itk::Statistics Namespace Reference

Classes

class BackPropagationLayer

class BatchSupervisedTrainingFunction

class ChiSquareDistribution

ChiSquareDistribution class defines the interface for a univariate Chi-Square distribution (pdfs, cdfs, etc.). More...

class CompletelyConnectedWeightSet

class CovarianceCalculator

Calculates the covariance matrix of the target sample data. More...

class CovarianceSampleFilter

Calculates the covariance matrix of the target sample data. More...

class DecisionRule

Base class that allows the setting of usage of different decision rules used in classification This class has the pure virtual function, Evaluate(). Therefore, any subclass should implement the function to be instantiated. More...

class DenseFrequencyContainer

his class is a container for frequencies of bins in an histogram. More...

class DenseFrequencyContainer2

his class is a container for frequencies of bins in an histogram. More...

class DensityFunction

DensityFunction class defines common interfaces for density functions. More...

class DistanceMetric

this class declares common interfaces for distance functions. More...

class DistanceToCentroidMembershipFunction

class represents DistanceToCentroid Density Function. More...

class ErrorBackPropagationLearningFunctionBase

class ErrorBackPropagationLearningWithMomentum

class ErrorFunctionBase

class EuclideanDistance

Euclidean distance function. More...

class EuclideanDistanceMetric

Euclidean distance function. More...

class EuclideanSquareDistanceMetric

Computes Euclidean distance between origin and given measurement vector. More...

class ExpectationMaximizationMixtureModelEstimator

This class generates the parameter estimates for a mixture model using expectation maximization strategy. More...

class GaussianDensityFunction

GaussianDensityFunction class represents Gaussian Density Function. More...

class GaussianDistribution

GaussianDistribution class defines the interface for a univariate Gaussian distribution (pdfs, cdfs, etc.). More...

class GaussianGoodnessOfFitComponent

is a GoodnessOfFitComponent for Gaussian distribution. More...

class GaussianMembershipFunction

GaussianMembershipFunction class represents Gaussian function. More...

class GaussianMixtureModelComponent

is a component (derived from MixtureModelComponentBase) for Gaussian class. This class is used in ExpectationMaximizationMixtureModelEstimator. More...

class GaussianRadialBasisFunction

class GaussianTransferFunction

struct GetAdaptorMeasurementVectorLength

struct GetHistogramDimension

class GoodnessOfFitComponentBase

provides component (module) type specific functionalities for GoodnessOfFitMixtureModelCostFunction. More...

class GoodnessOfFitFunctionBase

base class for classes calculates different types of goodness-of-fit statistics More...

class GoodnessOfFitMixtureModelCostFunction

calculates the goodness-of-fit statstics for multivarate mixture model More...

class GreyLevelCooccurrenceMatrixTextureCoefficientsCalculator

This class computes texture feature coefficients from a grey level co-occurrence matrix. More...

class HardLimitTransferFunction

class Histogram

This class stores measurement vectors in the context of n-dimensional histogram. More...

class HistogramToTextureFeaturesFilter

This class computes texture feature coefficients from a grey level co-occurrence matrix. More...

class HypersphereKernelMeanShiftModeSeeker

Evolves the mode using a hyperspherical kernel defined by a radius (which is set by SetRadius) method. More...

class IdentityTransferFunction

class ImageClassifierFilter

Image classification class. More...

class ImageJointDomainTraits

This class provides the type defintion for the measurement vector in the joint domain (range domain -- pixel values + spatial domain -- pixel's physical coordinates). More...

class ImageToCooccurrenceListAdaptor

Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram. More...

class ImageToHistogramFilter

This class generates an histogram from an image. More...

class ImageToHistogramGenerator

This class generates an histogram from an image. More...

class ImageToListAdaptor

This class provides ListSampleBase interfaces to ITK Image. More...

class ImageToListGenerator

The class takes an image as input and generates a list sample as output. More...

class ImageToListSampleAdaptor

This class provides ListSample interface to ITK Image. More...

class ImageToListSampleFilter

The class takes an image as input and generates a list sample as output. More...

class InputFunctionBase

class IterativeSupervisedTrainingFunction

class JointDomainImageToListAdaptor

This adaptor returns measurement vectors composed of an image pixel's range domain value (pixel value) and spatial domain value (pixel's physical coordiantes). More...

class JointDomainImageToListSampleAdaptor

This adaptor returns measurement vectors composed of an image pixel's range domain value (pixel value) and spatial domain value (pixel's physical coordiantes). More...

class KdTree

This class provides methods for k-nearest neighbor search and related data structures for a k-d tree. More...

class KdTreeBasedKmeansEstimator

fast k-means algorithm implementation using k-d tree structure More...

class KdTreeGenerator

This class generates a KdTree object without centroid information. More...

class KdTreeNode

This class defines the interface of its derived classes. More...

class KdTreeNonterminalNode

This is a subclass of the KdTreeNode. More...

class KdTreeTerminalNode

This class is the node that doesn't have any child node. The IsTerminal method returns true for this class. This class stores the instance identifiers belonging to this node, while the nonterminal nodes do not store them. The AddInstanceIdentifier and GetInstanceIdentifier are storing and retrieving the instance identifiers belonging to this node. More...

class KdTreeWeightedCentroidNonterminalNode

This is a subclass of the KdTreeNode. More...

class LayerBase

class LearningFunctionBase

class ListSample

This class is the native implementation of the ListSampleBase. More...

class ListSampleBase

This class is the base class for Samples that store measurements in a list. More...

class ListSampleToHistogramFilter

Imports data from ListSample object to Histogram object. More...

class ListSampleToHistogramGenerator

Generates a Histogram using the data from the ListSample object. More...

class LogLikelihoodGoodnessOfFitFunction

calculates loglikelihood ratio statistics More...

class LogSigmoidTransferFunction

class MahalanobisDistanceMembershipFunction

MahalanobisDistanceMembershipFunction class represents MahalanobisDistance Density Function. More...

class MahalanobisDistanceMetric

MahalanobisDistanceMetric class computes a Mahalanobis distance given a mean and covariance. More...

class ManhattanDistanceMetric

Euclidean distance function. More...

class MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator

This class computes a grey-level co-occurence matrix (histogram) from a given image and mask. GLCM's are used for image texture description. More...

class MaximumDecisionRule2

A Decision rule that choose the class of which discriminant score is the largest. This class will replace the MaximumDecisionRule in Code/Common. More...

class MaximumRatioDecisionRule2

This rule returns $i$ if $\frac{f_{i}(\overrightarrow{x})}{f_{j}(\overrightarrow{x})} > \frac{K_{j}}{K_{i}}$ for all $j \not= i$ , where the $i$ is the index of a class which has membership function $f_{i}$ and its prior value (usually, the a priori probability or the size of a class) is $K_{i}$ . More...

class MeanCalculator

calculates sample mean More...

class MeanSampleFilter

Given a sample, this filter computes the sample mean. More...

class MeanShiftModeCacheMethod

This class stores mappings between a query point and its resulting mode point. More...

class MeanShiftModeSeekerBase

Evolves the mode. This is the base class for any mean shift mode seeking algorithm classes. More...

class MeanSquaredErrorFunction

class MeasurementVectorPixelTraits

class itk::Statistics::MeasurementVectorPixelTraits< char >

class itk::Statistics::MeasurementVectorPixelTraits< double >

class itk::Statistics::MeasurementVectorPixelTraits< float >

class itk::Statistics::MeasurementVectorPixelTraits< signed char >

class itk::Statistics::MeasurementVectorPixelTraits< signed int >

class itk::Statistics::MeasurementVectorPixelTraits< signed long >

class itk::Statistics::MeasurementVectorPixelTraits< signed short >

class itk::Statistics::MeasurementVectorPixelTraits< unsigned char >

class itk::Statistics::MeasurementVectorPixelTraits< unsigned int >

class itk::Statistics::MeasurementVectorPixelTraits< unsigned long >

class itk::Statistics::MeasurementVectorPixelTraits< unsigned short >

class MeasurementVectorTraits

class MeasurementVectorTraitsTypes

class itk::Statistics::MeasurementVectorTraitsTypes< std::vector< T > >

class MembershipFunctionBase

MembershipFunctionBase class declares common interfaces for membership functions. More...

class MembershipSample

Container for storing the instance-identifiers of other sample with their associated class labels. More...

class MembershipSampleGenerator

MembershipSampleGenerator generates a MembershipSample object using a class mask sample. More...

class MersenneTwisterRandomVariateGenerator

MersenneTwisterRandom random variate generator. More...

class MinimumDecisionRule2

A Decision rule that choose the class of which discriminant score is the largest. This class will replace the MinimumDecisionRule in Code/Common. More...

class MixtureModelComponentBase

base class for distribution modules that supports analytical way to update the distribution parameters More...

class MultilayerNeuralNetworkBase

class MultiquadricRadialBasisFunction

class NeighborhoodSampler

generates a Subsample that is sampled from the input sample using a spherical kernel. More...

class NeuralNetworkObject

class NNetDistanceMetricBase

class NormalVariateGenerator

Normal random variate generator. More...

class OneHiddenLayerBackPropagationNeuralNetwork

class PointSetToListAdaptor

This class provides ListSampleBase interfaces to ITK PointSet. More...

class PointSetToListSampleAdaptor

This class provides ListSample interface to ITK PointSet. More...

class ProbabilityDistribution

ProbabilityDistribution class defines common interface for statistical distributions (pdfs, cdfs, etc.). More...

class ProductInputFunction

class QuickPropLearningRule

class RadialBasisFunctionBase

class RandomVariateGeneratorBase

this class defines common interfaces for random variate generators More...

class RBFBackPropagationLearningFunction

class RBFLayer

class RBFNetwork

class Sample

A collection of measurements for statistical analysis. More...

class SampleAlgorithmBase

This class is a base class for algorithms that operate on Sample data. The class is templated over the SampleType, which it takes as input using the SetInputSample() method. Derived classes that operate or calculate statistics on this input sample data and can access it using the GetInputSample() method. More...

class SampleClassifier

Integration point for MembershipCalculator, DecisionRule, and target sample data. More...

class SampleClassifierFilter

Sample classification class. More...

class SampleClassifierWithMask

Integration point for MembershipCalculator, DecisionRule, and target sample data. This class is functionally identical to the SampleClassifier, except that users can perform only part of the input sample that belongs to the subset of classes. More...

class SampleMeanShiftBlurringFilter

This filter blurs the input sample data using mean shift algorithm. More...

class SampleMeanShiftClusteringFilter

This filter create a cluster map from an input sample. More...

class SampleSelectiveMeanShiftBlurringFilter

This filter blurs the input sample data using mean shift algorithm selectively. More...

class SampleToHistogramFilter

Computes the Histogram corresponding to a Sample. More...

class SampleToHistogramProjectionFilter

projects measurement vectors on to an axis to generate an 1D histogram. More...

class SampleToSubsampleFilter

Base class of filters intended to select subsamples from samples. More...

class ScalarImageTextureCalculator

This class computes texture descriptions from an image. More...

class ScalarImageToCooccurrenceListSampleFilter

Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram. More...

class ScalarImageToCooccurrenceMatrixFilter

This class computes a co-occurence matrix (histogram) from a given image and a mask image if provided. Coocurrence matrces are used for image texture description. More...

class ScalarImageToGreyLevelCooccurrenceMatrixGenerator

This class computes a grey-level co-occurence matrix (histogram) from a given image. GLCM's are used for image texture description. More...

class ScalarImageToHistogramGenerator

TODO. More...

class ScalarImageToListAdaptor

This class provides ListSampleBase interfaces to ITK Image. More...

class ScalarImageToTextureFeaturesFilter

This class computes texture descriptions from an image. More...

class SelectiveSubsampleGenerator

SelectiveSubsampleGenerator generates a Subsample object that includes measurement vectors that belong to the classes that are specified by the SetSelectedClassLabels method. More...

class SigmoidTransferFunction

class SignedHardLimitTransferFunction

class SparseFrequencyContainer

his class is a container for an histogram. More...

class SparseFrequencyContainer2

his class is a container for an histogram. More...

class SquaredDifferenceErrorFunction

class StandardDeviationPerComponentSampleFilter

Calculates the covariance matrix of the target sample data. More...

class Subsample

This class stores a subset of instance identifiers from another sample object. You can create a subsample out of another sample object or another subsample object. The class is useful when storing or extracting a portion of a sample object. Note that when the elements of a subsample are sorted, the instance identifiers of the subsample are sorted without changing the original source sample. Most Statistics algorithms (that derive from StatisticsAlgorithmBase accept Subsample objects as inputs). More...

class SumInputFunction

class SymmetricSigmoidTransferFunction

class TanHTransferFunction

class TanSigmoidTransferFunction

class TDistribution

TDistribution class defines the interface for a univariate Student-t distribution (pdfs, cdfs, etc.). More...

class TrainingFunctionBase

class TransferFunctionBase

class TwoHiddenLayerBackPropagationNeuralNetwork

class VariableDimensionHistogram

This class is similar to the Histogram class. It however allows you to specify the histogram dimension at run time. (and is therefore not templated over the size of a measurement vector). Users who know that the length of a measurement vector will be fixed, for instance joint statistics on pixel values of 2 images, (where the dimension will be 2), etc should use the Histogram class instead. More...

class WeightedCentroidKdTreeGenerator

This class generates a KdTree object with centroid information. More...

class WeightedCovarianceCalculator

Calculates the covariance matrix of the target sample data where each measurement vector has an associated weight value. More...

class WeightedCovarianceSampleFilter

Calculates the covariance matrix of the target sample data. where each measurement vector has an associated weight value. More...

class WeightedMeanCalculator

calculates sample mean where each measurement vector has associated weight value More...

class WeightedMeanSampleFilter

Given a sample where each measurement vector has associated weight value, this filter computes the sample mean. More...

class WeightSetBase

Namespaces

namespace Algorithm

Enumerations

enum TextureFeatureName {
  Energy,
  Entropy,
  Correlation,
  InverseDifferenceMoment,
  Inertia,
  ClusterShade,
  ClusterProminence,
  HaralickCorrelation
}

Functions

template<class TSubsample>

void DownHeap (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int node)

template<class TSample>

void FindSampleBound (const TSample *sample, typename TSample::ConstIterator begin, typename TSample::ConstIterator end, typename TSample::MeasurementVectorType &min, typename TSample::MeasurementVectorType &max)

template<class TSubsample>

void FindSampleBoundAndMean (const TSubsample *sample, int beginIndex, int endIndex, typename TSubsample::MeasurementVectorType &min, typename TSubsample::MeasurementVectorType &max, typename TSubsample::MeasurementVectorType &mean)

template<class TSize>

TSize FloorLog (TSize size)

template<class TSubsample>

void HeapSort (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex)

template<class TSubsample>

void InsertSort (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex)

template<class TSubsample>

void IntrospectiveSort (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int sizeThreshold)

template<class TSubsample>

void IntrospectiveSortLoop (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int depthLimit, int sizeThreshold)

template<class TValue>

TValue MedianOfThree (const TValue a, const TValue b, const TValue c)

template<class TSubsample>

TSubsample::MeasurementType NthElement (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int nth)

template<class TSubsample>

int Partition (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, const typename TSubsample::MeasurementType partitionValue)

template<class TSubsample>

TSubsample::MeasurementType QuickSelect (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int kth)

template<class TSubsample>

TSubsample::MeasurementType QuickSelect (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int kth, typename TSubsample::MeasurementType medianGuess)

Enumeration Type Documentation

enum itk::Statistics::TextureFeatureName

Texture feature types

Enumerator:

Energy
Entropy
Correlation
InverseDifferenceMoment
Inertia
ClusterShade
ClusterProminence
HaralickCorrelation

Definition at line 98 of file itkGreyLevelCooccurrenceMatrixTextureCoefficientsCalculator.h.

Function Documentation

template<class TSubsample>

void itk::Statistics::DownHeap	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex,
		int	node
	)			`[inline]`

template<class TSample>

void itk::Statistics::FindSampleBound	(	const TSample *	sample,
		typename TSample::ConstIterator	begin,
		typename TSample::ConstIterator	end,
		typename TSample::MeasurementVectorType &	min,
		typename TSample::MeasurementVectorType &	max
	)			`[inline]`

template<class TSubsample>

void itk::Statistics::FindSampleBoundAndMean	(	const TSubsample *	sample,
		int	beginIndex,
		int	endIndex,
		typename TSubsample::MeasurementVectorType &	min,
		typename TSubsample::MeasurementVectorType &	max,
		typename TSubsample::MeasurementVectorType &	mean
	)			`[inline]`

template<class TSize>

TSize itk::Statistics::FloorLog ( TSize size ) [inline]

template<class TSubsample>

void itk::Statistics::HeapSort	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex
	)			`[inline]`

template<class TSubsample>

void itk::Statistics::InsertSort	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex
	)			`[inline]`

template<class TSubsample>

void itk::Statistics::IntrospectiveSort	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex,
		int	sizeThreshold
	)			`[inline]`

template<class TSubsample>

void itk::Statistics::IntrospectiveSortLoop	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex,
		int	depthLimit,
		int	sizeThreshold
	)			`[inline]`

template<class TValue>

TValue itk::Statistics::MedianOfThree	(	const TValue	a,
		const TValue	b,
		const TValue	c
	)			`[inline]`

template<class TSubsample>

TSubsample::MeasurementType itk::Statistics::NthElement	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex,
		int	nth
	)			`[inline]`

NthElement is an algorithm for finding the n-th largest element of a list. In this case, only of the components of the measurement vectors is considered. This component is defined by the argument activeDimension. The search is rectricted to the range between the index begin and end, also passed as arguments. This algorithm was based on the procedure used in the STL nth_element method.

template<class TSubsample>

int itk::Statistics::Partition	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex,
		const typename TSubsample::MeasurementType	partitionValue
	)			`[inline]`

The Partition algorithm performs partial sorting in a sample. Given a partitionValue, the algorithm moves to the beginning of the sample all MeasurementVectors whose component activeDimension is smaller than the partitionValue. In this way, the sample is partially sorted in two groups. First the group with activeDimension component smaller than the partitionValue, then the group of MeasurementVectors with activeDimension component larger than the partitionValue. The Partition algorithm takes as input a sample, and a range in that sample defined by [beginIndex,endIndex]. Only the activeDimension components of the MeasurementVectors in the sample will be considered by the algorithm. The Algorithm return an index in the range of [beginIndex,endIndex] pointing to the element with activeDimension component closest to the partitionValue.

template<class TSubsample>

TSubsample::MeasurementType itk::Statistics::QuickSelect	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex,
		int	kth
	)			`[inline]`

QuickSelect is an algorithm for finding the k-th largest element of a list. In this case, only of the components of the measurement vectors is considered. This component is defined by the argument activeDimension. The search is rectricted to the range between the index begin and end, also passed as arguments. http://en.wikipedia.org/wiki/Selection_algorithm.

template<class TSubsample>

TSubsample::MeasurementType itk::Statistics::QuickSelect	(	TSubsample *	sample,
		unsigned int	activeDimension,
		int	beginIndex,
		int	endIndex,
		int	kth,
		typename TSubsample::MeasurementType	medianGuess
	)			`[inline]`

QuickSelect is an algorithm for finding the k-th largest element of a list. In this case, only of the components of the measurement vectors is considered. This component is defined by the argument activeDimension. The search is rectricted to the range between the index begin and end, also passed as arguments. In this version, a guess value for the median index is provided in the argument medianGuess. The algoritm returns the value of the activeDimension component in the MeasurementVector located in the kth position. http://en.wikipedia.org/wiki/Selection_algorithm


Classes
class	BackPropagationLayer
class	BatchSupervisedTrainingFunction
class	ChiSquareDistribution
	ChiSquareDistribution class defines the interface for a univariate Chi-Square distribution (pdfs, cdfs, etc.). More...
class	CompletelyConnectedWeightSet
class	CovarianceCalculator
	Calculates the covariance matrix of the target sample data. More...
class	CovarianceSampleFilter
	Calculates the covariance matrix of the target sample data. More...
class	DecisionRule
	Base class that allows the setting of usage of different decision rules used in classification This class has the pure virtual function, Evaluate(). Therefore, any subclass should implement the function to be instantiated. More...
class	DenseFrequencyContainer
	his class is a container for frequencies of bins in an histogram. More...
class	DenseFrequencyContainer2
	his class is a container for frequencies of bins in an histogram. More...
class	DensityFunction
	DensityFunction class defines common interfaces for density functions. More...
class	DistanceMetric
	this class declares common interfaces for distance functions. More...
class	DistanceToCentroidMembershipFunction
	class represents DistanceToCentroid Density Function. More...
class	ErrorBackPropagationLearningFunctionBase
class	ErrorBackPropagationLearningWithMomentum
class	ErrorFunctionBase
class	EuclideanDistance
	Euclidean distance function. More...
class	EuclideanDistanceMetric
	Euclidean distance function. More...
class	EuclideanSquareDistanceMetric
	Computes Euclidean distance between origin and given measurement vector. More...
class	ExpectationMaximizationMixtureModelEstimator
	This class generates the parameter estimates for a mixture model using expectation maximization strategy. More...
class	GaussianDensityFunction
	GaussianDensityFunction class represents Gaussian Density Function. More...
class	GaussianDistribution
	GaussianDistribution class defines the interface for a univariate Gaussian distribution (pdfs, cdfs, etc.). More...
class	GaussianGoodnessOfFitComponent
	is a GoodnessOfFitComponent for Gaussian distribution. More...
class	GaussianMembershipFunction
	GaussianMembershipFunction class represents Gaussian function. More...
class	GaussianMixtureModelComponent
	is a component (derived from MixtureModelComponentBase) for Gaussian class. This class is used in ExpectationMaximizationMixtureModelEstimator. More...
class	GaussianRadialBasisFunction
class	GaussianTransferFunction
struct	GetAdaptorMeasurementVectorLength
struct	GetHistogramDimension
class	GoodnessOfFitComponentBase
	provides component (module) type specific functionalities for GoodnessOfFitMixtureModelCostFunction. More...
class	GoodnessOfFitFunctionBase
	base class for classes calculates different types of goodness-of-fit statistics More...
class	GoodnessOfFitMixtureModelCostFunction
	calculates the goodness-of-fit statstics for multivarate mixture model More...
class	GreyLevelCooccurrenceMatrixTextureCoefficientsCalculator
	This class computes texture feature coefficients from a grey level co-occurrence matrix. More...
class	HardLimitTransferFunction
class	Histogram
	This class stores measurement vectors in the context of n-dimensional histogram. More...
class	HistogramToTextureFeaturesFilter
	This class computes texture feature coefficients from a grey level co-occurrence matrix. More...
class	HypersphereKernelMeanShiftModeSeeker
	Evolves the mode using a hyperspherical kernel defined by a radius (which is set by SetRadius) method. More...
class	IdentityTransferFunction
class	ImageClassifierFilter
	Image classification class. More...
class	ImageJointDomainTraits
	This class provides the type defintion for the measurement vector in the joint domain (range domain -- pixel values + spatial domain -- pixel's physical coordinates). More...
class	ImageToCooccurrenceListAdaptor
	Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram. More...
class	ImageToHistogramFilter
	This class generates an histogram from an image. More...
class	ImageToHistogramGenerator
	This class generates an histogram from an image. More...
class	ImageToListAdaptor
	This class provides ListSampleBase interfaces to ITK Image. More...
class	ImageToListGenerator
	The class takes an image as input and generates a list sample as output. More...
class	ImageToListSampleAdaptor
	This class provides ListSample interface to ITK Image. More...
class	ImageToListSampleFilter
	The class takes an image as input and generates a list sample as output. More...
class	InputFunctionBase
class	IterativeSupervisedTrainingFunction
class	JointDomainImageToListAdaptor
	This adaptor returns measurement vectors composed of an image pixel's range domain value (pixel value) and spatial domain value (pixel's physical coordiantes). More...
class	JointDomainImageToListSampleAdaptor
	This adaptor returns measurement vectors composed of an image pixel's range domain value (pixel value) and spatial domain value (pixel's physical coordiantes). More...
class	KdTree
	This class provides methods for k-nearest neighbor search and related data structures for a k-d tree. More...
class	KdTreeBasedKmeansEstimator
	fast k-means algorithm implementation using k-d tree structure More...
class	KdTreeGenerator
	This class generates a KdTree object without centroid information. More...
class	KdTreeNode
	This class defines the interface of its derived classes. More...
class	KdTreeNonterminalNode
	This is a subclass of the KdTreeNode. More...
class	KdTreeTerminalNode
	This class is the node that doesn't have any child node. The IsTerminal method returns true for this class. This class stores the instance identifiers belonging to this node, while the nonterminal nodes do not store them. The AddInstanceIdentifier and GetInstanceIdentifier are storing and retrieving the instance identifiers belonging to this node. More...
class	KdTreeWeightedCentroidNonterminalNode
	This is a subclass of the KdTreeNode. More...
class	LayerBase
class	LearningFunctionBase
class	ListSample
	This class is the native implementation of the ListSampleBase. More...
class	ListSampleBase
	This class is the base class for Samples that store measurements in a list. More...
class	ListSampleToHistogramFilter
	Imports data from ListSample object to Histogram object. More...
class	ListSampleToHistogramGenerator
	Generates a Histogram using the data from the ListSample object. More...
class	LogLikelihoodGoodnessOfFitFunction
	calculates loglikelihood ratio statistics More...
class	LogSigmoidTransferFunction
class	MahalanobisDistanceMembershipFunction
	MahalanobisDistanceMembershipFunction class represents MahalanobisDistance Density Function. More...
class	MahalanobisDistanceMetric
	MahalanobisDistanceMetric class computes a Mahalanobis distance given a mean and covariance. More...
class	ManhattanDistanceMetric
	Euclidean distance function. More...
class	MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator
	This class computes a grey-level co-occurence matrix (histogram) from a given image and mask. GLCM's are used for image texture description. More...
class	MaximumDecisionRule2
	A Decision rule that choose the class of which discriminant score is the largest. This class will replace the MaximumDecisionRule in Code/Common. More...
class	MaximumRatioDecisionRule2
	This rule returns if $\frac{f_{i}(\overrightarrow{x})}{f_{j}(\overrightarrow{x})} > \frac{K_{j}}{K_{i}}$ for all $j \not= i$ , where the is the index of a class which has membership function $f_{i}$ and its prior value (usually, the a priori probability or the size of a class) is $K_{i}$ . More...
class	MeanCalculator
	calculates sample mean More...
class	MeanSampleFilter
	Given a sample, this filter computes the sample mean. More...
class	MeanShiftModeCacheMethod
	This class stores mappings between a query point and its resulting mode point. More...
class	MeanShiftModeSeekerBase
	Evolves the mode. This is the base class for any mean shift mode seeking algorithm classes. More...
class	MeanSquaredErrorFunction
class	MeasurementVectorPixelTraits
class	itk::Statistics::MeasurementVectorPixelTraits< char >
class	itk::Statistics::MeasurementVectorPixelTraits< double >
class	itk::Statistics::MeasurementVectorPixelTraits< float >
class	itk::Statistics::MeasurementVectorPixelTraits< signed char >
class	itk::Statistics::MeasurementVectorPixelTraits< signed int >
class	itk::Statistics::MeasurementVectorPixelTraits< signed long >
class	itk::Statistics::MeasurementVectorPixelTraits< signed short >
class	itk::Statistics::MeasurementVectorPixelTraits< unsigned char >
class	itk::Statistics::MeasurementVectorPixelTraits< unsigned int >
class	itk::Statistics::MeasurementVectorPixelTraits< unsigned long >
class	itk::Statistics::MeasurementVectorPixelTraits< unsigned short >
class	MeasurementVectorTraits
class	MeasurementVectorTraitsTypes
class	itk::Statistics::MeasurementVectorTraitsTypes< std::vector< T > >
class	MembershipFunctionBase
	MembershipFunctionBase class declares common interfaces for membership functions. More...
class	MembershipSample
	Container for storing the instance-identifiers of other sample with their associated class labels. More...
class	MembershipSampleGenerator
	MembershipSampleGenerator generates a MembershipSample object using a class mask sample. More...
class	MersenneTwisterRandomVariateGenerator
	MersenneTwisterRandom random variate generator. More...
class	MinimumDecisionRule2
	A Decision rule that choose the class of which discriminant score is the largest. This class will replace the MinimumDecisionRule in Code/Common. More...
class	MixtureModelComponentBase
	base class for distribution modules that supports analytical way to update the distribution parameters More...
class	MultilayerNeuralNetworkBase
class	MultiquadricRadialBasisFunction
class	NeighborhoodSampler
	generates a Subsample that is sampled from the input sample using a spherical kernel. More...
class	NeuralNetworkObject
class	NNetDistanceMetricBase
class	NormalVariateGenerator
	Normal random variate generator. More...
class	OneHiddenLayerBackPropagationNeuralNetwork
class	PointSetToListAdaptor
	This class provides ListSampleBase interfaces to ITK PointSet. More...
class	PointSetToListSampleAdaptor
	This class provides ListSample interface to ITK PointSet. More...
class	ProbabilityDistribution
	ProbabilityDistribution class defines common interface for statistical distributions (pdfs, cdfs, etc.). More...
class	ProductInputFunction
class	QuickPropLearningRule
class	RadialBasisFunctionBase
class	RandomVariateGeneratorBase
	this class defines common interfaces for random variate generators More...
class	RBFBackPropagationLearningFunction
class	RBFLayer
class	RBFNetwork
class	Sample
	A collection of measurements for statistical analysis. More...
class	SampleAlgorithmBase
	This class is a base class for algorithms that operate on Sample data. The class is templated over the SampleType, which it takes as input using the SetInputSample() method. Derived classes that operate or calculate statistics on this input sample data and can access it using the GetInputSample() method. More...
class	SampleClassifier
	Integration point for MembershipCalculator, DecisionRule, and target sample data. More...
class	SampleClassifierFilter
	Sample classification class. More...
class	SampleClassifierWithMask
	Integration point for MembershipCalculator, DecisionRule, and target sample data. This class is functionally identical to the SampleClassifier, except that users can perform only part of the input sample that belongs to the subset of classes. More...
class	SampleMeanShiftBlurringFilter
	This filter blurs the input sample data using mean shift algorithm. More...
class	SampleMeanShiftClusteringFilter
	This filter create a cluster map from an input sample. More...
class	SampleSelectiveMeanShiftBlurringFilter
	This filter blurs the input sample data using mean shift algorithm selectively. More...
class	SampleToHistogramFilter
	Computes the Histogram corresponding to a Sample. More...
class	SampleToHistogramProjectionFilter
	projects measurement vectors on to an axis to generate an 1D histogram. More...
class	SampleToSubsampleFilter
	Base class of filters intended to select subsamples from samples. More...
class	ScalarImageTextureCalculator
	This class computes texture descriptions from an image. More...
class	ScalarImageToCooccurrenceListSampleFilter
	Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram. More...
class	ScalarImageToCooccurrenceMatrixFilter
	This class computes a co-occurence matrix (histogram) from a given image and a mask image if provided. Coocurrence matrces are used for image texture description. More...
class	ScalarImageToGreyLevelCooccurrenceMatrixGenerator
	This class computes a grey-level co-occurence matrix (histogram) from a given image. GLCM's are used for image texture description. More...
class	ScalarImageToHistogramGenerator
	TODO. More...
class	ScalarImageToListAdaptor
	This class provides ListSampleBase interfaces to ITK Image. More...
class	ScalarImageToTextureFeaturesFilter
	This class computes texture descriptions from an image. More...
class	SelectiveSubsampleGenerator
	SelectiveSubsampleGenerator generates a Subsample object that includes measurement vectors that belong to the classes that are specified by the SetSelectedClassLabels method. More...
class	SigmoidTransferFunction
class	SignedHardLimitTransferFunction
class	SparseFrequencyContainer
	his class is a container for an histogram. More...
class	SparseFrequencyContainer2
	his class is a container for an histogram. More...
class	SquaredDifferenceErrorFunction
class	StandardDeviationPerComponentSampleFilter
	Calculates the covariance matrix of the target sample data. More...
class	Subsample
	This class stores a subset of instance identifiers from another sample object. You can create a subsample out of another sample object or another subsample object. The class is useful when storing or extracting a portion of a sample object. Note that when the elements of a subsample are sorted, the instance identifiers of the subsample are sorted without changing the original source sample. Most Statistics algorithms (that derive from StatisticsAlgorithmBase accept Subsample objects as inputs). More...
class	SumInputFunction
class	SymmetricSigmoidTransferFunction
class	TanHTransferFunction
class	TanSigmoidTransferFunction
class	TDistribution
	TDistribution class defines the interface for a univariate Student-t distribution (pdfs, cdfs, etc.). More...
class	TrainingFunctionBase
class	TransferFunctionBase
class	TwoHiddenLayerBackPropagationNeuralNetwork
class	VariableDimensionHistogram
	This class is similar to the Histogram class. It however allows you to specify the histogram dimension at run time. (and is therefore not templated over the size of a measurement vector). Users who know that the length of a measurement vector will be fixed, for instance joint statistics on pixel values of 2 images, (where the dimension will be 2), etc should use the Histogram class instead. More...
class	WeightedCentroidKdTreeGenerator
	This class generates a KdTree object with centroid information. More...
class	WeightedCovarianceCalculator
	Calculates the covariance matrix of the target sample data where each measurement vector has an associated weight value. More...
class	WeightedCovarianceSampleFilter
	Calculates the covariance matrix of the target sample data. where each measurement vector has an associated weight value. More...
class	WeightedMeanCalculator
	calculates sample mean where each measurement vector has associated weight value More...
class	WeightedMeanSampleFilter
	Given a sample where each measurement vector has associated weight value, this filter computes the sample mean. More...
class	WeightSetBase
Namespaces
namespace	Algorithm
Enumerations
enum	TextureFeatureName { Energy, Entropy, Correlation, InverseDifferenceMoment, Inertia, ClusterShade, ClusterProminence, HaralickCorrelation }
Functions
template<class TSubsample>
void	DownHeap (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int node)
template<class TSample>
void	FindSampleBound (const TSample *sample, typename TSample::ConstIterator begin, typename TSample::ConstIterator end, typename TSample::MeasurementVectorType &min, typename TSample::MeasurementVectorType &max)
template<class TSubsample>
void	FindSampleBoundAndMean (const TSubsample *sample, int beginIndex, int endIndex, typename TSubsample::MeasurementVectorType &min, typename TSubsample::MeasurementVectorType &max, typename TSubsample::MeasurementVectorType &mean)
template<class TSize>
TSize	FloorLog (TSize size)
template<class TSubsample>
void	HeapSort (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex)
template<class TSubsample>
void	InsertSort (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex)
template<class TSubsample>
void	IntrospectiveSort (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int sizeThreshold)
template<class TSubsample>
void	IntrospectiveSortLoop (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int depthLimit, int sizeThreshold)
template<class TValue>
TValue	MedianOfThree (const TValue a, const TValue b, const TValue c)
template<class TSubsample>
TSubsample::MeasurementType	NthElement (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int nth)
template<class TSubsample>
int	Partition (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, const typename TSubsample::MeasurementType partitionValue)
template<class TSubsample>
TSubsample::MeasurementType	QuickSelect (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int kth)
template<class TSubsample>
TSubsample::MeasurementType	QuickSelect (TSubsample *sample, unsigned int activeDimension, int beginIndex, int endIndex, int kth, typename TSubsample::MeasurementType medianGuess)