#include <itkMRCHeaderObject.h>

Public Attributes
float	alpha
float	beta
float	gamma
int16_t	idtype
int16_t	lens
int32_t	mode
int32_t	mx
int32_t	my
int32_t	mz
int16_t	nd1
int16_t	nd2
int16_t	nint
int8_t	notused2 [28]
int16_t	nreal
int32_t	nxstart
int32_t	nystart
int32_t	nzstart
float	rms
float	tiltangles [6]
int16_t	vd1
int16_t	vd2
float	xlen
float	xorg
float	ylen
float	yorg
float	zlen
float	zorg

Detailed Description

plain old data structure of the MRC header as used by IMOD. This header must be 1024 bytes.

The structure of the MRC header taken from: http://bio3d.colorado.edu/imod/doc/mrc_format.txt with permision from David Mastronarde on 8/21/2009

Definition at line 63 of file itkMRCHeaderObject.h.

Member Data Documentation

float itk::MRCHeaderObject::Header::alpha

cell angles (ignored)

Definition at line 101 of file itkMRCHeaderObject.h.

float itk::MRCHeaderObject::Header::beta

Definition at line 102 of file itkMRCHeaderObject.h.

float itk::MRCHeaderObject::Header::gamma

map column 1=x,2=y,3=z. (ignored) map row 1=x,2=y,3=z. (ignored) map section 1=x,2=y,3=z. (ignored)

Definition at line 106 of file itkMRCHeaderObject.h.

int16_t itk::MRCHeaderObject::Header::idtype

Definition at line 160 of file itkMRCHeaderObject.h.

int16_t itk::MRCHeaderObject::Header::lens

Definition at line 161 of file itkMRCHeaderObject.h.

int32_t itk::MRCHeaderObject::Header::mode

< Number of Columns < Number of Rows < Number of Sections Types of pixel in image. Values used by IMOD: 0 = unsigned bytes, 1 = signed short integers (16 bits), 2 = float, 3 = short * 2, (used for complex data) 4 = float * 2, (used for complex data) 6 = unsigned 16-bit integers (non-standard) 16 = unsigned char * 3 (for rgb data, non-standard)

Definition at line 81 of file itkMRCHeaderObject.h.

int32_t itk::MRCHeaderObject::Header::mx

Grid size in X, Y, and Z

Definition at line 90 of file itkMRCHeaderObject.h.

int32_t itk::MRCHeaderObject::Header::my

Definition at line 91 of file itkMRCHeaderObject.h.

int32_t itk::MRCHeaderObject::Header::mz

Definition at line 92 of file itkMRCHeaderObject.h.

int16_t itk::MRCHeaderObject::Header::nd1

Definition at line 162 of file itkMRCHeaderObject.h.

int16_t itk::MRCHeaderObject::Header::nd2

Definition at line 163 of file itkMRCHeaderObject.h.

int16_t itk::MRCHeaderObject::Header::nint

< Minimum pixel value. < Maximum pixel value. < Mean pixel value. < image type < space group number < number of bytes in extended header < Creator ID < extra data (not used)

Definition at line 140 of file itkMRCHeaderObject.h.

int8_t itk::MRCHeaderObject::Header::notused2[28]

extra data (not used)

Definition at line 157 of file itkMRCHeaderObject.h.

int16_t itk::MRCHeaderObject::Header::nreal

Definition at line 142 of file itkMRCHeaderObject.h.

int32_t itk::MRCHeaderObject::Header::nxstart

Starting point of sub image. (ignored)

Definition at line 84 of file itkMRCHeaderObject.h.

int32_t itk::MRCHeaderObject::Header::nystart

Definition at line 85 of file itkMRCHeaderObject.h.

int32_t itk::MRCHeaderObject::Header::nzstart