Base class for ActiveShapeModelCalculator object. More...
#include <itkActiveShapeModelCalculator.h>
Detailed Description
template<class TImage>
class itk::ActiveShapeModelCalculator< TImage >
Base class for ActiveShapeModelCalculator object.
itkActiveShapeModelCalculator performs a principal component analysis (PCA) on a set of binary tranining images. The input is a binary volume that contains the shapes. The number of largest principal components which explain 98% of shape variance is automatically computed. The ITK pipeline mechanism sets up the storage for input images. The outputs are the mean shape, eigenvectors and eigenvalues. The user specifies the tolerance value (in pixel unit) for automatic landmark identification. The algorithm uses the VNL library to perform the eigen analysis.
The Update() function enables the calculation of the various models, creates the membership function objects and populates them.
- REFERENCES
- [1] Cootes T., Taylor C., et. al, Active Shape Models - Their training and application, Comput. Vis. Image Understanding, vol. 61, pp. 38-59, 1995.
[2] D. H. Douglas and T. K. Peucker, Algorithms for the reduction of the number of points required to represent a digitized line or its caricature, Canadian Cartographer 10(2), pp. 112--122, 1973.
Definition at line 77 of file itkActiveShapeModelCalculator.h.
Member Typedef Documentation
| typedef BinaryThresholdImageFilter<Image3DType, Image3DType > itk::ActiveShapeModelCalculator< TImage >::BinaryFilterType |
Definition at line 149 of file itkActiveShapeModelCalculator.h.
| typedef BinaryThresholdImageFilter<Image2DType, Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::BinaryFilterType1 |
Definition at line 150 of file itkActiveShapeModelCalculator.h.
| typedef BinaryThresholdImageFilter<Image3DType, Image3D8bitsType > itk::ActiveShapeModelCalculator< TImage >::BinaryFilterType2 |
Definition at line 151 of file itkActiveShapeModelCalculator.h.
| typedef ImageRegionConstIterator< Image3D8bitsType > itk::ActiveShapeModelCalculator< TImage >::ConstIteratorType |
Definition at line 142 of file itkActiveShapeModelCalculator.h.
| typedef SmartPointer<const Self> itk::ActiveShapeModelCalculator< TImage >::ConstPointer |
Reimplemented from itk::Object.
Definition at line 84 of file itkActiveShapeModelCalculator.h.
| typedef DanielssonDistanceMapImageFilter< Image3DType, Image3DType > itk::ActiveShapeModelCalculator< TImage >::DistanceMapFilterType |
Definition at line 152 of file itkActiveShapeModelCalculator.h.
| typedef GradientMagnitudeImageFilter< Image3DType, Image3DType > itk::ActiveShapeModelCalculator< TImage >::GradientFilterType |
Standard filter type within this class.
Definition at line 148 of file itkActiveShapeModelCalculator.h.
| typedef Image< Pixel8bitsType, 2 > itk::ActiveShapeModelCalculator< TImage >::Image2D8bitsType |
Definition at line 116 of file itkActiveShapeModelCalculator.h.
| typedef Image2DType::Pointer itk::ActiveShapeModelCalculator< TImage >::Image2DPointer |
Standard image type pointer within this class.
Definition at line 124 of file itkActiveShapeModelCalculator.h.
| typedef Image< PixelType, 2 > itk::ActiveShapeModelCalculator< TImage >::Image2DType |
Definition at line 115 of file itkActiveShapeModelCalculator.h.
| typedef Image< Pixel8bitsType, 3 > itk::ActiveShapeModelCalculator< TImage >::Image3D8bitsType |
Definition at line 117 of file itkActiveShapeModelCalculator.h.
| typedef Image3DType::ConstPointer itk::ActiveShapeModelCalculator< TImage >::Image3DConstPointer |
Definition at line 125 of file itkActiveShapeModelCalculator.h.
| typedef TImage itk::ActiveShapeModelCalculator< TImage >::Image3DType |
Standard image type within this class.
Definition at line 114 of file itkActiveShapeModelCalculator.h.
| typedef Image3DType::IndexType itk::ActiveShapeModelCalculator< TImage >::Index3DType |
Definition at line 121 of file itkActiveShapeModelCalculator.h.
| typedef Image2D8bitsType::IndexType itk::ActiveShapeModelCalculator< TImage >::IndexType |
Standard index type within this class.
Definition at line 120 of file itkActiveShapeModelCalculator.h.
typedef int itk::LightObject::InternalReferenceCountType [protected, inherited] |
Define the type of the reference count according to the target. This allows the use of atomic operations
Definition at line 139 of file itkLightObject.h.
| typedef ImageRegionIterator< Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::IteratorType |
Definition at line 143 of file itkActiveShapeModelCalculator.h.
| typedef ImageLinearIteratorWithIndex< Image2DType > itk::ActiveShapeModelCalculator< TImage >::LinearIteratorType |
Standard iterator type within this class.
Definition at line 140 of file itkActiveShapeModelCalculator.h.
| typedef std::list<IndexType> itk::ActiveShapeModelCalculator< TImage >::List2DType |
Standard list type within this class.
Definition at line 136 of file itkActiveShapeModelCalculator.h.
| typedef vnl_matrix<double> itk::ActiveShapeModelCalculator< TImage >::MatrixOfDoubleType |
Standard matrix type within this class.
Definition at line 110 of file itkActiveShapeModelCalculator.h.
| typedef vnl_matrix<int> itk::ActiveShapeModelCalculator< TImage >::MatrixOfIntegerType |
Definition at line 111 of file itkActiveShapeModelCalculator.h.
| typedef Vector< unsigned int, 2 > itk::ActiveShapeModelCalculator< TImage >::MeasurementVectorType |
Definition at line 103 of file itkActiveShapeModelCalculator.h.
| typedef NeighborhoodIterator< Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::NeighborIteratorType |
Definition at line 144 of file itkActiveShapeModelCalculator.h.
| typedef unsigned char itk::ActiveShapeModelCalculator< TImage >::Pixel8bitsType |
Definition at line 98 of file itkActiveShapeModelCalculator.h.
| typedef float itk::ActiveShapeModelCalculator< TImage >::PixelType |
Extract the dimension of the image. itkStaticConstMacro(ImageDimension, unsigned int, TImage::ImageDimension); Standard pixel type within this class.
Definition at line 90 of file itkActiveShapeModelCalculator.h.
| typedef PointSetType::PointDataContainer itk::ActiveShapeModelCalculator< TImage >::PointDataContainer |
Definition at line 133 of file itkActiveShapeModelCalculator.h.
| typedef SmartPointer<Self> itk::ActiveShapeModelCalculator< TImage >::Pointer |
Reimplemented from itk::Object.
Definition at line 83 of file itkActiveShapeModelCalculator.h.
| typedef PointSetType::PointsContainer itk::ActiveShapeModelCalculator< TImage >::PointsContainer |
Standard container type within this class.
Definition at line 132 of file itkActiveShapeModelCalculator.h.
| typedef PointSet< unsigned short, 2 > itk::ActiveShapeModelCalculator< TImage >::PointSetType |
Standard PointSet type within this class.
Definition at line 128 of file itkActiveShapeModelCalculator.h.
| typedef PointsContainer::Iterator itk::ActiveShapeModelCalculator< TImage >::PointsIterator |
Definition at line 145 of file itkActiveShapeModelCalculator.h.
| typedef PointSetType::PointType itk::ActiveShapeModelCalculator< TImage >::PointType |
Definition at line 129 of file itkActiveShapeModelCalculator.h.
| typedef BinaryPruningImageFilter< Image2D8bitsType, Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::PruneFilterType |
Definition at line 154 of file itkActiveShapeModelCalculator.h.
| typedef Statistics::ListSample< MeasurementVectorType > itk::ActiveShapeModelCalculator< TImage >::SampleType |
Definition at line 137 of file itkActiveShapeModelCalculator.h.
| typedef ActiveShapeModelCalculator<TImage> itk::ActiveShapeModelCalculator< TImage >::Self |
Standard class typedefs.
Reimplemented from itk::Object.
Definition at line 81 of file itkActiveShapeModelCalculator.h.
| typedef ImageSliceConstIteratorWithIndex< Image3DType > itk::ActiveShapeModelCalculator< TImage >::SliceIteratorType |
Definition at line 141 of file itkActiveShapeModelCalculator.h.
| typedef Object itk::ActiveShapeModelCalculator< TImage >::Superclass |
Reimplemented from itk::Object.
Definition at line 82 of file itkActiveShapeModelCalculator.h.
| typedef BinaryThinningImageFilter< Image2D8bitsType, Image2D8bitsType > itk::ActiveShapeModelCalculator< TImage >::ThinFilterType |
Definition at line 153 of file itkActiveShapeModelCalculator.h.
| typedef Vector< double, 2 > itk::ActiveShapeModelCalculator< TImage >::Vector2DType |
Standard vector type within this class.
Definition at line 101 of file itkActiveShapeModelCalculator.h.
| typedef Vector< double, 3 > itk::ActiveShapeModelCalculator< TImage >::Vector3DType |
Definition at line 102 of file itkActiveShapeModelCalculator.h.
| typedef vnl_vector<double> itk::ActiveShapeModelCalculator< TImage >::VectorOfDoubleType |
Definition at line 105 of file itkActiveShapeModelCalculator.h.
| typedef std::vector< unsigned int> itk::ActiveShapeModelCalculator< TImage >::VectorType |
Definition at line 104 of file itkActiveShapeModelCalculator.h.
Constructor & Destructor Documentation
| itk::ActiveShapeModelCalculator< TImage >::ActiveShapeModelCalculator | ( | ) | [inline, protected] |
Definition at line 231 of file itkActiveShapeModelCalculator.h.
| itk::ActiveShapeModelCalculator< TImage >::~ActiveShapeModelCalculator | ( | ) | [inline, protected] |
Definition at line 246 of file itkActiveShapeModelCalculator.h.
Member Function Documentation
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | const [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| static void itk::LightObject::BreakOnError | ( | ) | [static, inherited] |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
| virtual LightObject::Pointer itk::Object::CreateAnother | ( | ) | const [virtual, inherited] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, itk::CreateObjectFunction< T >, itk::TransformFactoryBase, itk::AnalyzeImageIOFactory, itk::BioRadImageIOFactory, itk::BMPImageIOFactory, itk::Brains2MaskImageIOFactory, itk::DICOMImageIO2Factory, itk::DicomImageIOFactory, itk::GDCMImageIOFactory, itk::GE4ImageIOFactory, itk::GE5ImageIOFactory, itk::GEAdwImageIOFactory, itk::GiplImageIOFactory, itk::JPEGImageIOFactory, itk::LSMImageIOFactory, itk::MetaImageIOFactory, itk::NiftiImageIOFactory, itk::NrrdImageIOFactory, itk::PNGImageIOFactory, itk::RawImageIOFactory< TPixel, VImageDimension >, itk::SiemensVisionImageIOFactory, itk::StimulateImageIOFactory, itk::TIFFImageIOFactory, itk::VTKImageIOFactory, itk::Bruker2DSEQImageIOFactory, itk::MatlabTransformIOFactory, itk::MINC2ImageIOFactory, itk::MRCImageIOFactory, itk::PhilipsRECImageIOFactory, itk::TxtTransformIOFactory, itk::VoxBoCUBImageIOFactory, itk::VTKImageIO2Factory, and itk::SpatialObjectFactoryBase.
| virtual void itk::Object::DebugOff | ( | ) | const [virtual, inherited] |
Turn debugging output off.
| virtual void itk::Object::DebugOn | ( | ) | const [virtual, inherited] |
Turn debugging output on.
| virtual void itk::LightObject::Delete | ( | ) | [virtual, inherited] |
Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
| void itk::ActiveShapeModelCalculator< TImage >::GenerateData | ( | ) |
Compute mean, eigenvectors and eigenvalues of a new or modified training set. This method computes the mean, eigenvectors and eigenvalues of the training set given as a parameter and stores them in the object. The values of these parameters can then be retrieved by using other methods of this object.
| Command* itk::Object::GetCommand | ( | unsigned long | tag | ) | [inherited] |
Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
| bool itk::Object::GetDebug | ( | ) | const [inherited] |
Get the value of the debug flag.
| VectorOfDoubleType itk::ActiveShapeModelCalculator< TImage >::GetEigenvalues | ( | ) |
Return the largest t eigenvalues [1 x t]
| MatrixOfDoubleType itk::ActiveShapeModelCalculator< TImage >::GetEigenvector | ( | ) |
Return the matrix where each column corresponds to a eigenvector [2n x t]
| static bool itk::Object::GetGlobalWarningDisplay | ( | ) | [static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
| const double& itk::ActiveShapeModelCalculator< TImage >::GetLowerThresholdGradient | ( | ) | const [inline] |
Set/Get the lower threshold for the binary filter applied on the gradient images. Changing this value from the default is not recommended or necessary but could be used to get thinner contours at the risk of creating an unstable solution.
Definition at line 173 of file itkActiveShapeModelCalculator.h.
| VectorOfDoubleType itk::ActiveShapeModelCalculator< TImage >::GetMeanShape | ( | ) |
Return the mean Shape of the model (x1 y1 x2 y2 ... xn yn), where n = n. of landmarks
| MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | [inherited] |
- Returns:
- A reference to this objects MetaDataDictionary.
- Warning:
- This reference may be changed.
| const MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | const [inherited] |
- Returns:
- A constant reference to this objects MetaDataDictionary.
| virtual unsigned long itk::Object::GetMTime | ( | ) | const [virtual, inherited] |
Return this objects modified time.
Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.
Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().
| virtual const char* itk::ActiveShapeModelCalculator< TImage >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::Object.
| const unsigned int& itk::ActiveShapeModelCalculator< TImage >::GetNumberOfTrainingImages | ( | ) | const [inline] |
Get the number of training images.
Definition at line 210 of file itkActiveShapeModelCalculator.h.
| const unsigned int& itk::ActiveShapeModelCalculator< TImage >::GetPruneIteration | ( | ) | const [inline] |
Set/Get the number of iteration for Pruning filter
Definition at line 205 of file itkActiveShapeModelCalculator.h.
| virtual int itk::LightObject::GetReferenceCount | ( | ) | const [inline, virtual, inherited] |
Gets the reference count on this object.
Definition at line 106 of file itkLightObject.h.
| const double& itk::ActiveShapeModelCalculator< TImage >::GetTolerance | ( | ) | const [inline] |
Set/Get the tolerance threshold (in pixels unit) for the automatic landmarks.
Definition at line 198 of file itkActiveShapeModelCalculator.h.
| const double& itk::ActiveShapeModelCalculator< TImage >::GetUpperThresholdDistance | ( | ) | const [inline] |
Set/Get the distance threshold for the binary filter applied on the distance images Changing this value from the default is not recommended or necessary but could be used to get thicker contours at the risk of creating an unstable solution.
Definition at line 191 of file itkActiveShapeModelCalculator.h.
| const double& itk::ActiveShapeModelCalculator< TImage >::GetUpperThresholdMeanDistance | ( | ) | const [inline] |
Set/Get the distance threshold for the binary filter applied on the mean of the distance images. Changing this value from the default is not recommended or necessary but could be used to get thicker contours at the risk of creating an unstable solution.
Definition at line 182 of file itkActiveShapeModelCalculator.h.
| static void itk::Object::GlobalWarningDisplayOff | ( | ) | [inline, static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Definition at line 100 of file itkObject.h.
References itk::Object::SetGlobalWarningDisplay().
| static void itk::Object::GlobalWarningDisplayOn | ( | ) | [inline, static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Definition at line 98 of file itkObject.h.
References itk::Object::SetGlobalWarningDisplay().
| bool itk::Object::HasObserver | ( | const EventObject & | event | ) | const [inherited] |
Return true if an observer is registered for this event.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | [inherited] |
Call Execute on all the Commands observing this event id.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | const [inherited] |
Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.
| virtual void itk::Object::Modified | ( | ) | const [virtual, inherited] |
Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.
Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, RankImageFilter< TInputImage, TInputImage, FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.
Referenced by itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().
| static Pointer itk::ActiveShapeModelCalculator< TImage >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::Object.
| void itk::LightObject::Print | ( | std::ostream & | os, | |
| Indent | indent = 0 | |||
| ) | const [inherited] |
Cause the object to print itself out.
Referenced by itk::WeakPointer< ProcessObject >::Print().
| virtual void itk::LightObject::PrintHeader | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| bool itk::Object::PrintObservers | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, inherited] |
| void itk::ActiveShapeModelCalculator< TImage >::PrintSelf | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [inline, protected, virtual] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::Object.
Definition at line 248 of file itkActiveShapeModelCalculator.h.
References itkDebugMacro, and HardConnectedComponentImageFilter::PrintSelf().
| virtual void itk::LightObject::PrintTrailer | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| virtual void itk::Object::Register | ( | ) | const [virtual, inherited] |
Increase the reference count (mark as used by another object).
Reimplemented from itk::LightObject.
| void itk::Object::RemoveAllObservers | ( | ) | [inherited] |
Remove all observers .
| void itk::Object::RemoveObserver | ( | unsigned long | tag | ) | [inherited] |
Remove the observer with this tag value.
| void itk::Object::SetDebug | ( | bool | debugFlag | ) | const [inherited] |
Set the value of the debug flag. A non-zero value turns debugging on.
| static void itk::Object::SetGlobalWarningDisplay | ( | bool | flag | ) | [static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().
| virtual void itk::ActiveShapeModelCalculator< TImage >::SetImage | ( | const Image3DType * | image | ) | [inline, virtual] |
Set the input binary image (values in {0,255}) .
Definition at line 157 of file itkActiveShapeModelCalculator.h.
| void itk::ActiveShapeModelCalculator< TImage >::SetLowerThresholdGradient | ( | const double & | lt | ) | [inline] |
Set/Get the lower threshold for the binary filter applied on the gradient images. Changing this value from the default is not recommended or necessary but could be used to get thinner contours at the risk of creating an unstable solution.
Definition at line 171 of file itkActiveShapeModelCalculator.h.
| void itk::Object::SetMetaDataDictionary | ( | const MetaDataDictionary & | rhs | ) | [inherited] |
- Returns:
- Set the MetaDataDictionary
| void itk::ActiveShapeModelCalculator< TImage >::SetPruneIteration | ( | const unsigned int & | t | ) | [inline] |
Set/Get the number of iteration for Pruning filter
Definition at line 203 of file itkActiveShapeModelCalculator.h.
| virtual void itk::Object::SetReferenceCount | ( | int | ) | [virtual, inherited] |
Sets the reference count (use with care)
Reimplemented from itk::LightObject.
| void itk::ActiveShapeModelCalculator< TImage >::SetTolerance | ( | const double & | t | ) | [inline] |
Set/Get the tolerance threshold (in pixels unit) for the automatic landmarks.
Definition at line 196 of file itkActiveShapeModelCalculator.h.
| void itk::ActiveShapeModelCalculator< TImage >::SetUpperThresholdDistance | ( | const double & | ut2 | ) | [inline] |
Set/Get the distance threshold for the binary filter applied on the distance images Changing this value from the default is not recommended or necessary but could be used to get thicker contours at the risk of creating an unstable solution.
Definition at line 189 of file itkActiveShapeModelCalculator.h.
| void itk::ActiveShapeModelCalculator< TImage >::SetUpperThresholdMeanDistance | ( | const double & | ut1 | ) | [inline] |
Set/Get the distance threshold for the binary filter applied on the mean of the distance images. Changing this value from the default is not recommended or necessary but could be used to get thicker contours at the risk of creating an unstable solution.
Definition at line 180 of file itkActiveShapeModelCalculator.h.
| virtual void itk::Object::UnRegister | ( | ) | const [virtual, inherited] |
Decrease the reference count (release by another object).
Reimplemented from itk::LightObject.
Member Data Documentation
InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited] |
Number of uses of this object by other objects.
Definition at line 144 of file itkLightObject.h.
SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited] |
Mutex lock to protect modification to the reference count
Definition at line 147 of file itkLightObject.h.
The documentation for this class was generated from the following file:
