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itk::bio::CellularAggregate

itk::bio::CellularAggregate< NSpaceDimension > Class Template Reference

#include <itkBioCellularAggregate.h>

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List of all members.

Detailed Description

template<unsigned int NSpaceDimension = 3>
class itk::bio::CellularAggregate< NSpaceDimension >

This class represent an aggregation of bio::Cell objects This class is the base for different types of cellular groups including bacterial colonies and pluricellular organisms.

Definition at line 41 of file itkBioCellularAggregate.h.

Public Types

typedef Cell< NSpaceDimension > BioCellType
typedef MeshType::CellAutoPointer CellAutoPointer
typedef CellInterface< typename
MeshType::CellPixelType, typename
MeshType::CellTraits > 		CellInterfaceType
typedef double CellPixelType
typedef PointDataContainer::ConstIterator CellsConstIterator
typedef PointDataContainer::Iterator CellsIterator
typedef SmartPointer< const
Self > 		ConstPointer
typedef MeshType::PointIdentifier IdentifierType
typedef float ImagePixelType
typedef MeshType::ConstPointer MeshConstPointer
typedef MeshType::Pointer MeshPointer
typedef DefaultDynamicMeshTraits<
PointPixelType, NSpaceDimension,
NSpaceDimension, double,
double, CellPixelType > 		MeshTraits
typedef Mesh< PointPixelType,
NSpaceDimension, MeshTraits > 		MeshType
typedef MeshType::PointDataContainer PointDataContainer
typedef SmartPointer< Self > Pointer
typedef BioCellType * PointPixelType
typedef PointsContainer::ConstIterator PointsConstIterator
typedef MeshType::PointsContainer PointsContainer
typedef PointsContainer::Iterator PointsIterator
typedef MeshType::PointType PointType
typedef CellularAggregate Self
typedef SubstrateType::Pointer SubstratePointer
typedef std::vector< SubstratePointer > SubstratesVector
typedef Image< ImagePixelType,
NSpaceDimension > 		SubstrateType
typedef ImagePixelType SubstrateValueType
typedef CellularAggregateBase Superclass
typedef BioCellType::VectorType VectorType
typedef VoronoiRegionsContainer::ConstIterator VoronoiConstIterator
typedef VoronoiRegionsContainer::Iterator VoronoiIterator
typedef VoronoiRegionType::SelfAutoPointer VoronoiRegionAutoPointer
typedef MeshType::CellsContainer VoronoiRegionsContainer
typedef PolygonCell< CellInterfaceType > VoronoiRegionType

Public Member Functions

virtual void Add (CellBase *cellA, CellBase *cellB, double perturbationLength)
virtual void Add (CellBase *cell, const VectorType &perturbation)
virtual void Add (CellBase *cell)
virtual void AddSubstrate (SubstrateType *substrate)
virtual void AdvanceTimeStep (void)
virtual LightObject::Pointer CreateAnother () const
virtual void DebugOff () const
virtual void DebugOn () const
virtual void Delete ()
void DumpContent (std::ostream &os) const
Command * GetCommand (unsigned long tag)
bool GetDebug () const
virtual const MeshType * GetMesh ()
virtual MeshType * GetMesh ()
const MetaDataDictionary & GetMetaDataDictionary (void) const
MetaDataDictionary & GetMetaDataDictionary (void)
virtual unsigned long GetMTime () const
virtual const char * GetNameOfClass () const
unsigned int GetNumberOfCells (void) const
virtual int GetReferenceCount () const
virtual SubstratesVector & GetSubstrates (void)
virtual SubstrateValueType GetSubstrateValue (unsigned long int cellId, unsigned int substrateId) const
virtual void GetVoronoi (unsigned long int cellId, VoronoiRegionAutoPointer &) const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &) const
void InvokeEvent (const EventObject &)
 itkStaticConstMacro (SpaceDimension, unsigned int, NSpaceDimension)
virtual void KillAll (void)
virtual void Modified () const
void Print (std::ostream &os, Indent indent=0) const
virtual void Register () const
virtual void Remove (CellBase *cell)
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
virtual void SetEgg (BioCellType *cell, const PointType &position)
void SetGrowthRadiusIncrement (double value)
void SetGrowthRadiusLimit (double value)
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
unsigned long AddObserver (const EventObject &event, Command *) const
unsigned long AddObserver (const EventObject &event, Command *)

Static Public Member Functions

static void BreakOnError ()
static unsigned int GetDimension ()
static Pointer New ()
static bool GetGlobalWarningDisplay ()
static void GlobalWarningDisplayOff ()
static void GlobalWarningDisplayOn ()
static void SetGlobalWarningDisplay (bool flag)

Protected Types

typedef int InternalReferenceCountType

Protected Member Functions

 CellularAggregate (const Self &)
 CellularAggregate ()
virtual void ClearForces (void)
virtual void ComputeClosestPoints (void)
virtual void ComputeForces (void)
void operator= (const Self &)
bool PrintObservers (std::ostream &os, Indent indent) const
void PrintSelf (std::ostream &os, Indent indent) const
virtual void UpdatePositions (void)
virtual ~CellularAggregate ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const

Protected Attributes

InternalReferenceCountType m_ReferenceCount
SimpleFastMutexLock m_ReferenceCountLock

Member Typedef Documentation

template<unsigned int NSpaceDimension = 3>
typedef Cell<NSpaceDimension> itk::bio::CellularAggregate< NSpaceDimension >::BioCellType

Definition at line 59 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef MeshType::CellAutoPointer itk::bio::CellularAggregate< NSpaceDimension >::CellAutoPointer

Definition at line 96 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef CellInterface< typename MeshType::CellPixelType, typename MeshType::CellTraits > itk::bio::CellularAggregate< NSpaceDimension >::CellInterfaceType

Voronoi region around a bio::Cell

Definition at line 101 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef double itk::bio::CellularAggregate< NSpaceDimension >::CellPixelType

Definition at line 61 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef PointDataContainer::ConstIterator itk::bio::CellularAggregate< NSpaceDimension >::CellsConstIterator

Definition at line 93 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef PointDataContainer::Iterator itk::bio::CellularAggregate< NSpaceDimension >::CellsIterator

Definition at line 90 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef SmartPointer<const Self> itk::bio::CellularAggregate< NSpaceDimension >::ConstPointer

Reimplemented from itk::bio::CellularAggregateBase.

Definition at line 48 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef MeshType::PointIdentifier itk::bio::CellularAggregate< NSpaceDimension >::IdentifierType

Definition at line 95 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef float itk::bio::CellularAggregate< NSpaceDimension >::ImagePixelType

Convenient typedefs.

Reimplemented from itk::bio::CellularAggregateBase.

Definition at line 106 of file itkBioCellularAggregate.h.

typedef int itk::LightObject::InternalReferenceCountType [protected, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 139 of file itkLightObject.h.

template<unsigned int NSpaceDimension = 3>
typedef MeshType::ConstPointer itk::bio::CellularAggregate< NSpaceDimension >::MeshConstPointer

Definition at line 81 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef MeshType::Pointer itk::bio::CellularAggregate< NSpaceDimension >::MeshPointer

Mesh Associated types

Definition at line 80 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef DefaultDynamicMeshTraits< PointPixelType, NSpaceDimension, NSpaceDimension, double, double, CellPixelType > itk::bio::CellularAggregate< NSpaceDimension >::MeshTraits

Mesh Traits

Definition at line 72 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef Mesh< PointPixelType, NSpaceDimension, MeshTraits > itk::bio::CellularAggregate< NSpaceDimension >::MeshType

Mesh Traits

Definition at line 77 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef MeshType::PointDataContainer itk::bio::CellularAggregate< NSpaceDimension >::PointDataContainer

Definition at line 87 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef SmartPointer<Self> itk::bio::CellularAggregate< NSpaceDimension >::Pointer

Reimplemented from itk::bio::CellularAggregateBase.

Definition at line 47 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef BioCellType* itk::bio::CellularAggregate< NSpaceDimension >::PointPixelType

Definition at line 60 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef PointsContainer::ConstIterator itk::bio::CellularAggregate< NSpaceDimension >::PointsConstIterator

Definition at line 92 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef MeshType::PointsContainer itk::bio::CellularAggregate< NSpaceDimension >::PointsContainer

Definition at line 86 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef PointsContainer::Iterator itk::bio::CellularAggregate< NSpaceDimension >::PointsIterator

Definition at line 89 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef MeshType::PointType itk::bio::CellularAggregate< NSpaceDimension >::PointType

Definition at line 82 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef CellularAggregate itk::bio::CellularAggregate< NSpaceDimension >::Self

Standard class typedefs.

Reimplemented from itk::bio::CellularAggregateBase.

Definition at line 45 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef SubstrateType::Pointer itk::bio::CellularAggregate< NSpaceDimension >::SubstratePointer

Definition at line 108 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef std::vector< SubstratePointer > itk::bio::CellularAggregate< NSpaceDimension >::SubstratesVector

Definition at line 110 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef Image<ImagePixelType, NSpaceDimension > itk::bio::CellularAggregate< NSpaceDimension >::SubstrateType

Definition at line 107 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef ImagePixelType itk::bio::CellularAggregate< NSpaceDimension >::SubstrateValueType

Reimplemented from itk::bio::CellularAggregateBase.

Definition at line 109 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef CellularAggregateBase itk::bio::CellularAggregate< NSpaceDimension >::Superclass

Reimplemented from itk::bio::CellularAggregateBase.

Definition at line 46 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef BioCellType::VectorType itk::bio::CellularAggregate< NSpaceDimension >::VectorType

Definition at line 83 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef VoronoiRegionsContainer::ConstIterator itk::bio::CellularAggregate< NSpaceDimension >::VoronoiConstIterator

Definition at line 94 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef VoronoiRegionsContainer::Iterator itk::bio::CellularAggregate< NSpaceDimension >::VoronoiIterator

Definition at line 91 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef VoronoiRegionType::SelfAutoPointer itk::bio::CellularAggregate< NSpaceDimension >::VoronoiRegionAutoPointer

Definition at line 103 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef MeshType::CellsContainer itk::bio::CellularAggregate< NSpaceDimension >::VoronoiRegionsContainer

Definition at line 88 of file itkBioCellularAggregate.h.

template<unsigned int NSpaceDimension = 3>
typedef PolygonCell< CellInterfaceType > itk::bio::CellularAggregate< NSpaceDimension >::VoronoiRegionType

Definition at line 102 of file itkBioCellularAggregate.h.

Constructor & Destructor Documentation

template<unsigned int NSpaceDimension = 3>
itk::bio::CellularAggregate< NSpaceDimension >::CellularAggregate (  )  [protected]

template<unsigned int NSpaceDimension = 3>
virtual itk::bio::CellularAggregate< NSpaceDimension >::~CellularAggregate (  )  [protected, virtual]

template<unsigned int NSpaceDimension = 3>
itk::bio::CellularAggregate< NSpaceDimension >::CellularAggregate ( const Self &   )  [protected]

Member Function Documentation

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::Add ( CellBase *  cellA,
CellBase *  cellB,
double  perturbationLength 
) [virtual]

Reimplemented from itk::bio::CellularAggregateBase.

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::Add ( CellBase *  cell,
const VectorType &  perturbation 
) [virtual]

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::Add ( CellBase *  cell  )  [virtual]

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) const [inherited]

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) [inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::AddSubstrate ( SubstrateType *  substrate  )  [virtual]

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::AdvanceTimeStep ( void   )  [virtual]

static void itk::LightObject::BreakOnError (  )  [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::ClearForces ( void   )  [protected, virtual]

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::ComputeClosestPoints ( void   )  [protected, virtual]

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::ComputeForces ( void   )  [protected, virtual]

virtual LightObject::Pointer itk::Object::CreateAnother (  )  const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

virtual void itk::Object::DebugOff (  )  const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn (  )  const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete (  )  [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

template<unsigned int NSpaceDimension = 3>
void itk::bio::CellularAggregate< NSpaceDimension >::DumpContent ( std::ostream &  os  )  const

Command* itk::Object::GetCommand ( unsigned long  tag  )  [inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

bool itk::Object::GetDebug (  )  const [inherited]

Get the value of the debug flag.

template<unsigned int NSpaceDimension = 3>
static unsigned int itk::bio::CellularAggregate< NSpaceDimension >::GetDimension (  )  [inline, static]

Definition at line 115 of file itkBioCellularAggregate.h.

static bool itk::Object::GetGlobalWarningDisplay (  )  [static, inherited]

template<unsigned int NSpaceDimension = 3>
virtual const MeshType* itk::bio::CellularAggregate< NSpaceDimension >::GetMesh (  )  [virtual]

template<unsigned int NSpaceDimension = 3>
virtual MeshType* itk::bio::CellularAggregate< NSpaceDimension >::GetMesh (  )  [virtual]

const MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  const [inherited]

Returns:
A constant reference to this objects MetaDataDictionary.

MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  [inherited]

Returns:
A reference to this objects MetaDataDictionary.
Warning:
This reference may be changed.

virtual unsigned long itk::Object::GetMTime (  )  const [virtual, inherited]

Return this objects modified time.

Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.

Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().

template<unsigned int NSpaceDimension = 3>
virtual const char* itk::bio::CellularAggregate< NSpaceDimension >::GetNameOfClass (  )  const [virtual]

Standard part of all itk objects.

Reimplemented from itk::bio::CellularAggregateBase.

template<unsigned int NSpaceDimension = 3>
unsigned int itk::bio::CellularAggregate< NSpaceDimension >::GetNumberOfCells ( void   )  const

virtual int itk::LightObject::GetReferenceCount (  )  const [inline, virtual, inherited]

Gets the reference count on this object.

Definition at line 106 of file itkLightObject.h.

template<unsigned int NSpaceDimension = 3>
virtual SubstratesVector& itk::bio::CellularAggregate< NSpaceDimension >::GetSubstrates ( void   )  [virtual]

template<unsigned int NSpaceDimension = 3>
virtual SubstrateValueType itk::bio::CellularAggregate< NSpaceDimension >::GetSubstrateValue ( unsigned long int  cellId,
unsigned int  substrateId 
) const [virtual]

Reimplemented from itk::bio::CellularAggregateBase.

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::GetVoronoi ( unsigned long int  cellId,
VoronoiRegionAutoPointer &   
) const [virtual]

static void itk::Object::GlobalWarningDisplayOff (  )  [inline, static, inherited]

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

static void itk::Object::GlobalWarningDisplayOn (  )  [inline, static, inherited]

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

bool itk::Object::HasObserver ( const EventObject &  event  )  const [inherited]

Return true if an observer is registered for this event.

void itk::Object::InvokeEvent ( const EventObject &   )  const [inherited]

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

void itk::Object::InvokeEvent ( const EventObject &   )  [inherited]

Call Execute on all the Commands observing this event id.

template<unsigned int NSpaceDimension = 3>
itk::bio::CellularAggregate< NSpaceDimension >::itkStaticConstMacro ( SpaceDimension  ,
unsigned  int,
NSpaceDimension   
)

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::KillAll ( void   )  [virtual]

virtual void itk::Object::Modified (  )  const [virtual, inherited]

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, itk::RankImageFilter< TInputImage, TInputImage, itk::FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.

Referenced by itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().

template<unsigned int NSpaceDimension = 3>
static Pointer itk::bio::CellularAggregate< NSpaceDimension >::New (  )  [static]

Method for creation through the object factory.

Reimplemented from itk::bio::CellularAggregateBase.

template<unsigned int NSpaceDimension = 3>
void itk::bio::CellularAggregate< NSpaceDimension >::operator= ( const Self &   )  [protected]

void itk::LightObject::Print ( std::ostream &  os,
Indent  indent = 0 
) const [inherited]

Cause the object to print itself out.

Referenced by itk::WeakPointer< itk::ProcessObject >::Print().

virtual void itk::LightObject::PrintHeader ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

bool itk::Object::PrintObservers ( std::ostream &  os,
Indent  indent 
) const [protected, inherited]

template<unsigned int NSpaceDimension = 3>
void itk::bio::CellularAggregate< NSpaceDimension >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::bio::CellularAggregateBase.

virtual void itk::LightObject::PrintTrailer ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

virtual void itk::Object::Register (  )  const [virtual, inherited]

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::Remove ( CellBase *  cell  )  [virtual]

Reimplemented from itk::bio::CellularAggregateBase.

void itk::Object::RemoveAllObservers (  )  [inherited]

Remove all observers .

void itk::Object::RemoveObserver ( unsigned long  tag  )  [inherited]

Remove the observer with this tag value.

void itk::Object::SetDebug ( bool  debugFlag  )  const [inherited]

Set the value of the debug flag. A non-zero value turns debugging on.

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::SetEgg ( BioCellType *  cell,
const PointType &  position 
) [virtual]

static void itk::Object::SetGlobalWarningDisplay ( bool  flag  )  [static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<unsigned int NSpaceDimension = 3>
void itk::bio::CellularAggregate< NSpaceDimension >::SetGrowthRadiusIncrement ( double  value  ) 

template<unsigned int NSpaceDimension = 3>
void itk::bio::CellularAggregate< NSpaceDimension >::SetGrowthRadiusLimit ( double  value  ) 

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary &  rhs  )  [inherited]

Returns:
Set the MetaDataDictionary

virtual void itk::Object::SetReferenceCount ( int   )  [virtual, inherited]

Sets the reference count (use with care)

Reimplemented from itk::LightObject.

virtual void itk::Object::UnRegister (  )  const [virtual, inherited]

Decrease the reference count (release by another object).

Reimplemented from itk::LightObject.

template<unsigned int NSpaceDimension = 3>
virtual void itk::bio::CellularAggregate< NSpaceDimension >::UpdatePositions ( void   )  [protected, virtual]

Member Data Documentation

InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects.

Definition at line 144 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count

Definition at line 147 of file itkLightObject.h.

The documentation for this class was generated from the following file:
Generated at Thu Nov 6 13:17:09 2008 for ITK by doxygen 1.5.1 written by Dimitri van Heesch, © 1997-2000