creation of through the object factory.

Reimplemented from itk::Object.

void itk::LightObject::Print ( std::ostream &  os,
Indent  indent = 0 
) const [inherited]

Cause the object to print itself out.

Referenced by itk::WeakPointer< itk::ProcessObject >::Print().

virtual void itk::LightObject::PrintHeader ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

bool itk::Object::PrintObservers ( std::ostream &  os,
Indent  indent 
) const [protected, inherited]

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
void itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

virtual void itk::LightObject::PrintTrailer ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

virtual void itk::Object::Register (  )  const [virtual, inherited]

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

void itk::Object::RemoveAllObservers (  )  [inherited]

Remove all observers .

void itk::Object::RemoveObserver ( unsigned long  tag  )  [inherited]

Remove the observer with this tag value.

void itk::Object::SetDebug ( bool  debugFlag  )  const [inherited]

Set the value of the debug flag. A non-zero value turns debugging on.

static void itk::Object::SetGlobalWarningDisplay ( bool  flag  )  [static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual void itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::SetMeanImage ( ImageType *  _arg  )  [virtual]

Set/Get the mean image.

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary &  rhs  )  [inherited]

Returns:
Set the MetaDataDictionary

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
void itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::SetNumberOfPrincipalComponents ( unsigned int  n  ) 

Set/Get the number of principal components SetNumberOfPrincipalComponents must be called before SetParameters

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual void itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::SetParameters ( const ParametersType &   )  [virtual]

A PCAShape is defined by a set of shape and pose parameters.

Implements itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
void itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::SetPrincipalComponentImages ( ImagePointerVector  v  )  [inline]

Set/Get the principal component images.

Definition at line 144 of file itkPCAShapeSignedDistanceFunction.h.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual void itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::SetPrincipalComponentStandardDeviations ( ParametersType  _arg  )  [virtual]

Set/Get the principal component standard deviations. These values corresponds to the square root of the eigenvalues of the principal components.

virtual void itk::Object::SetReferenceCount ( int   )  [virtual, inherited]

Sets the reference count (use with care)

Reimplemented from itk::LightObject.

template<typename TCoordRep, unsigned int VSpaceDimension, typename TImage = Image<double,VSpaceDimension>>
virtual void itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >::SetTransform ( TransformType *  _arg  )  [virtual]

Set/Get transform.

virtual void itk::Object::UnRegister (  )  const [virtual, inherited]

Decrease the reference count (release by another object).

Reimplemented from itk::LightObject.

Member Data Documentation

template<typename TCoordRep, unsigned int VSpaceDimension>
ParametersType itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >::m_Parameters [protected, inherited]

Definition at line 111 of file itkShapeSignedDistanceFunction.h.

InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects.

Definition at line 144 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count

Definition at line 147 of file itkLightObject.h.

The documentation for this class was generated from the following file:
Generated at Thu Nov 6 09:37:46 2008 for ITK by doxygen 1.5.1 written by Dimitri van Heesch, © 1997-2000