#include <itkShapePriorMAPCostFunction.h>
Inheritance diagram for itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >:
This class follows the shape and pose parameters estimation developed in [1]. Note that this class returns the negative log of the MAP function. Using the negative function make this cost function compatible with generic optimizers which seeks the minimum of a cost function.
This class has two template parameters, the feature image type representing the edge potential map and the pixel type used to represent the output level set in the ShapePriorSegmentationLevelSetImageFilter.
Definition at line 49 of file itkShapePriorMAPCostFunction.h.
| typedef Array<double> itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ArrayType |
Type of the array for storing shape parameter mean and standard deivation.
Definition at line 92 of file itkShapePriorMAPCostFunction.h.
| typedef SmartPointer<const Self> itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ConstPointer |
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 57 of file itkShapePriorMAPCostFunction.h.
typedef Superclass::DerivativeType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::DerivativeType [inherited] |
DerivativeType typedef. It defines a type used to return the cost function derivative.
Reimplemented from itk::SingleValuedCostFunction.
Definition at line 66 of file itkShapePriorMAPCostFunctionBase.h.
| typedef Superclass::FeatureImagePointer itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::FeatureImagePointer |
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 71 of file itkShapePriorMAPCostFunction.h.
| typedef Superclass::FeatureImageType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::FeatureImageType |
Type of the feature image representing the edge potential map.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 70 of file itkShapePriorMAPCostFunction.h.
typedef int itk::LightObject::InternalReferenceCountType [protected, inherited] |
Define the type of the reference count according to the target. This allows the use of atomic operations
Definition at line 139 of file itkLightObject.h.
| typedef Superclass::MeasureType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::MeasureType |
Type of the return measure value.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 74 of file itkShapePriorMAPCostFunction.h.
typedef NodeContainerType::ConstPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::NodeContainerPointer [inherited] |
Definition at line 87 of file itkShapePriorMAPCostFunctionBase.h.
| typedef Superclass::NodeContainerType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::NodeContainerType |
Type of container used to store the level set nodes.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 86 of file itkShapePriorMAPCostFunction.h.
| typedef Superclass::NodeType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::NodeType |
Type of node used to represent the active region around the zero set.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 83 of file itkShapePriorMAPCostFunction.h.
| typedef Superclass::ParametersType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ParametersType |
ParametersType typedef. It defines a position in the optimization search space.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 63 of file itkShapePriorMAPCostFunction.h.
typedef double itk::CostFunction::ParametersValueType [inherited] |
ParametersType typedef. It defines a position in the optimization search space.
Definition at line 46 of file itkCostFunction.h.
| typedef Superclass::PixelType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::PixelType |
Type of pixel used to represent the level set.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 80 of file itkShapePriorMAPCostFunction.h.
| typedef SmartPointer<Self> itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::Pointer |
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 56 of file itkShapePriorMAPCostFunction.h.
| typedef ShapePriorMAPCostFunction itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::Self |
Standard class typedefs.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 54 of file itkShapePriorMAPCostFunction.h.
typedef ShapeFunctionType::Pointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ShapeFunctionPointer [inherited] |
Definition at line 92 of file itkShapePriorMAPCostFunctionBase.h.
| typedef Superclass::ShapeFunctionType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ShapeFunctionType |
Type of the shape signed distance function.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 89 of file itkShapePriorMAPCostFunction.h.
| typedef ShapePriorMAPCostFunctionBase<TFeatureImage,TOutputPixel> itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::Superclass |
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
Definition at line 55 of file itkShapePriorMAPCostFunction.h.
| typedef FixedArray<double,4> itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::WeightsType |
Set/Get the weights for each term. Default is a vector of all ones. The weights are applied to terms in the following order: LogInsideTerm, LogGradientTerm, LogShapePriorTerm and LogPosePriorTerm.
Definition at line 101 of file itkShapePriorMAPCostFunction.h.
| itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ShapePriorMAPCostFunction | ( | ) | [protected] |
| virtual itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::~ShapePriorMAPCostFunction | ( | ) | [inline, protected, virtual] |
Definition at line 143 of file itkShapePriorMAPCostFunction.h.
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | const [inherited] |
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| static void itk::LightObject::BreakOnError | ( | ) | [static, inherited] |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
| virtual MeasureType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ComputeLogGradientTerm | ( | const ParametersType & | parameters | ) | const [virtual] |
Compute the gradient term component of the MAP cost function. In particular, this method assume that ( 1 - FeatureImage ) approximates a Gaussian (zero mean, unit variance) algon the normal of the evolving contour. The gradient term is then given by a Laplacian of the goodness of fit of the Gaussian.
Implements itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
| virtual MeasureType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ComputeLogInsideTerm | ( | const ParametersType & | parameters | ) | const [virtual] |
Compute the inside term component of the MAP cost function. In particular, the method sums the number of pixels inside the current contour (defined by nodes of the active region that are less than zero) which are outside the shape specified by the input parameters.
Implements itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
| virtual MeasureType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ComputeLogPosePriorTerm | ( | const ParametersType & | parameters | ) | const [virtual] |
Compute the pose prior component of the MAP cost function. In particular, this method assumes that the pose parameters are uniformly distributed and returns a constant of zero.
Implements itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
| virtual MeasureType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::ComputeLogShapePriorTerm | ( | const ParametersType & | parameters | ) | const [virtual] |
Compute the shape prior component of the MAP cost function. In particular, the method assumes that the shape parameters comes from independent Gaussian distributions defined by the ShapeParameterMeans and ShapeParameterVariances array.
Implements itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
| virtual LightObject::Pointer itk::Object::CreateAnother | ( | ) | const [virtual, inherited] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
| virtual void itk::Object::DebugOff | ( | ) | const [virtual, inherited] |
Turn debugging output off.
| virtual void itk::Object::DebugOn | ( | ) | const [virtual, inherited] |
Turn debugging output on.
| virtual void itk::LightObject::Delete | ( | ) | [virtual, inherited] |
Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
| virtual const NodeContainerType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetActiveRegion | ( | ) | [virtual, inherited] |
| Command* itk::Object::GetCommand | ( | unsigned long | tag | ) | [inherited] |
Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
| bool itk::Object::GetDebug | ( | ) | const [inherited] |
Get the value of the debug flag.
| virtual void itk::SingleValuedCostFunction::GetDerivative | ( | const ParametersType & | parameters, | |
| DerivativeType & | derivative | |||
| ) | const [pure virtual, inherited] |
This method returns the derivative of the cost function corresponding to the specified parameters.
Implemented in itk::Statistics::GoodnessOfFitMixtureModelCostFunction< TInputSample >.
| virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetDerivative | ( | const ParametersType & | , | |
| DerivativeType & | ||||
| ) | const [inline, virtual, inherited] |
This method returns the derivative of the cost function corresponding to the specified parameters.
Definition at line 116 of file itkShapePriorMAPCostFunctionBase.h.
References itkExceptionMacro.
| virtual const FeatureImageType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetFeatureImage | ( | ) | [virtual, inherited] |
| static bool itk::Object::GetGlobalWarningDisplay | ( | ) | [static, inherited] |
| const MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | const [inherited] |
| MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | [inherited] |
| virtual unsigned long itk::Object::GetMTime | ( | ) | const [virtual, inherited] |
Return this objects modified time.
Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.
Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().
| virtual const char* itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
| virtual unsigned int itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetNumberOfParameters | ( | void | ) | const [inline, virtual, inherited] |
Return the number of parameters.
Implements itk::CostFunction.
Definition at line 120 of file itkShapePriorMAPCostFunctionBase.h.
| virtual int itk::LightObject::GetReferenceCount | ( | ) | const [inline, virtual, inherited] |
Gets the reference count on this object.
Definition at line 106 of file itkLightObject.h.
| virtual ShapeFunctionType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetShapeFunction | ( | ) | [virtual, inherited] |
| virtual ArrayType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::GetShapeParameterMeans | ( | ) | [virtual] |
| virtual ArrayType itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::GetShapeParameterStandardDeviations | ( | ) | [virtual] |
| virtual MeasureType itk::SingleValuedCostFunction::GetValue | ( | const ParametersType & | parameters | ) | const [pure virtual, inherited] |
This method returns the value of the cost function corresponding to the specified parameters.
Implemented in itk::Statistics::GoodnessOfFitMixtureModelCostFunction< TInputSample >.
| virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetValue | ( | const ParametersType & | parameters | ) | const [virtual, inherited] |
This method returns the value of the cost function corresponding to the specified parameters.
| virtual void itk::SingleValuedCostFunction::GetValueAndDerivative | ( | const ParametersType & | parameters, | |
| MeasureType & | value, | |||
| DerivativeType & | derivative | |||
| ) | const [inline, virtual, inherited] |
This method returns the value and derivative of the cost function corresponding to the specified parameters
Definition at line 71 of file itkSingleValuedCostFunction.h.
| virtual const WeightsType& itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::GetWeights | ( | ) | [virtual] |
Set/Get the weights for each term. Default is a vector of all ones. The weights are applied to terms in the following order: LogInsideTerm, LogGradientTerm, LogShapePriorTerm and LogPosePriorTerm.
| static void itk::Object::GlobalWarningDisplayOff | ( | ) | [inline, static, inherited] |
| static void itk::Object::GlobalWarningDisplayOn | ( | ) | [inline, static, inherited] |
| bool itk::Object::HasObserver | ( | const EventObject & | event | ) | const [inherited] |
Return true if an observer is registered for this event.
| virtual void itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::Initialize | ( | void | ) | throw ( ExceptionObject ) [virtual] |
Initialize the cost function by making sure that all the components are present.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | const [inherited] |
Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | [inherited] |
Call Execute on all the Commands observing this event id.
| itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::itkStaticConstMacro | ( | ImageDimension | , | |
| unsigned | int, | |||
| TFeatureImage::ImageDimension | ||||
| ) |
Dimension constant.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
| virtual void itk::Object::Modified | ( | ) | const [virtual, inherited] |
Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.
Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, itk::RankImageFilter< TInputImage, TInputImage, itk::FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.
Referenced by itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().
| static Pointer itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::Object.
| void itk::LightObject::Print | ( | std::ostream & | os, | |
| Indent | indent = 0 | |||
| ) | const [inherited] |
Cause the object to print itself out.
Referenced by itk::WeakPointer< itk::ProcessObject >::Print().
| virtual void itk::LightObject::PrintHeader | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| bool itk::Object::PrintObservers | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, inherited] |
| void itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::PrintSelf | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >.
| virtual void itk::LightObject::PrintTrailer | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| virtual void itk::Object::Register | ( | ) | const [virtual, inherited] |
Increase the reference count (mark as used by another object).
Reimplemented from itk::LightObject.
| void itk::Object::RemoveAllObservers | ( | ) | [inherited] |
Remove all observers .
| void itk::Object::RemoveObserver | ( | unsigned long | tag | ) | [inherited] |
Remove the observer with this tag value.
| virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetActiveRegion | ( | const NodeContainerType * | _arg | ) | [virtual, inherited] |
Set/Get the active region.
| void itk::Object::SetDebug | ( | bool | debugFlag | ) | const [inherited] |
Set the value of the debug flag. A non-zero value turns debugging on.
| virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetFeatureImage | ( | const FeatureImageType * | _arg | ) | [virtual, inherited] |
Set/Get the feature image.
| static void itk::Object::SetGlobalWarningDisplay | ( | bool | flag | ) | [static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().
| void itk::Object::SetMetaDataDictionary | ( | const MetaDataDictionary & | rhs | ) | [inherited] |
| virtual void itk::Object::SetReferenceCount | ( | int | ) | [virtual, inherited] |
Sets the reference count (use with care)
Reimplemented from itk::LightObject.
| virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetShapeFunction | ( | ShapeFunctionType * | _arg | ) | [virtual, inherited] |
Set/Get the shape distance function.
| virtual void itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::SetShapeParameterMeans | ( | ArrayType | _arg | ) | [virtual] |
Set/Get the array of shape parameters mean.
| virtual void itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::SetShapeParameterStandardDeviations | ( | ArrayType | _arg | ) | [virtual] |
Set/Get the array of shape parameters standard deviation.
| virtual void itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >::SetWeights | ( | WeightsType | _arg | ) | [virtual] |
Set/Get the weights for each term. Default is a vector of all ones. The weights are applied to terms in the following order: LogInsideTerm, LogGradientTerm, LogShapePriorTerm and LogPosePriorTerm.
| virtual void itk::Object::UnRegister | ( | ) | const [virtual, inherited] |
Decrease the reference count (release by another object).
Reimplemented from itk::LightObject.
NodeContainerPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_ActiveRegion [protected, inherited] |
Definition at line 152 of file itkShapePriorMAPCostFunctionBase.h.
FeatureImagePointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_FeatureImage [protected, inherited] |
Definition at line 153 of file itkShapePriorMAPCostFunctionBase.h.
InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited] |
Number of uses of this object by other objects.
Definition at line 144 of file itkLightObject.h.
SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited] |
Mutex lock to protect modification to the reference count
Definition at line 147 of file itkLightObject.h.
ShapeFunctionPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_ShapeFunction [protected, inherited] |
Definition at line 151 of file itkShapePriorMAPCostFunctionBase.h.
1.5.1 written by Dimitri van Heesch,
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