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itk::MeanReciprocalSquareDifferencePointSetToImageMetric

itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage > Class Template Reference
[Similarity Metrics of Registration Methods]

Computes similarity between pixel values of a point set and intensity values in an image. More...

#include <itkMeanReciprocalSquareDifferencePointSetToImageMetric.h>

Inheritance diagram for itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >:
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Collaboration diagram for itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >:
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List of all members.

Public Types

typedef SmartPointer< const Self > ConstPointer
typedef
Superclass::ParametersValueType 		CoordinateRepresentationType
typedef Superclass::DerivativeType DerivativeType
typedef
Superclass::FixedPointSetConstPointer 		FixedPointSetConstPointer
typedef
Superclass::FixedPointSetType 		FixedPointSetType
typedef
Superclass::GradientPixelType 		GradientPixelType
typedef Superclass::InputPointType InputPointType
typedef InterpolatorType::Pointer InterpolatorPointer
typedef
InterpolateImageFunction
< MovingImageType,
CoordinateRepresentationType > 		InterpolatorType
typedef Superclass::MeasureType MeasureType
typedef
Superclass::MovingImageConstPointer 		MovingImageConstPointer
typedef TMovingImage::PixelType MovingImagePixelType
typedef Superclass::MovingImageType MovingImageType
typedef Superclass::OutputPointType OutputPointType
typedef Superclass::ParametersType ParametersType
typedef double ParametersValueType
typedef
Superclass::PointDataIterator 		PointDataIterator
typedef SmartPointer< Self > Pointer
typedef Superclass::PointIterator PointIterator
typedef Superclass::RealType RealType
typedef
MeanReciprocalSquareDifferencePointSetToImageMetric 		Self
typedef PointSetToImageMetric
< TFixedPointSet, TMovingImage > 		Superclass
typedef
Superclass::TransformJacobianType 		TransformJacobianType
typedef
Superclass::TransformParametersType 		TransformParametersType
typedef
Superclass::TransformPointer 		TransformPointer
typedef Superclass::TransformType TransformType

Public Member Functions

virtual LightObject::Pointer CreateAnother () const
virtual void DebugOff () const
virtual void DebugOn () const
virtual void Delete ()
Command * GetCommand (unsigned long tag)
bool GetDebug () const
virtual void GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const =0
void GetDerivative (const TransformParametersType &parameters, DerivativeType &Derivative) const
virtual const FixedPointSetType * GetFixedPointSet ()
virtual const GradientImageType * GetGradientImage ()
virtual InterpolatorType * GetInterpolator ()
const MetaDataDictionary & GetMetaDataDictionary (void) const
MetaDataDictionary & GetMetaDataDictionary (void)
virtual const MovingImageType * GetMovingImage ()
virtual unsigned long GetMTime () const
virtual const char * GetNameOfClass () const
unsigned int GetNumberOfParameters (void) const
virtual const unsigned long & GetNumberOfPixelsCounted ()
virtual int GetReferenceCount () const
virtual TransformType * GetTransform ()
virtual MeasureType GetValue (const ParametersType &parameters) const =0
MeasureType GetValue (const TransformParametersType &parameters) const
void GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const
bool HasObserver (const EventObject &event) const
virtual void Initialize (void) throw ( ExceptionObject )
void InvokeEvent (const EventObject &) const
void InvokeEvent (const EventObject &)
virtual void Modified () const
void Print (std::ostream &os, Indent indent=0) const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
virtual void SetFixedPointSet (const FixedPointSetType *_arg)
virtual void SetInterpolator (InterpolatorType *_arg)
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetMovingImage (const MovingImageType *_arg)
virtual void SetReferenceCount (int)
virtual void SetTransform (TransformType *_arg)
void SetTransformParameters (const ParametersType &parameters) const
virtual void UnRegister () const



virtual double GetLambda () const
virtual void SetLambda (double _arg)



virtual void GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Static Public Member Functions

static void BreakOnError ()
static Pointer New ()

Protected Member Functions

 MeanReciprocalSquareDifferencePointSetToImageMetric ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void PrintSelf (std::ostream &os, Indent indent) const
virtual ~MeanReciprocalSquareDifferencePointSetToImageMetric ()

Protected Attributes

bool m_ComputeGradient
FixedPointSetConstPointer m_FixedPointSet
GradientImagePointer m_GradientImage
InterpolatorPointer m_Interpolator
MovingImageConstPointer m_MovingImage
unsigned long m_NumberOfPixelsCounted
InternalReferenceCountType m_ReferenceCount
SimpleFastMutexLock m_ReferenceCountLock
TransformPointer m_Transform



typedef
GradientImageFilterType::Pointer 		GradientImageFilterPointer
typedef
GradientRecursiveGaussianImageFilter
< MovingImageType,
GradientImageType > 		GradientImageFilterType
typedef SmartPointer
< GradientImageType > 		GradientImagePointer
typedef Image
< GradientPixelType,
itkGetStaticConstMacro(MovingImageDimension)> 		GradientImageType
virtual const bool & GetComputeGradient ()
virtual void SetComputeGradient (bool _arg)
static const unsigned int FixedPointSetDimension = TFixedPointSet::PointDimension
static const unsigned int MovingImageDimension = TMovingImage::ImageDimension



static bool GetGlobalWarningDisplay ()
static void GlobalWarningDisplayOff ()
static void GlobalWarningDisplayOn ()
static void SetGlobalWarningDisplay (bool flag)
unsigned long AddObserver (const EventObject &event, Command *) const
unsigned long AddObserver (const EventObject &event, Command *)



virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
typedef int InternalReferenceCountType

Detailed Description

template<class TFixedPointSet, class TMovingImage>
class itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >

Computes similarity between pixel values of a point set and intensity values in an image.

This metric computes the average squared difference between pixels in the point set and transformed point set pixels in the moving image after passing the difference through a function of type $ \frac{1}{1+ \frac{ difference^2 }{ \lambda^2 } }$. $$ controls the capture radius of the metric. The term capture radius used here is in terms of intensity domain and not in the spatial domain.

Spatial correspondance between both images is established through a Transform.

Definition at line 46 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

Member Typedef Documentation

template<class TFixedPointSet , class TMovingImage >
typedef SmartPointer<const Self> itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::ConstPointer

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 55 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::ParametersValueType itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::CoordinateRepresentationType [inherited]

Type used for representing point components

Definition at line 57 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::DerivativeType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::DerivativeType

Type of the derivative.

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 75 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::FixedPointSetConstPointer itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::FixedPointSetConstPointer

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 78 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::FixedPointSetType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::FixedPointSetType

Type of the fixed Image.

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 76 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef GradientImageFilterType::Pointer itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GradientImageFilterPointer [inherited]

Set/Get the flag for computing the image gradient. When ON the metric derivative is computed using the Jacobian of the transformation and the image gradient. When OFF the metric derivative is computed by finite differences. Mode ON results in higher speed at the price of large memory footprint. Mode OFF results in small memory footprint at the price of large computation time

Definition at line 108 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef GradientRecursiveGaussianImageFilter< MovingImageType, GradientImageType > itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GradientImageFilterType [inherited]

Set/Get the flag for computing the image gradient. When ON the metric derivative is computed using the Jacobian of the transformation and the image gradient. When OFF the metric derivative is computed by finite differences. Mode ON results in higher speed at the price of large memory footprint. Mode OFF results in small memory footprint at the price of large computation time

Definition at line 107 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef SmartPointer<GradientImageType> itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GradientImagePointer [inherited]

Set/Get the flag for computing the image gradient. When ON the metric derivative is computed using the Jacobian of the transformation and the image gradient. When OFF the metric derivative is computed by finite differences. Mode ON results in higher speed at the price of large memory footprint. Mode OFF results in small memory footprint at the price of large computation time

Definition at line 104 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Image<GradientPixelType, itkGetStaticConstMacro(MovingImageDimension)> itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GradientImageType [inherited]

Set/Get the flag for computing the image gradient. When ON the metric derivative is computed using the Jacobian of the transformation and the image gradient. When OFF the metric derivative is computed by finite differences. Mode ON results in higher speed at the price of large memory footprint. Mode OFF results in small memory footprint at the price of large computation time

Definition at line 103 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::GradientPixelType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::GradientPixelType

Set/Get the flag for computing the image gradient. When ON the metric derivative is computed using the Jacobian of the transformation and the image gradient. When OFF the metric derivative is computed by finite differences. Mode ON results in higher speed at the price of large memory footprint. Mode OFF results in small memory footprint at the price of large computation time

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 72 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::InputPointType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::InputPointType

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 70 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

typedef int itk::LightObject::InternalReferenceCountType [protected, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 139 of file itkLightObject.h.

template<class TFixedPointSet , class TMovingImage >
typedef InterpolatorType::Pointer itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::InterpolatorPointer [inherited]

Definition at line 112 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef InterpolateImageFunction< MovingImageType, CoordinateRepresentationType > itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::InterpolatorType [inherited]

Type of the Interpolator Base class

Definition at line 95 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::MeasureType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::MeasureType

Type of the measure.

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 74 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::MovingImageConstPointer itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::MovingImageConstPointer

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 79 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef TMovingImage::PixelType itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::MovingImagePixelType [inherited]

Definition at line 64 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::MovingImageType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::MovingImageType

Type of the moving Image.

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 77 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::OutputPointType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::OutputPointType

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 71 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::ParametersType itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::ParametersType [inherited]

Type of the parameters.

Reimplemented from itk::SingleValuedCostFunction.

Definition at line 121 of file itkPointSetToImageMetric.h.

typedef double itk::CostFunction::ParametersValueType [inherited]

ParametersType typedef. It defines a position in the optimization search space.

Definition at line 46 of file itkCostFunction.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::PointDataIterator itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::PointDataIterator

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 82 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef SmartPointer<Self> itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::Pointer

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 54 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::PointIterator itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::PointIterator

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 81 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::RealType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::RealType

Types transferred from the base class

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 61 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef MeanReciprocalSquareDifferencePointSetToImageMetric itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::Self

Standard class typedefs.

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 52 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef PointSetToImageMetric<TFixedPointSet, TMovingImage > itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::Superclass

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 53 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::TransformJacobianType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::TransformJacobianType

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 69 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::TransformParametersType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::TransformParametersType

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 68 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::TransformPointer itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::TransformPointer

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 67 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
typedef Superclass::TransformType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::TransformType

Type of the Transform Base class

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

Definition at line 66 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

Constructor & Destructor Documentation

template<class TFixedPointSet , class TMovingImage >
itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::MeanReciprocalSquareDifferencePointSetToImageMetric (  )  [protected]
template<class TFixedPointSet , class TMovingImage >
virtual itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::~MeanReciprocalSquareDifferencePointSetToImageMetric (  )  [inline, protected, virtual]

Definition at line 104 of file itkMeanReciprocalSquareDifferencePointSetToImageMetric.h.

Member Function Documentation

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) const [inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) [inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

static void itk::LightObject::BreakOnError (  )  [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

virtual LightObject::Pointer itk::Object::CreateAnother (  )  const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, itk::CreateObjectFunction< T >, itk::TransformFactoryBase, itk::AnalyzeImageIOFactory, itk::BioRadImageIOFactory, itk::BMPImageIOFactory, itk::Brains2MaskImageIOFactory, itk::DICOMImageIO2Factory, itk::DicomImageIOFactory, itk::GDCMImageIOFactory, itk::GE4ImageIOFactory, itk::GE5ImageIOFactory, itk::GEAdwImageIOFactory, itk::GiplImageIOFactory, itk::JPEGImageIOFactory, itk::LSMImageIOFactory, itk::MetaImageIOFactory, itk::NiftiImageIOFactory, itk::NrrdImageIOFactory, itk::PNGImageIOFactory, itk::RawImageIOFactory< TPixel, VImageDimension >, itk::SiemensVisionImageIOFactory, itk::StimulateImageIOFactory, itk::TIFFImageIOFactory, itk::VTKImageIOFactory, itk::Bruker2DSEQImageIOFactory, itk::MatlabTransformIOFactory, itk::MINC2ImageIOFactory, itk::PhilipsRECImageIOFactory, itk::TxtTransformIOFactory, itk::VoxBoCUBImageIOFactory, and itk::SpatialObjectFactoryBase.

virtual void itk::Object::DebugOff (  )  const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn (  )  const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete (  )  [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

Command* itk::Object::GetCommand ( unsigned long  tag  )  [inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

template<class TFixedPointSet , class TMovingImage >
virtual const bool& itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GetComputeGradient (  )  [virtual, inherited]

Set/Get the flag for computing the image gradient. When ON the metric derivative is computed using the Jacobian of the transformation and the image gradient. When OFF the metric derivative is computed by finite differences. Mode ON results in higher speed at the price of large memory footprint. Mode OFF results in small memory footprint at the price of large computation time

bool itk::Object::GetDebug (  )  const [inherited]

Get the value of the debug flag.

virtual void itk::SingleValuedCostFunction::GetDerivative ( const ParametersType &  parameters,
DerivativeType &  derivative 
) const [pure virtual, inherited]

This method returns the derivative of the cost function corresponding to the specified parameters.

Implemented in itk::Statistics::GoodnessOfFitMixtureModelCostFunction< TInputSample >.

template<class TFixedPointSet , class TMovingImage >
void itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::GetDerivative ( const TransformParametersType &  parameters,
DerivativeType &  Derivative 
) const

Get the derivatives of the match measure.

template<class TFixedPointSet , class TMovingImage >
virtual const FixedPointSetType* itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GetFixedPointSet (  )  [virtual, inherited]

Get the Fixed Image.

static bool itk::Object::GetGlobalWarningDisplay (  )  [static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

template<class TFixedPointSet , class TMovingImage >
virtual const GradientImageType* itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GetGradientImage (  )  [virtual, inherited]

Get Gradient Image.

template<class TFixedPointSet , class TMovingImage >
virtual InterpolatorType* itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GetInterpolator (  )  [virtual, inherited]

Get a pointer to the Interpolator.

template<class TFixedPointSet , class TMovingImage >
virtual double itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::GetLambda (  )  const [virtual]

Set/Get the lambda distance. (controls the capture radius of the metric).

const MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  const [inherited]
Returns:
A constant reference to this objects MetaDataDictionary.
MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  [inherited]
Returns:
A reference to this objects MetaDataDictionary.
Warning:
This reference may be changed.
template<class TFixedPointSet , class TMovingImage >
virtual const MovingImageType* itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GetMovingImage (  )  [virtual, inherited]

Get the Moving Image.

virtual unsigned long itk::Object::GetMTime (  )  const [virtual, inherited]

Return this objects modified time.

Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, PixelAccessor >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.

Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().

template<class TFixedPointSet , class TMovingImage >
virtual const char* itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::GetNameOfClass (  )  const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

template<class TFixedPointSet , class TMovingImage >
unsigned int itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GetNumberOfParameters ( void   )  const [inline, virtual, inherited]

Return the number of parameters required by the Transform

Implements itk::CostFunction.

Definition at line 168 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
virtual const unsigned long& itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GetNumberOfPixelsCounted (  )  [virtual, inherited]

Get the number of pixels considered in the computation.

virtual int itk::LightObject::GetReferenceCount (  )  const [inline, virtual, inherited]

Gets the reference count on this object.

Definition at line 106 of file itkLightObject.h.

template<class TFixedPointSet , class TMovingImage >
virtual TransformType* itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::GetTransform (  )  [virtual, inherited]

Get a pointer to the Transform.

virtual MeasureType itk::SingleValuedCostFunction::GetValue ( const ParametersType &  parameters  )  const [pure virtual, inherited]

This method returns the value of the cost function corresponding to the specified parameters.

Implemented in itk::Statistics::GoodnessOfFitMixtureModelCostFunction< TInputSample >.

template<class TFixedPointSet , class TMovingImage >
MeasureType itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::GetValue ( const TransformParametersType &  parameters  )  const

Get the value for single valued optimizers.

virtual void itk::SingleValuedCostFunction::GetValueAndDerivative ( const ParametersType &  parameters,
MeasureType &  value,
DerivativeType &  derivative 
) const [inline, virtual, inherited]

This method returns the value and derivative of the cost function corresponding to the specified parameters

Definition at line 71 of file itkSingleValuedCostFunction.h.

template<class TFixedPointSet , class TMovingImage >
void itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::GetValueAndDerivative ( const TransformParametersType &  parameters,
MeasureType &  Value,
DerivativeType &  Derivative 
) const

Get value and derivatives for multiple valued optimizers.

static void itk::Object::GlobalWarningDisplayOff (  )  [inline, static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

static void itk::Object::GlobalWarningDisplayOn (  )  [inline, static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

bool itk::Object::HasObserver ( const EventObject &  event  )  const [inherited]

Return true if an observer is registered for this event.

template<class TFixedPointSet , class TMovingImage >
virtual void itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::Initialize ( void   )  throw ( ExceptionObject ) [virtual, inherited]

Initialize the Metric by making sure that all the components are present and plugged together correctly

void itk::Object::InvokeEvent ( const EventObject &   )  const [inherited]

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

void itk::Object::InvokeEvent ( const EventObject &   )  [inherited]

Call Execute on all the Commands observing this event id.

virtual void itk::Object::Modified (  )  const [virtual, inherited]

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, PixelAccessor >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, RankImageFilter< TInputImage, TInputImage, FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.

Referenced by itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().

template<class TFixedPointSet , class TMovingImage >
static Pointer itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::New (  )  [static]

Method for creation through the object factory.

Reimplemented from itk::Object.

void itk::LightObject::Print ( std::ostream &  os,
Indent  indent = 0 
) const [inherited]

Cause the object to print itself out.

Referenced by itk::WeakPointer< ProcessObject >::Print().

virtual void itk::LightObject::PrintHeader ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

bool itk::Object::PrintObservers ( std::ostream &  os,
Indent  indent 
) const [protected, inherited]
template<class TFixedPointSet , class TMovingImage >
virtual void itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >.

virtual void itk::LightObject::PrintTrailer ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

virtual void itk::Object::Register (  )  const [virtual, inherited]

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

void itk::Object::RemoveAllObservers (  )  [inherited]

Remove all observers .

void itk::Object::RemoveObserver ( unsigned long  tag  )  [inherited]

Remove the observer with this tag value.

template<class TFixedPointSet , class TMovingImage >
virtual void itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::SetComputeGradient ( bool  _arg  )  [virtual, inherited]

Set/Get the flag for computing the image gradient. When ON the metric derivative is computed using the Jacobian of the transformation and the image gradient. When OFF the metric derivative is computed by finite differences. Mode ON results in higher speed at the price of large memory footprint. Mode OFF results in small memory footprint at the price of large computation time

void itk::Object::SetDebug ( bool  debugFlag  )  const [inherited]

Set the value of the debug flag. A non-zero value turns debugging on.

template<class TFixedPointSet , class TMovingImage >
virtual void itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::SetFixedPointSet ( const FixedPointSetType *  _arg  )  [virtual, inherited]

Connect the Fixed Image.

static void itk::Object::SetGlobalWarningDisplay ( bool  flag  )  [static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<class TFixedPointSet , class TMovingImage >
virtual void itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::SetInterpolator ( InterpolatorType *  _arg  )  [virtual, inherited]

Connect the Interpolator.

template<class TFixedPointSet , class TMovingImage >
virtual void itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >::SetLambda ( double  _arg  )  [virtual]

Set/Get the lambda distance. (controls the capture radius of the metric).

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary &  rhs  )  [inherited]
Returns:
Set the MetaDataDictionary
template<class TFixedPointSet , class TMovingImage >
virtual void itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::SetMovingImage ( const MovingImageType *  _arg  )  [virtual, inherited]

Connect the Moving Image.

virtual void itk::Object::SetReferenceCount ( int   )  [virtual, inherited]

Sets the reference count (use with care)

Reimplemented from itk::LightObject.

template<class TFixedPointSet , class TMovingImage >
virtual void itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::SetTransform ( TransformType *  _arg  )  [virtual, inherited]

Connect the Transform.

template<class TFixedPointSet , class TMovingImage >
void itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::SetTransformParameters ( const ParametersType &  parameters  )  const [inherited]

Set the parameters defining the Transform.

virtual void itk::Object::UnRegister (  )  const [virtual, inherited]

Decrease the reference count (release by another object).

Reimplemented from itk::LightObject.

Member Data Documentation

template<class TFixedPointSet , class TMovingImage >
const unsigned int itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::FixedPointSetDimension = TFixedPointSet::PointDimension [static, inherited]

Set/Get the flag for computing the image gradient. When ON the metric derivative is computed using the Jacobian of the transformation and the image gradient. When OFF the metric derivative is computed by finite differences. Mode ON results in higher speed at the price of large memory footprint. Mode OFF results in small memory footprint at the price of large computation time

Definition at line 75 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
bool itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::m_ComputeGradient [protected, inherited]

Definition at line 188 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
FixedPointSetConstPointer itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::m_FixedPointSet [protected, inherited]

Definition at line 182 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
GradientImagePointer itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::m_GradientImage [protected, inherited]

Definition at line 189 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
InterpolatorPointer itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::m_Interpolator [protected, inherited]

Definition at line 186 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
MovingImageConstPointer itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::m_MovingImage [protected, inherited]

Definition at line 183 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
unsigned long itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::m_NumberOfPixelsCounted [mutable, protected, inherited]

Definition at line 180 of file itkPointSetToImageMetric.h.

InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects.

Definition at line 144 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count

Definition at line 147 of file itkLightObject.h.

template<class TFixedPointSet , class TMovingImage >
TransformPointer itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::m_Transform [mutable, protected, inherited]

Definition at line 185 of file itkPointSetToImageMetric.h.

template<class TFixedPointSet , class TMovingImage >
const unsigned int itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >::MovingImageDimension = TMovingImage::ImageDimension [static, inherited]

Constants for the image dimensions

Definition at line 73 of file itkPointSetToImageMetric.h.

The documentation for this class was generated from the following file:
Generated at Fri Apr 16 23:10:55 2010 for ITK by doxygen 1.6.1 written by Dimitri van Heesch, © 1997-2000