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itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer > Class Template Reference

This class computes a grey-level co-occurence matrix (histogram) from a given image and mask. GLCM's are used for image texture description. More...

#include <itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h>

Inheritance diagram for itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >:
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Collaboration diagram for itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >:
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List of all members.

Public Types

typedef SmartPointer< const Self > ConstPointer
typedef HistogramType::ConstPointer HistogramConstPointer
typedef HistogramType::Pointer HistogramPointer
typedef Histogram
< MeasurementType,
2, THistogramFrequencyContainer > 		HistogramType
typedef ImageType::ConstPointer ImageConstPointer
typedef ImageType::Pointer ImagePointer
typedef TImageType ImageType
typedef NumericTraits
< PixelType >::RealType 		MeasurementType
typedef
HistogramType::MeasurementVectorType 		MeasurementVectorType
typedef ImageType::OffsetType OffsetType
typedef VectorContainer
< unsigned char, OffsetType > 		OffsetVector
typedef OffsetVector::ConstPointer OffsetVectorConstPointer
typedef OffsetVector::Pointer OffsetVectorPointer
typedef ImageType::PixelType PixelType
typedef SmartPointer< Self > Pointer
typedef ImageType::SizeType RadiusType
typedef ImageType::RegionType RegionType
typedef
MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator 		Self
typedef
ScalarImageToGreyLevelCooccurrenceMatrixGenerator
< TImageType,
THistogramFrequencyContainer > 		Superclass

Public Member Functions

void Compute (void)
virtual LightObject::Pointer CreateAnother () const
virtual void DebugOff () const
virtual void DebugOn () const
virtual void Delete ()
Command * GetCommand (unsigned long tag)
bool GetDebug () const
MetaDataDictionary & GetMetaDataDictionary (void)
const MetaDataDictionary & GetMetaDataDictionary (void) const
virtual unsigned long GetMTime () const
virtual const char * GetNameOfClass () const
virtual HistogramType * GetOutput ()
virtual int GetReferenceCount () const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &) const
void InvokeEvent (const EventObject &)
virtual void Modified () const
void Print (std::ostream &os, Indent indent=0) const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const

virtual void SetImageMask (const ImageType *_arg)
virtual const ImageType * GetImageMask ()

virtual void SetInsidePixelValue (PixelType _arg)
virtual PixelType GetInsidePixelValue ()

virtual void SetInput (const ImageType *_arg)
virtual const ImageType * GetInput ()

virtual void SetOffsets (const OffsetVector *_arg)
virtual const OffsetVector * GetOffsets ()
void SetOffset (const OffsetType offset)

virtual void SetNumberOfBinsPerAxis (unsigned int _arg)
virtual unsigned int GetNumberOfBinsPerAxis ()

void SetPixelValueMinMax (PixelType min, PixelType max)
virtual PixelType GetMin ()
virtual PixelType GetMax ()

virtual void SetNormalize (bool _arg)
virtual bool GetNormalize ()
virtual void NormalizeOn ()
virtual void NormalizeOff ()

unsigned long AddObserver (const EventObject &event, Command *)
unsigned long AddObserver (const EventObject &event, Command *) const

Static Public Member Functions

static void BreakOnError ()
static Pointer New ()

static void SetGlobalWarningDisplay (bool flag)
static bool GetGlobalWarningDisplay ()
static void GlobalWarningDisplayOn ()
static void GlobalWarningDisplayOff ()

Static Public Attributes

static const unsigned int DefaultBinsPerAxis = 256

Protected Types

typedef int InternalReferenceCountType

Protected Member Functions

void FillHistogram (RadiusType radius, RegionType region)
virtual void FillHistogram (RadiusType radius, RegionType region)
 MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator ()
bool PrintObservers (std::ostream &os, Indent indent) const
void PrintSelf (std::ostream &os, Indent indent) const
virtual ~MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator ()

virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const

Protected Attributes

InternalReferenceCountType m_ReferenceCount
SimpleFastMutexLock m_ReferenceCountLock

Detailed Description

template<class TImageType, class THistogramFrequencyContainer = DenseFrequencyContainer>
class itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >

This class computes a grey-level co-occurence matrix (histogram) from a given image and mask. GLCM's are used for image texture description.

For details about the general method, see the documentation for the ScalarImageToGreyLevelCooccurrenceMatrixGenerator class.

This class differs in that a mask may be set. The GLCM will only be populated with co-occurence measurements where both the pixel in question and the offset pixel both fall in the masked region. The mask must be the same size as the input image.

If no mask is set, the behavior is exactly the same as the ScalarImageToGreyLevelCooccurrenceMatrixGenerator class.

See also:
ScalarImageToGreyLevelCooccurrenceMatrixGenerator
GreyLevelCooccurrenceMatrixTextureCoefficientsCalculator
ScalarImageTextureCalculator

Author: Zachary Pincus

Definition at line 50 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

Member Typedef Documentation

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef SmartPointer<const Self> itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::ConstPointer

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 60 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef HistogramType::ConstPointer itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::HistogramConstPointer

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 84 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef HistogramType::Pointer itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::HistogramPointer

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 83 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef Histogram< MeasurementType, 2, THistogramFrequencyContainer > itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::HistogramType

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 82 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef ImageType::ConstPointer itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::ImageConstPointer

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 70 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef ImageType::Pointer itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::ImagePointer

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 69 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef TImageType itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::ImageType

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 66 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

typedef int itk::LightObject::InternalReferenceCountType [protected, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 139 of file itkLightObject.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef NumericTraits<PixelType>::RealType itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::MeasurementType

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 79 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef HistogramType::MeasurementVectorType itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::MeasurementVectorType

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 85 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef ImageType::OffsetType itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::OffsetType

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 74 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef VectorContainer<unsigned char, OffsetType> itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::OffsetVector

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 75 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef OffsetVector::ConstPointer itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::OffsetVectorConstPointer

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 77 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef OffsetVector::Pointer itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::OffsetVectorPointer

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 76 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef ImageType::PixelType itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::PixelType

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 71 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef SmartPointer<Self> itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::Pointer

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 59 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef ImageType::SizeType itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::RadiusType

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 73 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef ImageType::RegionType itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::RegionType

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 72 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::Self

Standard typedefs

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 56 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
typedef ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer > itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::Superclass

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

Definition at line 58 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

Constructor & Destructor Documentation

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator (  )  [protected]
template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::~MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator (  )  [inline, protected, virtual]

Definition at line 102 of file itkMaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

Member Function Documentation

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) [inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) const [inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

static void itk::LightObject::BreakOnError (  )  [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::Compute ( void   )  [inherited]

Triggers the Computation of the histogram

virtual LightObject::Pointer itk::Object::CreateAnother (  )  const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, itk::CreateObjectFunction< T >, itk::TransformFactoryBase, itk::AnalyzeImageIOFactory, itk::BioRadImageIOFactory, itk::BMPImageIOFactory, itk::Brains2MaskImageIOFactory, itk::DICOMImageIO2Factory, itk::DicomImageIOFactory, itk::GDCMImageIOFactory, itk::GE4ImageIOFactory, itk::GE5ImageIOFactory, itk::GEAdwImageIOFactory, itk::GiplImageIOFactory, itk::JPEGImageIOFactory, itk::LSMImageIOFactory, itk::MetaImageIOFactory, itk::NiftiImageIOFactory, itk::NrrdImageIOFactory, itk::PNGImageIOFactory, itk::RawImageIOFactory< TPixel, VImageDimension >, itk::SiemensVisionImageIOFactory, itk::StimulateImageIOFactory, itk::TIFFImageIOFactory, itk::VTKImageIOFactory, itk::Bruker2DSEQImageIOFactory, itk::MatlabTransformIOFactory, itk::MINC2ImageIOFactory, itk::MRCImageIOFactory, itk::PhilipsRECImageIOFactory, itk::TxtTransformIOFactory, itk::VoxBoCUBImageIOFactory, itk::VTKImageIO2Factory, and itk::SpatialObjectFactoryBase.

virtual void itk::Object::DebugOff (  )  const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn (  )  const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete (  )  [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
void itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::FillHistogram ( RadiusType  radius,
RegionType  region 
) [protected]
template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::FillHistogram ( RadiusType  radius,
RegionType  region 
) [protected, virtual, inherited]
Command* itk::Object::GetCommand ( unsigned long  tag  )  [inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

bool itk::Object::GetDebug (  )  const [inherited]

Get the value of the debug flag.

static bool itk::Object::GetGlobalWarningDisplay (  )  [static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual const ImageType* itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetImageMask (  )  [virtual]

Connects the mask image for which the histogram is going to be computed

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual const ImageType* itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetInput (  )  [virtual, inherited]

Connects the input image for which the histogram is going to be computed

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual PixelType itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetInsidePixelValue (  )  [virtual]

Set the pixel value of the mask that should be considered "inside" the object. Defaults to one.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual PixelType itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetMax (  )  [virtual, inherited]

Set the min and max (inclusive) pixel value that will be placed in the histogram

MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  [inherited]
Returns:
A reference to this objects MetaDataDictionary.
Warning:
This reference may be changed.
const MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  const [inherited]
Returns:
A constant reference to this objects MetaDataDictionary.
template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual PixelType itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetMin (  )  [virtual, inherited]

Set the min and max (inclusive) pixel value that will be placed in the histogram

virtual unsigned long itk::Object::GetMTime (  )  const [virtual, inherited]

Return this objects modified time.

Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.

Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual const char* itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetNameOfClass (  )  const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual bool itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetNormalize (  )  [virtual, inherited]

Set the calculator to normalize the histogram (divide all bins by the total frequency). Normalization is off by default.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual unsigned int itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetNumberOfBinsPerAxis (  )  [virtual, inherited]

Set number of histogram bins along each axis

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual const OffsetVector* itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetOffsets (  )  [virtual, inherited]

Set the offset or offsets over which the co-occurrence pairs will be computed. Calling either of these methods clears the previous offsets.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual HistogramType* itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::GetOutput (  )  [virtual, inherited]

Return the histogram.

Warning:
This output is only valid after the Compute() method has been invoked
See also:
Compute
virtual int itk::LightObject::GetReferenceCount (  )  const [inline, virtual, inherited]

Gets the reference count on this object.

Definition at line 106 of file itkLightObject.h.

static void itk::Object::GlobalWarningDisplayOff (  )  [inline, static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

static void itk::Object::GlobalWarningDisplayOn (  )  [inline, static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

bool itk::Object::HasObserver ( const EventObject &  event  )  const [inherited]

Return true if an observer is registered for this event.

void itk::Object::InvokeEvent ( const EventObject &   )  [inherited]

Call Execute on all the Commands observing this event id.

void itk::Object::InvokeEvent ( const EventObject &   )  const [inherited]

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

virtual void itk::Object::Modified (  )  const [virtual, inherited]

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, RankImageFilter< TInputImage, TInputImage, FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.

Referenced by itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
static Pointer itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::New (  )  [static]

standard New() method support

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::NormalizeOff (  )  [virtual, inherited]

Set the calculator to normalize the histogram (divide all bins by the total frequency). Normalization is off by default.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::NormalizeOn (  )  [virtual, inherited]

Set the calculator to normalize the histogram (divide all bins by the total frequency). Normalization is off by default.

void itk::LightObject::Print ( std::ostream &  os,
Indent  indent = 0 
) const [inherited]

Cause the object to print itself out.

Referenced by itk::WeakPointer< ProcessObject >::Print().

virtual void itk::LightObject::PrintHeader ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

bool itk::Object::PrintObservers ( std::ostream &  os,
Indent  indent 
) const [protected, inherited]
template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
void itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >.

virtual void itk::LightObject::PrintTrailer ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

virtual void itk::Object::Register (  )  const [virtual, inherited]

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

void itk::Object::RemoveAllObservers (  )  [inherited]

Remove all observers .

void itk::Object::RemoveObserver ( unsigned long  tag  )  [inherited]

Remove the observer with this tag value.

void itk::Object::SetDebug ( bool  debugFlag  )  const [inherited]

Set the value of the debug flag. A non-zero value turns debugging on.

static void itk::Object::SetGlobalWarningDisplay ( bool  flag  )  [static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetImageMask ( const ImageType *  _arg  )  [virtual]

Connects the mask image for which the histogram is going to be computed

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetInput ( const ImageType *  _arg  )  [virtual, inherited]

Connects the input image for which the histogram is going to be computed

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::MaskedScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetInsidePixelValue ( PixelType  _arg  )  [virtual]

Set the pixel value of the mask that should be considered "inside" the object. Defaults to one.

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary &  rhs  )  [inherited]
Returns:
Set the MetaDataDictionary
template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetNormalize ( bool  _arg  )  [virtual, inherited]

Set the calculator to normalize the histogram (divide all bins by the total frequency). Normalization is off by default.

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetNumberOfBinsPerAxis ( unsigned int  _arg  )  [virtual, inherited]

Set number of histogram bins along each axis

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetOffset ( const OffsetType  offset  )  [inline, inherited]

Set the offset or offsets over which the co-occurrence pairs will be computed. Calling either of these methods clears the previous offsets.

Definition at line 142 of file itkScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

References itk::VectorContainer< TElementIdentifier, TElement >::New(), and itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetOffsets().

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
virtual void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetOffsets ( const OffsetVector *  _arg  )  [virtual, inherited]

Set the offset or offsets over which the co-occurrence pairs will be computed. Calling either of these methods clears the previous offsets.

Referenced by itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetOffset().

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
void itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::SetPixelValueMinMax ( PixelType  min,
PixelType  max 
) [inherited]

Set the min and max (inclusive) pixel value that will be placed in the histogram

virtual void itk::Object::SetReferenceCount ( int   )  [virtual, inherited]

Sets the reference count (use with care)

Reimplemented from itk::LightObject.

virtual void itk::Object::UnRegister (  )  const [virtual, inherited]

Decrease the reference count (release by another object).

Reimplemented from itk::LightObject.

Member Data Documentation

template<class TImageType , class THistogramFrequencyContainer = DenseFrequencyContainer>
const unsigned int itk::Statistics::ScalarImageToGreyLevelCooccurrenceMatrixGenerator< TImageType, THistogramFrequencyContainer >::DefaultBinsPerAxis = 256 [static, inherited]

Definition at line 127 of file itkScalarImageToGreyLevelCooccurrenceMatrixGenerator.h.

InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects.

Definition at line 144 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count

Definition at line 147 of file itkLightObject.h.

The documentation for this class was generated from the following file:
Generated at Tue Jul 13 2010 04:08:43 for ITK by doxygen 1.7.1 written by Dimitri van Heesch, © 1997-2000