Framework for performing multi-resolution PDE deformable registration. More...
#include <itkMultiResolutionPDEDeformableRegistration.h>
Detailed Description
template<class TFixedImage, class TMovingImage, class TDeformationField, class TRealType = float>
class itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >
Framework for performing multi-resolution PDE deformable registration.
MultiResolutionPDEDeformableRegistration provides a generic framework to peform multi-resolution deformable registration.
At each resolution level a PDEDeformableRegistrationFilter is used to register two images by computing the deformation field which will map a moving image onto a fixed image.
A deformation field is represented as an image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.
The internal PDEDeformationRegistrationFilter can be set using SetRegistrationFilter. By default a DemonsRegistrationFilter is used.
The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial deformation field maybe set via SetInitialDeformationField if is matches the characteristics of the coarsest pyramid level. If no such assumption can be made (e.g. the deformation field has the same characteristics as the input images), an initial deformation field can still be set via SetArbitraryInitialDeformationField or SetInput. The filter will then take care of mathching the coarsest level characteristics. If no initial field is set a zero field is used as the initial condition.
MultiResolutionPyramidImageFilters are used to downsample the fixed and moving images. A VectorExpandImageFilter is used to upsample the deformation as we move from a coarse to fine solution.
This class is templated over the fixed image type, the moving image type, and the Deformation Field type.
- Warning:
- This class assumes that the fixed, moving and deformation field image types all have the same number of dimensions.
- See also:
- PDEDeformableRegistrationFilter
- DemonsRegistrationFilter
- MultiResolutionPyramidImageFilter
- VectorExpandImageFilter
The current implementation of this class does not support streaming.
Definition at line 82 of file itkMultiResolutionPDEDeformableRegistration.h.
Member Typedef Documentation
| typedef SmartPointer<const Self> itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::ConstPointer |
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 92 of file itkMultiResolutionPDEDeformableRegistration.h.
typedef DataObject::Pointer itk::ImageSource< TDeformationField >::DataObjectPointer [inherited] |
Smart Pointer type to a DataObject.
Reimplemented from itk::ProcessObject.
Definition at line 62 of file itkImageSource.h.
typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray [inherited] |
STL Array of SmartPointers to DataObjects
Definition at line 103 of file itkProcessObject.h.
typedef DataObjectPointerArray::size_type itk::ProcessObject::DataObjectPointerArraySizeType [inherited] |
Size type of an std::vector
Definition at line 112 of file itkProcessObject.h.
| typedef DemonsRegistrationFilter< FloatImageType, FloatImageType, DeformationFieldType > itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::DefaultRegistrationType |
The default registration type.
Definition at line 129 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef DeformationFieldType::Pointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::DeformationFieldPointer |
Definition at line 113 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef TDeformationField itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::DeformationFieldType |
Deformation field image type.
Definition at line 112 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef FieldExpanderType::Pointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::FieldExpanderPointer |
Definition at line 144 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef VectorResampleImageFilter<DeformationFieldType, DeformationFieldType > itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::FieldExpanderType |
The deformation field expander type.
Definition at line 143 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef FixedImageType::ConstPointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::FixedImageConstPointer |
Definition at line 104 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef FixedImageType::Pointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::FixedImagePointer |
Definition at line 103 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef FixedImagePyramidType::Pointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::FixedImagePyramidPointer |
Definition at line 134 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef MultiResolutionPyramidImageFilter<FixedImageType, FloatImageType > itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::FixedImagePyramidType |
The fixed multi-resolution image pyramid type.
Definition at line 133 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef TFixedImage itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::FixedImageType |
Fixed image type.
Definition at line 99 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef Image<TRealType,itkGetStaticConstMacro(ImageDimension)> itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::FloatImageType |
Internal float image type.
Definition at line 120 of file itkMultiResolutionPDEDeformableRegistration.h.
typedef InputImageType::ConstPointer itk::ImageToImageFilter< TDeformationField , TDeformationField >::InputImageConstPointer [inherited] |
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 84 of file itkImageToImageFilter.h.
typedef InputImageType::PixelType itk::ImageToImageFilter< TDeformationField , TDeformationField >::InputImagePixelType [inherited] |
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 86 of file itkImageToImageFilter.h.
typedef InputImageType::Pointer itk::ImageToImageFilter< TDeformationField , TDeformationField >::InputImagePointer [inherited] |
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 83 of file itkImageToImageFilter.h.
typedef InputImageType::RegionType itk::ImageToImageFilter< TDeformationField , TDeformationField >::InputImageRegionType [inherited] |
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 85 of file itkImageToImageFilter.h.
typedef TDeformationField itk::ImageToImageFilter< TDeformationField , TDeformationField >::InputImageType [inherited] |
Some convenient typedefs.
Reimplemented in itk::DenseFiniteDifferenceImageFilter< TDeformationField, TDeformationField >, itk::FiniteDifferenceImageFilter< TDeformationField, TDeformationField >, and itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 82 of file itkImageToImageFilter.h.
typedef ImageToImageFilterDetail::ImageRegionCopier<itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension)> itk::ImageToImageFilter< TDeformationField , TDeformationField >::InputToOutputRegionCopierType [protected, inherited] |
Typedef for the region copier function object that converts an input region to an output region.
Definition at line 164 of file itkImageToImageFilter.h.
typedef int itk::LightObject::InternalReferenceCountType [protected, inherited] |
Define the type of the reference count according to the target. This allows the use of atomic operations
Definition at line 139 of file itkLightObject.h.
| typedef MovingImageType::ConstPointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::MovingImageConstPointer |
Definition at line 109 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef MovingImageType::Pointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::MovingImagePointer |
Definition at line 108 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef MovingImagePyramidType::Pointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::MovingImagePyramidPointer |
Definition at line 139 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef MultiResolutionPyramidImageFilter<MovingImageType, FloatImageType > itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::MovingImagePyramidType |
The moving multi-resolution image pyramid type.
Definition at line 138 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef TMovingImage itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::MovingImageType |
Moving image type.
Definition at line 107 of file itkMultiResolutionPDEDeformableRegistration.h.
typedef Superclass::OutputImagePixelType itk::ImageToImageFilter< TDeformationField , TDeformationField >::OutputImagePixelType [inherited] |
Reimplemented from itk::ImageSource< TDeformationField >.
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 79 of file itkImageToImageFilter.h.
typedef OutputImageType::Pointer itk::ImageSource< TDeformationField >::OutputImagePointer [inherited] |
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 69 of file itkImageSource.h.
typedef Superclass::OutputImageRegionType itk::ImageToImageFilter< TDeformationField , TDeformationField >::OutputImageRegionType [inherited] |
Superclass typedefs.
Reimplemented from itk::ImageSource< TDeformationField >.
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 75 of file itkImageToImageFilter.h.
typedef TDeformationField itk::ImageSource< TDeformationField >::OutputImageType [inherited] |
Some convenient typedefs.
Reimplemented in itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >, itk::DenseFiniteDifferenceImageFilter< TDeformationField, TDeformationField >, itk::FiniteDifferenceImageFilter< TDeformationField, TDeformationField >, and itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 65 of file itkImageSource.h.
typedef ImageToImageFilterDetail::ImageRegionCopier<itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension)> itk::ImageToImageFilter< TDeformationField , TDeformationField >::OutputToInputRegionCopierType [protected, inherited] |
Typedef for the region copier function object that converts an output region to an input region.
Definition at line 169 of file itkImageToImageFilter.h.
| typedef SmartPointer<Self> itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::Pointer |
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 91 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef RegistrationType::Pointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::RegistrationPointer |
Definition at line 125 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef PDEDeformableRegistrationFilter<FloatImageType, FloatImageType, DeformationFieldType > itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::RegistrationType |
The internal registration type.
Definition at line 124 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef MultiResolutionPDEDeformableRegistration itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::Self |
Standard class typedefs
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 88 of file itkMultiResolutionPDEDeformableRegistration.h.
| typedef ImageToImageFilter<TDeformationField, TDeformationField> itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::Superclass |
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
Definition at line 90 of file itkMultiResolutionPDEDeformableRegistration.h.
Constructor & Destructor Documentation
| itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::MultiResolutionPDEDeformableRegistration | ( | ) | [protected] |
| itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::~MultiResolutionPDEDeformableRegistration | ( | ) | [inline, protected] |
Definition at line 230 of file itkMultiResolutionPDEDeformableRegistration.h.
Member Function Documentation
| virtual void itk::ProcessObject::AbortGenerateDataOff | ( | ) | [virtual, inherited] |
| virtual void itk::ProcessObject::AbortGenerateDataOn | ( | ) | [virtual, inherited] |
Turn on and off the AbortGenerateData flag.
| virtual void itk::ProcessObject::AddInput | ( | DataObject * | input | ) | [protected, virtual, inherited] |
Protected methods for setting inputs. Subclasses make use of them for setting input.
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | const [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| virtual void itk::ProcessObject::AddOutput | ( | DataObject * | output | ) | [protected, virtual, inherited] |
Protected methods for setting outputs. Subclasses make use of them for getting output.
| virtual void itk::ImageSource< TDeformationField >::AfterThreadedGenerateData | ( | void | ) | [inline, protected, virtual, inherited] |
If an imaging filter needs to perform processing after all processing threads have completed, the filter can can provide an implementation for AfterThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.
Definition at line 265 of file itkImageSource.h.
| virtual void itk::ImageSource< TDeformationField >::AllocateOutputs | ( | ) | [protected, virtual, inherited] |
The GenerateData method normally allocates the buffers for all of the outputs of a filter. Some filters may want to override this default behavior. For example, a filter may have multiple outputs with varying resolution. Or a filter may want to process data in place by grafting its input to its output.
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
| virtual void itk::ImageSource< TDeformationField >::BeforeThreadedGenerateData | ( | void | ) | [inline, protected, virtual, inherited] |
If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.
Definition at line 253 of file itkImageSource.h.
| static void itk::LightObject::BreakOnError | ( | ) | [static, inherited] |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
| virtual void itk::ProcessObject::CacheInputReleaseDataFlags | ( | ) | [protected, virtual, inherited] |
Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().
| virtual void itk::ImageToImageFilter< TDeformationField , TDeformationField >::CallCopyInputRegionToOutputRegion | ( | OutputImageRegionType & | destRegion, | |
| const InputImageRegionType & | srcRegion | |||
| ) | [protected, virtual, inherited] |
This function calls the actual region copier to do the mapping from input image space to output image space. It uses a Function object used for dispatching to various routines to copy an input region (start index and size) to an output region. For most filters, this is a trivial copy because most filters require the input dimension to match the output dimension. However, some filters like itk::UnaryFunctorImageFilter can support output images of a higher dimension that the input.
This function object is used by the default implementation of GenerateOutputInformation(). It can also be used in routines like ThreadedGenerateData() where a filter may need to map an input region to an output region.
The default copier uses a "dispatch pattern" to call one of three overloaded functions depending on whether the input and output images are the same dimension, the input is a higher dimension that the output, or the input is of a lower dimension than the output. The use of an overloaded function is required for proper compilation of the various cases.
For the latter two cases, trivial implementations are used. If the input image is a higher dimension than the output, the first portion of the input region is copied to the output region. If the input region is a lower dimension than the output, the input region information is copied into the first portion of the output region and the rest of the output region is set to zero.
If a filter needs a different default behavior, it can override this method.
| virtual void itk::ImageToImageFilter< TDeformationField , TDeformationField >::CallCopyOutputRegionToInputRegion | ( | InputImageRegionType & | destRegion, | |
| const OutputImageRegionType & | srcRegion | |||
| ) | [protected, virtual, inherited] |
This function calls the actual region copier to do the mapping from output image space to input image space. It uses a Function object used for dispatching to various routines to copy an output region (start index and size) to an input region. For most filters, this is a trivial copy because most filters require the input dimension to match the output dimension. However, some filters like itk::ExtractImageFilter can support output images of a lower dimension that the input.
This function object can be used by GenerateOutputInformation() to copy the input LargestPossibleRegion to the output LargestPossibleRegion and can also be used in GenerateData or ThreadedGenerateData() where a filter may need to map an output region to an input region.
The default copier uses a "dispatch pattern" to call one of three overloaded functions depending on whether the input and output images are the same dimension, the input is a higher dimension that the output, or the input is of a lower dimension than the output. The use of an overloaded function is required for proper compilation of the various cases.
For the latter two cases, trivial implementations are used. If the input image is a higher dimension than the output, the output region information is copied into the first portion of the input region and the rest of the input region is set to zero. If the input region is a lower dimension than the output, the first portion of the output region is copied to the input region.
If a filter needs a different default behavior, it can override this method. The ExtractImageFilter overrides this function object so that if the input image is a higher dimension than the output image, the filter can control "where" in the input image the output subimage is extracted (as opposed to mapping to first few dimensions of the input).
| virtual LightObject::Pointer itk::Object::CreateAnother | ( | ) | const [virtual, inherited] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, itk::CreateObjectFunction< T >, itk::TransformFactoryBase, itk::AnalyzeImageIOFactory, itk::BioRadImageIOFactory, itk::BMPImageIOFactory, itk::Brains2MaskImageIOFactory, itk::DICOMImageIO2Factory, itk::DicomImageIOFactory, itk::GDCMImageIOFactory, itk::GE4ImageIOFactory, itk::GE5ImageIOFactory, itk::GEAdwImageIOFactory, itk::GiplImageIOFactory, itk::JPEGImageIOFactory, itk::LSMImageIOFactory, itk::MetaImageIOFactory, itk::NiftiImageIOFactory, itk::NrrdImageIOFactory, itk::PNGImageIOFactory, itk::RawImageIOFactory< TPixel, VImageDimension >, itk::SiemensVisionImageIOFactory, itk::StimulateImageIOFactory, itk::TIFFImageIOFactory, itk::VTKImageIOFactory, itk::Bruker2DSEQImageIOFactory, itk::MatlabTransformIOFactory, itk::MINC2ImageIOFactory, itk::MRCImageIOFactory, itk::PhilipsRECImageIOFactory, itk::TxtTransformIOFactory, itk::VoxBoCUBImageIOFactory, itk::VTKImageIO2Factory, and itk::SpatialObjectFactoryBase.
| virtual void itk::Object::DebugOff | ( | ) | const [virtual, inherited] |
Turn debugging output off.
| virtual void itk::Object::DebugOn | ( | ) | const [virtual, inherited] |
Turn debugging output on.
| virtual void itk::LightObject::Delete | ( | ) | [virtual, inherited] |
Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::EnlargeOutputRequestedRegion | ( | DataObject * | ptr | ) | [protected, virtual] |
The current implementation of this class does not supprot streaming. As such it produces the output for the largest possible region.
Reimplemented from itk::ProcessObject.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GenerateData | ( | ) | [protected, virtual] |
Generate output data by performing the registration at each resolution level.
Reimplemented from itk::ImageSource< TDeformationField >.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GenerateInputRequestedRegion | ( | ) | [protected, virtual] |
The current implementation of this class does not support streaming. As such it requires the largest possible region for the moving, fixed and input deformation field.
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GenerateOutputInformation | ( | ) | [protected, virtual] |
By default, the output deformation field has the same spacing, origin and LargestPossibleRegion as the input/initial deformation field.
If the initial deformation field is not set, the output information is copied from the fixed image.
Reimplemented from itk::ProcessObject.
| virtual void itk::ProcessObject::GenerateOutputRequestedRegion | ( | DataObject * | output | ) | [protected, virtual, inherited] |
Given one output whose requested region has been set, how should the requested regions for the remaining outputs of the process object be set? By default, all the outputs are set to the same requested region. If a filter needs to produce different requested regions for each output, for instance an image processing filter producing several outputs at different resolutions, then that filter may override this method and set the requested regions appropriatedly.
Note that a filter producing multiple outputs of different types is required to override this method. The default implementation can only correctly handle multiple outputs of the same type.
Reimplemented in itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::RecursiveMultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::watershed::BoundaryResolver< TPixelType, TDimension >, itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, itk::watershed::Relabeler< TScalarType, TImageDimension >, itk::watershed::Segmenter< TInputImage >, itk::watershed::SegmentTreeGenerator< TScalarType >, itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>, itk::watershed::Segmenter< InputImageType >, and itk::watershed::SegmentTreeGenerator< ScalarType >.
| virtual const bool& itk::ProcessObject::GetAbortGenerateData | ( | ) | [virtual, inherited] |
Get the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.
| Command* itk::Object::GetCommand | ( | unsigned long | tag | ) | [inherited] |
Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
| virtual const unsigned int& itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetCurrentLevel | ( | ) | [virtual] |
Get the current resolution level being processed.
| bool itk::Object::GetDebug | ( | ) | const [inherited] |
Get the value of the debug flag.
| const DeformationFieldType* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetDeformationField | ( | void | ) | [inline] |
Get output deformation field.
Definition at line 174 of file itkMultiResolutionPDEDeformableRegistration.h.
| virtual FieldExpanderType* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetFieldExpander | ( | ) | [virtual] |
Get the moving image pyramid.
| const FixedImageType* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetFixedImage | ( | void | ) | const |
Get the fixed image.
| virtual FixedImagePyramidType* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetFixedImagePyramid | ( | ) | [virtual] |
Get the fixed image pyramid.
| static bool itk::Object::GetGlobalWarningDisplay | ( | ) | [static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
| const InputImageType* itk::ImageToImageFilter< TDeformationField , TDeformationField >::GetInput | ( | void | ) | [inherited] |
Set/Get the image input of this process object.
| const InputImageType* itk::ImageToImageFilter< TDeformationField , TDeformationField >::GetInput | ( | unsigned int | idx | ) | [inherited] |
Set/Get the image input of this process object.
Reimplemented from itk::ProcessObject.
| const DataObject* itk::ProcessObject::GetInput | ( | unsigned int | idx | ) | const [protected, inherited] |
Method used internally for getting an input.
Reimplemented in itk::MeshToMeshFilter< TInputMesh, TOutputMesh >, and itk::MeshToMeshFilter< TInput, TOutput >.
| DataObjectPointerArray& itk::ProcessObject::GetInputs | ( | ) | [inline, inherited] |
Return an array with all the inputs of this process object. This is useful for tracing back in the pipeline to construct graphs etc.
Definition at line 108 of file itkProcessObject.h.
| MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | [inherited] |
- Returns:
- A reference to this objects MetaDataDictionary.
- Warning:
- This reference may be changed.
| const MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | const [inherited] |
- Returns:
- A constant reference to this objects MetaDataDictionary.
| const MovingImageType* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetMovingImage | ( | void | ) | const |
Get the moving image.
| virtual MovingImagePyramidType* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetMovingImagePyramid | ( | ) | [virtual] |
Get the moving image pyramid.
| virtual unsigned long itk::Object::GetMTime | ( | ) | const [virtual, inherited] |
Return this objects modified time.
Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.
Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().
| MultiThreader* itk::ProcessObject::GetMultiThreader | ( | ) | [inline, inherited] |
Return the multithreader used by this class.
Definition at line 284 of file itkProcessObject.h.
| virtual const char* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
| DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfInputs | ( | ) | const [inline, inherited] |
Get the size of the input vector. This is merely the size of the input vector, not the number of inputs that have valid DataObject's assigned. Use GetNumberOfValidRequiredInputs() to determine how many inputs are non-null.
Definition at line 118 of file itkProcessObject.h.
| virtual const unsigned int* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetNumberOfIterations | ( | ) | const [inline, virtual] |
Get number of iterations per multi-resolution levels.
Definition at line 222 of file itkMultiResolutionPDEDeformableRegistration.h.
| virtual const unsigned int& itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetNumberOfLevels | ( | ) | [virtual] |
Get number of multi-resolution levels.
| DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfOutputs | ( | ) | const [inline, inherited] |
Return an array with all the outputs of this process object. This is useful for tracing forward in the pipeline to contruct graphs etc.
Definition at line 135 of file itkProcessObject.h.
| virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredInputs | ( | ) | [protected, virtual, inherited] |
Protected methods for setting inputs. Subclasses make use of them for setting input.
| virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredOutputs | ( | ) | [protected, virtual, inherited] |
Protected methods for setting outputs. Subclasses make use of them for getting output.
| virtual const int& itk::ProcessObject::GetNumberOfThreads | ( | ) | [virtual, inherited] |
Get/Set the number of threads to create when executing.
Referenced by itk::BSplineScatteredDataPointSetToImageFilter< TInputPointSet, TOutputImage >::SplitRequestedRegion().
| virtual std::vector<SmartPointer<DataObject> >::size_type itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetNumberOfValidRequiredInputs | ( | ) | const [virtual] |
Get the number of valid inputs. For MultiResolutionPDEDeformableRegistration, this checks whether the fixed and moving images have been set. While MultiResolutionPDEDeformableRegistration can take a third input as an initial deformation field, this input is not a required input.
Reimplemented from itk::ProcessObject.
| OutputImageType* itk::ImageSource< TDeformationField >::GetOutput | ( | void | ) | [inherited] |
Get the output data of this process object. The output of this function is not valid until an appropriate Update() method has been called, either explicitly or implicitly. Both the filter itself and the data object have Update() methods, and both methods update the data. Here are three ways to use GetOutput() and make sure the data is valid. In these examples, image is a pointer to some Image object, and the particular ProcessObjects involved are filters. The same examples apply to non-image (e.g. Mesh) data as well.
anotherFilter->SetInput( someFilter->GetOutput() ); anotherFilter->Update();
In this situation, someFilter and anotherFilter are said to constitute a pipeline.
image = someFilter->GetOutput(); image->Update();
someFilter->Update(); image = someFilter->GetOutput();
(In the above example, the two lines of code can be in either order.)
Note that Update() is not called automatically except within a pipeline as in the first example. When streaming (using a StreamingImageFilter) is activated, it may be more efficient to use a pipeline than to call Update() once for each filter in turn.
For an image, the data generated is for the requested Region, which can be set using ImageBase::SetRequestedRegion(). By default, the largest possible region is requested.
For Filters which have multiple outputs of different types, the GetOutput() method assumes the output is of OutputImageType. For the GetOutput(unsigned int) method, a dynamic_cast is performed incase the filter has outputs of different types or image types. Derived classes should have names get methods for these outputs.
| OutputImageType* itk::ImageSource< TDeformationField >::GetOutput | ( | unsigned int | idx | ) | [inherited] |
Get the output data of this process object. The output of this function is not valid until an appropriate Update() method has been called, either explicitly or implicitly. Both the filter itself and the data object have Update() methods, and both methods update the data. Here are three ways to use GetOutput() and make sure the data is valid. In these examples, image is a pointer to some Image object, and the particular ProcessObjects involved are filters. The same examples apply to non-image (e.g. Mesh) data as well.
anotherFilter->SetInput( someFilter->GetOutput() ); anotherFilter->Update();
In this situation, someFilter and anotherFilter are said to constitute a pipeline.
image = someFilter->GetOutput(); image->Update();
someFilter->Update(); image = someFilter->GetOutput();
(In the above example, the two lines of code can be in either order.)
Note that Update() is not called automatically except within a pipeline as in the first example. When streaming (using a StreamingImageFilter) is activated, it may be more efficient to use a pipeline than to call Update() once for each filter in turn.
For an image, the data generated is for the requested Region, which can be set using ImageBase::SetRequestedRegion(). By default, the largest possible region is requested.
For Filters which have multiple outputs of different types, the GetOutput() method assumes the output is of OutputImageType. For the GetOutput(unsigned int) method, a dynamic_cast is performed incase the filter has outputs of different types or image types. Derived classes should have names get methods for these outputs.
Reimplemented from itk::ProcessObject.
| const DataObject* itk::ProcessObject::GetOutput | ( | unsigned int | idx | ) | const [protected, inherited] |
Method used internally for getting an output.
| DataObjectPointerArray& itk::ProcessObject::GetOutputs | ( | ) | [inline, inherited] |
Return an array with all the outputs of this process object. This is useful for tracing forward in the pipeline to contruct graphs etc.
Definition at line 133 of file itkProcessObject.h.
| virtual const float& itk::ProcessObject::GetProgress | ( | ) | [virtual, inherited] |
Get the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution.
Referenced by itk::XMLFilterWatcher::ShowProgress().
| virtual int itk::LightObject::GetReferenceCount | ( | ) | const [inline, virtual, inherited] |
Gets the reference count on this object.
Definition at line 106 of file itkLightObject.h.
| virtual RegistrationType* itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::GetRegistrationFilter | ( | ) | [virtual] |
Get the internal registrator.
| virtual const bool& itk::ProcessObject::GetReleaseDataBeforeUpdateFlag | ( | ) | [virtual, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released/reallocated during an Update(). In limited memory scenarios, a user may want to force the elements of a pipeline to release any bulk data that is going to be regenerated anyway during an Update() in order to control peak memory allocation. Note that this flag is different from the ReleaseDataFlag. ReleaseDataFlag manages the deallocation of a ProcessObject's bulk output data once that data has been consumed by a downstream ProcessObject. The ReleaseDataBeforeUpdateFlag manages the deallocation/reallocation of bulk data during a pipeline update to control peak memory utilization. Default value is on.
| virtual bool itk::ProcessObject::GetReleaseDataFlag | ( | ) | const [virtual, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released after being used by a downstream ProcessObject. Default value is off. Another options for controlling memory utilization is the ReleaseDataBeforeUpdateFlag.
| static void itk::Object::GlobalWarningDisplayOff | ( | ) | [inline, static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Definition at line 100 of file itkObject.h.
References itk::Object::SetGlobalWarningDisplay().
| static void itk::Object::GlobalWarningDisplayOn | ( | ) | [inline, static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Definition at line 98 of file itkObject.h.
References itk::Object::SetGlobalWarningDisplay().
| virtual void itk::ImageSource< TDeformationField >::GraftNthOutput | ( | unsigned int | idx, | |
| DataObject * | output | |||
| ) | [virtual, inherited] |
Graft the specified data object onto this ProcessObject's idx'th output. This is similar to the GraftOutput method except it allows you to specify which output is affected. The specified index must be a valid output number (less than ProcessObject::GetNumberOfOutputs()). See the GraftOutput for general usage information.
| virtual void itk::ImageSource< TDeformationField >::GraftOutput | ( | DataObject * | output | ) | [virtual, inherited] |
Graft the specified DataObject onto this ProcessObject's output. This method grabs a handle to the specified DataObject's bulk data to used as its output's own bulk data. It also copies the region ivars (RequestedRegion, BufferedRegion, LargestPossibleRegion) and meta-data (Spacing, Origin) from the specified data object into this filter's output data object. Most importantly, however, it leaves the Source ivar untouched so the original pipeline routing is intact. This method is used when a process object is implemented using a mini-pipeline which is defined in its GenerateData() method. The usage is:
// setup the mini-pipeline to process the input to this filter firstFilterInMiniPipeline->SetInput( this->GetInput() ); // setup the mini-pipeline to calculate the correct regions // and write to the appropriate bulk data block lastFilterInMiniPipeline->GraftOutput( this->GetOutput() ); // execute the mini-pipeline lastFilterInMiniPipeline->Update(); // graft the mini-pipeline output back onto this filter's output. // this is needed to get the appropriate regions passed back. this->GraftOutput( lastFilterInMiniPipeline->GetOutput() );
For proper pipeline execution, a filter using a mini-pipeline must implement the GenerateInputRequestedRegion(), GenerateOutputRequestedRegion(), GenerateOutputInformation() and EnlargeOutputRequestedRegion() methods as necessary to reflect how the mini-pipeline will execute (in other words, the outer filter's pipeline mechanism must be consistent with what the mini-pipeline will do).
| virtual bool itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::Halt | ( | ) | [protected, virtual] |
This method returns true to indicate that the registration should terminate at the current resolution level.
| bool itk::Object::HasObserver | ( | const EventObject & | event | ) | const [inherited] |
Return true if an observer is registered for this event.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | [inherited] |
Call Execute on all the Commands observing this event id.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | const [inherited] |
Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.
| virtual DataObjectPointer itk::ImageSource< TDeformationField >::MakeOutput | ( | unsigned int | idx | ) | [virtual, inherited] |
Make a DataObject of the correct type to used as the specified output. Every ProcessObject subclass must be able to create a DataObject that can be used as a specified output. This method is automatically called when DataObject::DisconnectPipeline() is called. DataObject::DisconnectPipeline, disconnects a data object from being an output of its current source. When the data object is disconnected, the ProcessObject needs to construct a replacement output data object so that the ProcessObject is in a valid state. So DataObject::DisconnectPipeline eventually calls ProcessObject::MakeOutput. Note that MakeOutput always returns a SmartPointer to a DataObject. If a subclass of ImageSource has multiple outputs of different types, then that class must provide an implementation of MakeOutput().
Reimplemented from itk::ProcessObject.
| virtual void itk::Object::Modified | ( | ) | const [virtual, inherited] |
Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.
Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, RankImageFilter< TInputImage, TInputImage, FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.
Referenced by itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().
| static Pointer itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::Object.
| virtual void itk::ImageToImageFilter< TDeformationField , TDeformationField >::PopBackInput | ( | ) | [virtual, inherited] |
Push/Pop the input of this process object. These methods allow a filter to model its input vector as a queue or stack. These routines may not be appropriate for all filters, especially filters with different types of inputs. These routines follow the semantics of STL.
The routines are useful for applications that need to process "rolling" sets of images. For instance, if an application has 10 images and they need to run a filter on images 1, 2, 3, 4, then run the filter on images 2, 3, 4, 5, then run the filter on images 3, 4, 5, 6, the application can accomplish this by popping an input off the front of the input list and push a new image onto the back of input list. Again, this only makes sense for filters that single type of input.
Other uses are also possible. For a single input filter, pushing and popping inputs allow the application to temporarily replace an input to a filter.
Reimplemented from itk::ProcessObject.
| virtual void itk::ImageToImageFilter< TDeformationField , TDeformationField >::PopFrontInput | ( | ) | [virtual, inherited] |
Push/Pop the input of this process object. These methods allow a filter to model its input vector as a queue or stack. These routines may not be appropriate for all filters, especially filters with different types of inputs. These routines follow the semantics of STL.
The routines are useful for applications that need to process "rolling" sets of images. For instance, if an application has 10 images and they need to run a filter on images 1, 2, 3, 4, then run the filter on images 2, 3, 4, 5, then run the filter on images 3, 4, 5, 6, the application can accomplish this by popping an input off the front of the input list and push a new image onto the back of input list. Again, this only makes sense for filters that single type of input.
Other uses are also possible. For a single input filter, pushing and popping inputs allow the application to temporarily replace an input to a filter.
Reimplemented from itk::ProcessObject.
| virtual void itk::ProcessObject::PrepareOutputs | ( | ) | [virtual, inherited] |
An opportunity to deallocate a ProcessObject's bulk data storage. Some filters may wish to reuse existing bulk data storage to avoid unnecessary deallocation/allocation sequences. The default implementation calls Initialize() on each output. DataObject::Initialize() frees its bulk data by default.
Reimplemented in itk::WatershedImageFilter< TInputImage >.
| void itk::LightObject::Print | ( | std::ostream & | os, | |
| Indent | indent = 0 | |||
| ) | const [inherited] |
Cause the object to print itself out.
Referenced by itk::WeakPointer< ProcessObject >::Print().
| virtual void itk::LightObject::PrintHeader | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| bool itk::Object::PrintObservers | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, inherited] |
| void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::PrintSelf | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ImageToImageFilter< TDeformationField, TDeformationField >.
| virtual void itk::LightObject::PrintTrailer | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| virtual void itk::ProcessObject::PropagateRequestedRegion | ( | DataObject * | output | ) | [virtual, inherited] |
Send the requested region information back up the pipeline (to the filters that preceed this one).
Reimplemented in itk::StreamingImageFilter< TInputImage, TOutputImage >, and itk::VTKImageImport< TOutputImage >.
| virtual void itk::ProcessObject::PropagateResetPipeline | ( | ) | [protected, virtual, inherited] |
Called to allocate the input array. Copies old inputs. Propagate a call to ResetPipeline() up the pipeline. Called only from DataObject.
| virtual void itk::ImageToImageFilter< TDeformationField , TDeformationField >::PushBackInput | ( | const InputImageType * | image | ) | [virtual, inherited] |
Push/Pop the input of this process object. These methods allow a filter to model its input vector as a queue or stack. These routines may not be appropriate for all filters, especially filters with different types of inputs. These routines follow the semantics of STL.
The routines are useful for applications that need to process "rolling" sets of images. For instance, if an application has 10 images and they need to run a filter on images 1, 2, 3, 4, then run the filter on images 2, 3, 4, 5, then run the filter on images 3, 4, 5, 6, the application can accomplish this by popping an input off the front of the input list and push a new image onto the back of input list. Again, this only makes sense for filters that single type of input.
Other uses are also possible. For a single input filter, pushing and popping inputs allow the application to temporarily replace an input to a filter.
| void itk::ImageToImageFilter< TDeformationField , TDeformationField >::PushBackInput | ( | const DataObject * | input | ) | [inline, protected, virtual, inherited] |
PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.
Reimplemented from itk::ProcessObject.
Definition at line 251 of file itkImageToImageFilter.h.
| virtual void itk::ImageToImageFilter< TDeformationField , TDeformationField >::PushFrontInput | ( | const InputImageType * | image | ) | [virtual, inherited] |
Push/Pop the input of this process object. These methods allow a filter to model its input vector as a queue or stack. These routines may not be appropriate for all filters, especially filters with different types of inputs. These routines follow the semantics of STL.
The routines are useful for applications that need to process "rolling" sets of images. For instance, if an application has 10 images and they need to run a filter on images 1, 2, 3, 4, then run the filter on images 2, 3, 4, 5, then run the filter on images 3, 4, 5, 6, the application can accomplish this by popping an input off the front of the input list and push a new image onto the back of input list. Again, this only makes sense for filters that single type of input.
Other uses are also possible. For a single input filter, pushing and popping inputs allow the application to temporarily replace an input to a filter.
| void itk::ImageToImageFilter< TDeformationField , TDeformationField >::PushFrontInput | ( | const DataObject * | input | ) | [inline, protected, virtual, inherited] |
PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.
Reimplemented from itk::ProcessObject.
Definition at line 253 of file itkImageToImageFilter.h.
| virtual void itk::Object::Register | ( | ) | const [virtual, inherited] |
Increase the reference count (mark as used by another object).
Reimplemented from itk::LightObject.
| virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOff | ( | ) | [virtual, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released/reallocated during an Update(). In limited memory scenarios, a user may want to force the elements of a pipeline to release any bulk data that is going to be regenerated anyway during an Update() in order to control peak memory allocation. Note that this flag is different from the ReleaseDataFlag. ReleaseDataFlag manages the deallocation of a ProcessObject's bulk output data once that data has been consumed by a downstream ProcessObject. The ReleaseDataBeforeUpdateFlag manages the deallocation/reallocation of bulk data during a pipeline update to control peak memory utilization. Default value is on.
| virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOn | ( | ) | [virtual, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released/reallocated during an Update(). In limited memory scenarios, a user may want to force the elements of a pipeline to release any bulk data that is going to be regenerated anyway during an Update() in order to control peak memory allocation. Note that this flag is different from the ReleaseDataFlag. ReleaseDataFlag manages the deallocation of a ProcessObject's bulk output data once that data has been consumed by a downstream ProcessObject. The ReleaseDataBeforeUpdateFlag manages the deallocation/reallocation of bulk data during a pipeline update to control peak memory utilization. Default value is on.
| void itk::ProcessObject::ReleaseDataFlagOff | ( | ) | [inline, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released after being used by a downstream ProcessObject. Default value is off. Another options for controlling memory utilization is the ReleaseDataBeforeUpdateFlag.
Definition at line 257 of file itkProcessObject.h.
| void itk::ProcessObject::ReleaseDataFlagOn | ( | ) | [inline, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released after being used by a downstream ProcessObject. Default value is off. Another options for controlling memory utilization is the ReleaseDataBeforeUpdateFlag.
Definition at line 256 of file itkProcessObject.h.
| virtual void itk::ProcessObject::ReleaseInputs | ( | ) | [protected, virtual, inherited] |
A filter may need to release its input's bulk data after it has finished calculating a new output. The filter may need to release the inputs because the user has turned on the ReleaseDataFlag or it may need to release the inputs because the filter is an "in place" filter and it has overwritten its input with its output data. The implementation here simply checks the ReleaseDataFlag of the inputs. InPlaceImageFilter overrides this method so release the input it has overwritten.
- See also:
- InPlaceImageFilter::ReleaseInputs()
Reimplemented in itk::InPlaceImageFilter< TInputImage, TOutputImage >, itk::InPlaceLabelMapFilter< TInputImage >, itk::InPlaceImageFilter< TInputImage, TOutputImage >, itk::InPlaceImageFilter< TDeformationField, TDeformationField >, itk::InPlaceImageFilter< TInputImage1, Functor::MakeJoin< TInputImage1, TInputImage2 >::ImageType >, itk::InPlaceImageFilter< TInputImage >, itk::InPlaceImageFilter< TInputImage, TSparseOutputImage >, itk::InPlaceImageFilter< TInputImage1, TOutputImage >, itk::InPlaceImageFilter< Image< TInputPixel1, NDimension >, Image< std::complex< TOutputPixel >, NDimension > >, itk::InPlaceImageFilter< TFeatureImage, TOutputImage >, itk::InPlaceImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::InPlaceImageFilter< TLabelImage, TOutputImage >, itk::InPlaceImageFilter< FeatureImageType, ImageType >, itk::InPlaceImageFilter< TInputImageType, TSparseOutputImageType >, itk::InPlaceImageFilter< TImage, TImage >, and itk::InPlaceLabelMapFilter< TImage >.
| void itk::Object::RemoveAllObservers | ( | ) | [inherited] |
Remove all observers .
| virtual void itk::ProcessObject::RemoveInput | ( | DataObject * | input | ) | [protected, virtual, inherited] |
Protected methods for setting inputs. Subclasses make use of them for setting input.
| void itk::Object::RemoveObserver | ( | unsigned long | tag | ) | [inherited] |
Remove the observer with this tag value.
| virtual void itk::ProcessObject::RemoveOutput | ( | DataObject * | output | ) | [protected, virtual, inherited] |
Protected methods for setting outputs. Subclasses make use of them for getting output.
| virtual void itk::ProcessObject::ResetPipeline | ( | ) | [virtual, inherited] |
| virtual void itk::ProcessObject::RestoreInputReleaseDataFlags | ( | ) | [protected, virtual, inherited] |
Restore the cached input ReleaseDataFlags.
| virtual void itk::ProcessObject::SetAbortGenerateData | ( | bool | _arg | ) | [virtual, inherited] |
Set the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetArbitraryInitialDeformationField | ( | DeformationFieldType * | ptr | ) | [inline, virtual] |
Set initial deformation field. No assumption is made on the input. It will therefore be smoothed and resampled to match the images characteristics at the coarsest level of the pyramid.
Definition at line 168 of file itkMultiResolutionPDEDeformableRegistration.h.
| void itk::Object::SetDebug | ( | bool | debugFlag | ) | const [inherited] |
Set the value of the debug flag. A non-zero value turns debugging on.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetFieldExpander | ( | FieldExpanderType * | _arg | ) | [virtual] |
Set the moving image pyramid.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetFixedImage | ( | const FixedImageType * | ptr | ) | [virtual] |
Set the fixed image.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetFixedImagePyramid | ( | FixedImagePyramidType * | _arg | ) | [virtual] |
Set the fixed image pyramid.
| static void itk::Object::SetGlobalWarningDisplay | ( | bool | flag | ) | [static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetInitialDeformationField | ( | DeformationFieldType * | ptr | ) | [inline, virtual] |
Set initial deformation field to be used as is (no smoothing, no subsampling at the coarsest level of the pyramid.
Definition at line 160 of file itkMultiResolutionPDEDeformableRegistration.h.
| virtual void itk::ImageToImageFilter< TDeformationField , TDeformationField >::SetInput | ( | unsigned | int, | |
| const TDeformationField * | image | |||
| ) | [virtual, inherited] |
Set/Get the image input of this process object.
| virtual void itk::ImageToImageFilter< TDeformationField , TDeformationField >::SetInput | ( | const InputImageType * | image | ) | [virtual, inherited] |
Set/Get the image input of this process object.
| void itk::Object::SetMetaDataDictionary | ( | const MetaDataDictionary & | rhs | ) | [inherited] |
- Returns:
- Set the MetaDataDictionary
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetMovingImage | ( | const MovingImageType * | ptr | ) | [virtual] |
Set the moving image.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetMovingImagePyramid | ( | MovingImagePyramidType * | _arg | ) | [virtual] |
Set the moving image pyramid.
| virtual void itk::ProcessObject::SetNthInput | ( | unsigned int | num, | |
| DataObject * | input | |||
| ) | [protected, virtual, inherited] |
Protected methods for setting inputs. Subclasses make use of them for setting input.
Reimplemented in itk::ImageToVectorImageFilter< TInputImage >.
Referenced by itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetBoundaryA(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetBoundaryB(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetEquivalencyTable(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetFeatureImage(), itk::NarrowBandLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetFeatureImage(), itk::WatershedImageFilter< TInputImage >::SetInput(), itk::watershed::SegmentTreeGenerator< ScalarType >::SetInputEquivalencyTable(), itk::watershed::Segmenter< InputImageType >::SetInputImage(), itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>::SetInputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetInputImage(), itk::watershed::SegmentTreeGenerator< ScalarType >::SetInputSegmentTable(), itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>::SetInputSegmentTree(), itk::DiffusionTensor3DReconstructionImageFilter< TReferenceImagePixelType, TGradientImagePixelType, TTensorPixelType >::SetReferenceImage(), and itk::ChangeInformationImageFilter< TInputImage >::SetReferenceImage().
| virtual void itk::ProcessObject::SetNthOutput | ( | unsigned int | num, | |
| DataObject * | output | |||
| ) | [protected, virtual, inherited] |
Protected methods for setting outputs. Subclasses make use of them for getting output.
Referenced by itk::watershed::BoundaryResolver< TPixelType, TDimension >::BoundaryResolver(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::EquivalenceRelabeler(), itk::watershed::Segmenter< InputImageType >::SetBoundary(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetEquivalencyTable(), itk::watershed::Segmenter< InputImageType >::SetOutputImage(), itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>::SetOutputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetOutputImage(), and itk::watershed::Segmenter< InputImageType >::SetSegmentTable().
| void itk::ProcessObject::SetNumberOfInputs | ( | unsigned int | num | ) | [protected, inherited] |
Called to allocate the input array. Copies old inputs.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetNumberOfIterations | ( | unsigned int | data[] | ) | [virtual] |
Set number of iterations per multi-resolution levels.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetNumberOfLevels | ( | unsigned int | num | ) | [virtual] |
Set number of multi-resolution levels.
| void itk::ProcessObject::SetNumberOfOutputs | ( | unsigned int | num | ) | [protected, inherited] |
Called to allocate the output array. Copies old outputs.
| virtual void itk::ProcessObject::SetNumberOfRequiredInputs | ( | unsigned int | _arg | ) | [protected, virtual, inherited] |
Protected methods for setting inputs. Subclasses make use of them for setting input.
| virtual void itk::ProcessObject::SetNumberOfRequiredOutputs | ( | unsigned int | _arg | ) | [protected, virtual, inherited] |
Protected methods for setting outputs. Subclasses make use of them for getting output.
| virtual void itk::ProcessObject::SetNumberOfThreads | ( | int | _arg | ) | [virtual, inherited] |
Get/Set the number of threads to create when executing.
Reimplemented in itk::GradientMagnitudeRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::NonThreadedShrinkImageFilter< TInputImage, TOutputImage >, itk::SmoothingRecursiveGaussianImageFilter< TInputImage, TOutputImage >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, RankImageFilter< TInputImage, TInputImage, FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.
| virtual void itk::ProcessObject::SetProgress | ( | float | _arg | ) | [virtual, inherited] |
Set the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution. The ProgressEvent is NOT invoked.
| virtual void itk::Object::SetReferenceCount | ( | int | ) | [virtual, inherited] |
Sets the reference count (use with care)
Reimplemented from itk::LightObject.
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::SetRegistrationFilter | ( | RegistrationType * | _arg | ) | [virtual] |
Set the internal registrator.
| virtual void itk::ProcessObject::SetReleaseDataBeforeUpdateFlag | ( | bool | _arg | ) | [virtual, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released/reallocated during an Update(). In limited memory scenarios, a user may want to force the elements of a pipeline to release any bulk data that is going to be regenerated anyway during an Update() in order to control peak memory allocation. Note that this flag is different from the ReleaseDataFlag. ReleaseDataFlag manages the deallocation of a ProcessObject's bulk output data once that data has been consumed by a downstream ProcessObject. The ReleaseDataBeforeUpdateFlag manages the deallocation/reallocation of bulk data during a pipeline update to control peak memory utilization. Default value is on.
| virtual void itk::ProcessObject::SetReleaseDataFlag | ( | bool | flag | ) | [virtual, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released after being used by a downstream ProcessObject. Default value is off. Another options for controlling memory utilization is the ReleaseDataBeforeUpdateFlag.
| virtual int itk::ImageSource< TDeformationField >::SplitRequestedRegion | ( | int | i, | |
| int | num, | |||
| OutputImageRegionType & | splitRegion | |||
| ) | [protected, virtual, inherited] |
Split the output's RequestedRegion into "num" pieces, returning region "i" as "splitRegion". This method is called "num" times. The regions must not overlap. The method returns the number of pieces that the routine is capable of splitting the output RequestedRegion, i.e. return value is less than or equal to "num".
| virtual void itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::StopRegistration | ( | ) | [virtual] |
Stop the registration after the current iteration.
| virtual void itk::ImageSource< TDeformationField >::ThreadedGenerateData | ( | const OutputImageRegionType & | outputRegionForThread, | |
| int | threadId | |||
| ) | [protected, virtual, inherited] |
If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). This superclass will automatically split the output image into a number of pieces, spawn multiple threads, and call ThreadedGenerateData() in each thread. Prior to spawning threads, the BeforeThreadedGenerateData() method is called. After all the threads have completed, the AfterThreadedGenerateData() method is called. If an image processing filter cannot support threading, that filter should provide an implementation of the GenerateData() method instead of providing an implementation of ThreadedGenerateData(). If a filter provides a GenerateData() method as its implementation, then the filter is responsible for allocating the output data. If a filter provides a ThreadedGenerateData() method as its implementation, then the output memory will allocated automatically by this superclass. The ThreadedGenerateData() method should only produce the output specified by "outputThreadRegion" parameter. ThreadedGenerateData() cannot write to any other portion of the output image (as this is responsibility of a different thread).
- See also:
- GenerateData(), SplitRequestedRegion()
| static ITK_THREAD_RETURN_TYPE itk::ImageSource< TDeformationField >::ThreaderCallback | ( | void * | arg | ) | [static, protected, inherited] |
Static function used as a "callback" by the MultiThreader. The threading library will call this routine for each thread, which will delegate the control to ThreadedGenerateData().
| virtual void itk::Object::UnRegister | ( | ) | const [virtual, inherited] |
Decrease the reference count (release by another object).
Reimplemented from itk::LightObject.
| virtual void itk::ProcessObject::Update | ( | ) | [virtual, inherited] |
Bring this filter up-to-date. Update() checks modified times against last execution times, and re-executes objects if necessary. A side effect of this method is that the whole pipeline may execute in order to bring this filter up-to-date. This method updates the currently prescribed requested region. If no requested region has been set on the output, then the requested region will be set to the largest possible region. Once the requested region is set, Update() will make sure the specified requested region is up-to-date. This is a confusing side effect to users who are just calling Update() on a filter. A first call to Update() will cause the largest possible region to be updated. A second call to Update() will update that same region. If a modification to the upstream pipeline cause a filter to have a different largest possible region, this second call to Update() will not cause the output requested region to be reset to the new largest possible region. Instead, the output requested region will be the same as the last time Update() was called. To have a filter always to produce its largest possible region, users should call UpdateLargestPossibleRegion() instead.
Reimplemented in itk::CoreAtomImageToUnaryCorrespondenceMatrixProcess< TSourceImage >, itk::MedialNodePairCorrespondenceProcess< TSourceImage >, itk::MedialNodeTripletCorrespondenceProcess< TSourceImage >, itk::CoreAtomImageToDistanceMatrixProcess< TSourceImage >, itk::ImageFileWriter< TInputImage >, and itk::ImageSeriesWriter< TInputImage, TOutputImage >.
| virtual void itk::ProcessObject::UpdateLargestPossibleRegion | ( | ) | [virtual, inherited] |
Like Update(), but sets the output requested region to the largest possible region for the output. This is the method users should call if they want the entire dataset to be processed. If a user wants to update the same output region as a previous call to Update() or a previous call to UpdateLargestPossibleRegion(), then they should call the method Update().
| virtual void itk::ProcessObject::UpdateOutputData | ( | DataObject * | output | ) | [virtual, inherited] |
Actually generate new output
Reimplemented in itk::StreamingImageFilter< TInputImage, TOutputImage >.
| virtual void itk::ProcessObject::UpdateOutputInformation | ( | ) | [virtual, inherited] |
Update the information decribing the output data. This method transverses up the pipeline gathering modified time information. On the way back down the pipeline, this method calls GenerateOutputInformation() to set any necessary information about the output data objects. For instance, a filter that shrinks an image will need to provide an implementation for GenerateOutputInformation() that changes the spacing of the pixels. Such filters should call their superclass' implementation of GenerateOutputInformation prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.
Reimplemented in itk::watershed::Segmenter< TInputImage >, itk::VTKImageImport< TOutputImage >, and itk::watershed::Segmenter< InputImageType >.
| void itk::ProcessObject::UpdateProgress | ( | float | amount | ) | [inherited] |
Update the progress of the process object.
Sets the Progress ivar to amount and invokes any observers for the ProgressEvent. The parameter amount should be in [0,1] and is the cumulative (not incremental) progress.
Member Data Documentation
const unsigned int itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >::ImageDimension = FixedImageType::ImageDimension [static] |
ImageDimension.
Definition at line 117 of file itkMultiResolutionPDEDeformableRegistration.h.
const unsigned int itk::ImageToImageFilter< TDeformationField , TDeformationField >::InputImageDimension [static, inherited] |
ImageDimension constants
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 90 of file itkImageToImageFilter.h.
TimeStamp itk::ProcessObject::m_OutputInformationMTime [protected, inherited] |
Time when GenerateOutputInformation was last called.
Definition at line 431 of file itkProcessObject.h.
InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited] |
Number of uses of this object by other objects.
Definition at line 144 of file itkLightObject.h.
SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited] |
Mutex lock to protect modification to the reference count
Definition at line 147 of file itkLightObject.h.
bool itk::ProcessObject::m_Updating [protected, inherited] |
These ivars are made protected so filters like itkStreamingImageFilter can access them directly. This flag indicates when the pipeline is executing. It prevents infinite recursion when pipelines have loops.
Definition at line 428 of file itkProcessObject.h.
const unsigned int itk::ImageToImageFilter< TDeformationField , TDeformationField >::OutputImageDimension [static, inherited] |
ImageDimension constants
Reimplemented from itk::ImageSource< TDeformationField >.
Reimplemented in itk::InPlaceImageFilter< TDeformationField, TDeformationField >.
Definition at line 92 of file itkImageToImageFilter.h.
The documentation for this class was generated from the following file:
