itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage > Class Template Reference
[Operators]

Decomposes an image into directions along basis components. More...

#include <itkImagePCADecompositionCalculator.h>

Inheritance diagram for itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >:

[legend]

Collaboration diagram for itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >:

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List of all members.

Public Types
typedef TBasisImage::ConstPointer	BasisImageConstPointer
typedef TBasisImage::Pointer	BasisImagePointer
typedef std::vector < BasisImagePointer >	BasisImagePointerVector
typedef TBasisImage	BasisImageType
typedef vnl_matrix < BasisPixelType >	BasisMatrixType
typedef TBasisImage::PixelType	BasisPixelType
typedef vnl_vector < BasisPixelType >	BasisVectorType
typedef SmartPointer< const Self >	ConstPointer
typedef TInputImage::ConstPointer	InputImageConstPointer
typedef TInputImage::Pointer	InputImagePointer
typedef TInputImage	InputImageType
typedef ImagePCAShapeModelEstimator < TInputImage, TBasisImage > ::Pointer	ModelPointerType
typedef SmartPointer< Self >	Pointer
typedef ImagePCADecompositionCalculator	Self
typedef Object	Superclass
Public Member Functions
void	Compute (void)
virtual LightObject::Pointer	CreateAnother () const
virtual void	DebugOff () const
virtual void	DebugOn () const
virtual void	Delete ()
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
const MetaDataDictionary &	GetMetaDataDictionary (void) const
MetaDataDictionary &	GetMetaDataDictionary (void)
virtual unsigned long	GetMTime () const
virtual const char *	GetNameOfClass () const
virtual BasisVectorType	GetProjection () const
virtual int	GetReferenceCount () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &) const
void	InvokeEvent (const EventObject &)
	itkStaticConstMacro (BasisImageDimension, unsigned int, TBasisImage::ImageDimension)
	itkStaticConstMacro (InputImageDimension, unsigned int, TInputImage::ImageDimension)
virtual void	Modified () const
void	Print (std::ostream &os, Indent indent=0) const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetBasisFromModel (ModelPointerType model)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
unsigned long	AddObserver (const EventObject &event, Command *) const
unsigned long	AddObserver (const EventObject &event, Command *)
BasisImagePointerVector	GetBasisImages ()
void	SetBasisImages (const BasisImagePointerVector &)
virtual const InputImageType *	GetImage ()
virtual void	SetImage (const InputImageType *_arg)
virtual const BasisImageType *	GetMeanImage ()
virtual void	SetMeanImage (const BasisImageType *_arg)
Static Public Member Functions
static void	BreakOnError ()
static Pointer	New ()
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static void	SetGlobalWarningDisplay (bool flag)
Protected Types
typedef int	InternalReferenceCountType
Protected Member Functions
void	CalculateBasisMatrix (void)
void	CalculateRecenteredImageAsVector (void)
	ImagePCADecompositionCalculator ()
bool	PrintObservers (std::ostream &os, Indent indent) const
void	PrintSelf (std::ostream &os, Indent indent) const
virtual	~ImagePCADecompositionCalculator ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
Protected Attributes
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock

---

Detailed Description

template<class TInputImage, class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>
class itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >

Decomposes an image into directions along basis components.

This calculator computes the projection of an image into a subspace specified by some basis set of images, and, optionally, a mean image (e.g a translation to a new origin). Typically, this basis/mean image will be the mean and principal components of an image data set, as calculated by an ImagePCAShapeModelEstimator. The output of the calculator is a vnl_vector containing the coefficients along each dimension of the provided basis set. To use this calculator, set the basis images with the SetBasisImage method, and optionally set the mean image with the SetMeanImage method. In the PCA case, the zeroth output of the ImagePCAShapeModelEstimator is the mean image and subsequent outputs are the basis images. SetBasisFromModel is a convenience method to set all of this information from a given ImagePCAShapeModelEstimator instance.

This class is templated over the input image type and the type of images used to describe the basis.

Warning:

This method assumes that the input image consists of scalar pixel types.

All images (input, basis, and mean) must be the same size.

Author:

Zachary Pincus

Definition at line 60 of file itkImagePCADecompositionCalculator.h.

---

Member Typedef Documentation

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef TBasisImage::ConstPointer itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::BasisImageConstPointer

Definition at line 85 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef TBasisImage::Pointer itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::BasisImagePointer

Definition at line 81 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef std::vector< BasisImagePointer > itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::BasisImagePointerVector

Vector of basis image pointers.

Definition at line 100 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef TBasisImage itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::BasisImageType

Definition at line 77 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef vnl_matrix<BasisPixelType> itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::BasisMatrixType

Type definitions for internal vectors and matrices

Definition at line 103 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef TBasisImage::PixelType itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::BasisPixelType

Basis image pixel type: this is also the type of the optput vector

Definition at line 88 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef vnl_vector<BasisPixelType> itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::BasisVectorType

Definition at line 104 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef SmartPointer<const Self> itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::ConstPointer

Reimplemented from itk::Object.

Definition at line 67 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef TInputImage::ConstPointer itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::InputImageConstPointer

Const Pointer type for the image.

Definition at line 84 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef TInputImage::Pointer itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::InputImagePointer

Pointer types for the image.

Definition at line 80 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef TInputImage itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::InputImageType

Type definitions for the input images.

Definition at line 73 of file itkImagePCADecompositionCalculator.h.

typedef int itk::LightObject::InternalReferenceCountType [protected, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 139 of file itkLightObject.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef ImagePCAShapeModelEstimator<TInputImage, TBasisImage>::Pointer itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::ModelPointerType

Type definition of a compatible ImagePCAShapeModelEstimator

Definition at line 123 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef SmartPointer<Self> itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::Pointer

Reimplemented from itk::Object.

Definition at line 66 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef ImagePCADecompositionCalculator itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::Self

Standard class typedefs.

Reimplemented from itk::Object.

Definition at line 64 of file itkImagePCADecompositionCalculator.h.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

typedef Object itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::Superclass

Reimplemented from itk::Object.

Definition at line 65 of file itkImagePCADecompositionCalculator.h.

---

Constructor & Destructor Documentation

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::ImagePCADecompositionCalculator

(

)

[protected]

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

virtual itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::~ImagePCADecompositionCalculator

(

)

[inline, protected, virtual]

Definition at line 137 of file itkImagePCADecompositionCalculator.h.

---

Member Function Documentation

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *
	)			const [inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *
	)			[inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

static void itk::LightObject::BreakOnError

(

)

[static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

void itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::CalculateBasisMatrix

(

void

)

[protected]

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

void itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::CalculateRecenteredImageAsVector

(

void

)

[protected]

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

void itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::Compute

(

void

)

Compute the PCA decomposition of the input image.

virtual LightObject::Pointer itk::Object::CreateAnother

(

)

const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

virtual void itk::Object::DebugOff

(

)

const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn

(

)

const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete

(

)

[virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

BasisImagePointerVector itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::GetBasisImages

(

)

[inline]

Set and get the basis images.

Definition at line 118 of file itkImagePCADecompositionCalculator.h.

Command* itk::Object::GetCommand

(

unsigned long

tag

)

[inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

bool itk::Object::GetDebug

(

)

const [inherited]

Get the value of the debug flag.

static bool itk::Object::GetGlobalWarningDisplay

(

)

[static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

virtual const InputImageType* itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::GetImage

(

)

[virtual]

Set and get the input image.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

virtual const BasisImageType* itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::GetMeanImage

(

)

[virtual]

Set and get the mean image.

const MetaDataDictionary& itk::Object::GetMetaDataDictionary

(

void

)

const [inherited]

Returns:

A constant reference to this objects MetaDataDictionary.

MetaDataDictionary& itk::Object::GetMetaDataDictionary

(

void

)

[inherited]

Returns:

A reference to this objects MetaDataDictionary.

Warning:

This reference may be changed.

virtual unsigned long itk::Object::GetMTime

(

)

const [virtual, inherited]

Return this objects modified time.

Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, PixelAccessor >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.

Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

virtual const char* itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::GetNameOfClass

(

)

const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::Object.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

virtual BasisVectorType itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::GetProjection

(

)

const [virtual]

Return the projection of the image.

virtual int itk::LightObject::GetReferenceCount

(

)

const [inline, virtual, inherited]

Gets the reference count on this object.

Definition at line 106 of file itkLightObject.h.

static void itk::Object::GlobalWarningDisplayOff

(

)

[inline, static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

static void itk::Object::GlobalWarningDisplayOn

(

)

[inline, static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

bool itk::Object::HasObserver

(

const EventObject &

event

)

const [inherited]

Return true if an observer is registered for this event.

void itk::Object::InvokeEvent

(

const EventObject &

)

const [inherited]

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

void itk::Object::InvokeEvent

(

const EventObject &

)

[inherited]

Call Execute on all the Commands observing this event id.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::itkStaticConstMacro	(	BasisImageDimension	,
		unsigned	int,
		TBasisImage::ImageDimension
	)

Basis Image dimension

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::itkStaticConstMacro	(	InputImageDimension	,
		unsigned	int,
		TInputImage::ImageDimension
	)

Input Image dimension

virtual void itk::Object::Modified

(

)

const [virtual, inherited]

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, PixelAccessor >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, RankImageFilter< TInputImage, TInputImage, FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.

Referenced by itk::NarrowBandImageFilterBase< TInputImage, TOutputImage >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, TOutputImage >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, TOutputImage >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, TOutputImage >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

static Pointer itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::New

(

)

[static]

Method for creation through the object factory.

Reimplemented from itk::Object.

void itk::LightObject::Print	(	std::ostream &	os,
		Indent	indent = 0
	)			const [inherited]

Cause the object to print itself out.

Referenced by itk::WeakPointer< ProcessObject >::Print().

virtual void itk::LightObject::PrintHeader	(	std::ostream &	os,
		Indent	indent
	)			const [protected, virtual, inherited]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

bool itk::Object::PrintObservers	(	std::ostream &	os,
		Indent	indent
	)			const [protected, inherited]

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

void itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)			const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Object.

virtual void itk::LightObject::PrintTrailer	(	std::ostream &	os,
		Indent	indent
	)			const [protected, virtual, inherited]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

virtual void itk::Object::Register

(

)

const [virtual, inherited]

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

void itk::Object::RemoveAllObservers

(

)

[inherited]

Remove all observers .

void itk::Object::RemoveObserver

(

unsigned long

tag

)

[inherited]

Remove the observer with this tag value.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

void itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::SetBasisFromModel

(

ModelPointerType

model

)

Set the basis images from a ImagePCAShapeModelEstimator

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

void itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::SetBasisImages

(

const BasisImagePointerVector &

)

Set and get the basis images.

void itk::Object::SetDebug

(

bool

debugFlag

)

const [inherited]

Set the value of the debug flag. A non-zero value turns debugging on.

static void itk::Object::SetGlobalWarningDisplay

(

bool

flag

)

[static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

virtual void itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::SetImage

(

const InputImageType *

_arg

)

[virtual]

Set and get the input image.

template<class TInputImage , class TBasisImage = Image<double, ::itk::GetImageDimension<TInputImage>::ImageDimension>>

virtual void itk::ImagePCADecompositionCalculator< TInputImage, TBasisImage >::SetMeanImage

(

const BasisImageType *

_arg

)

[virtual]

Set and get the mean image.

void itk::Object::SetMetaDataDictionary

(

const MetaDataDictionary &

rhs

)

[inherited]

Returns:

Set the MetaDataDictionary

virtual void itk::Object::SetReferenceCount

(

int

)

[virtual, inherited]

Sets the reference count (use with care)

Reimplemented from itk::LightObject.

virtual void itk::Object::UnRegister

(

)

const [virtual, inherited]

Decrease the reference count (release by another object).

Reimplemented from itk::LightObject.

---

Member Data Documentation

InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects.

Definition at line 144 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count

Definition at line 147 of file itkLightObject.h.

---

The documentation for this class was generated from the following file:

• itkImagePCADecompositionCalculator.h