ITK: itk::MedialNodePairCorrespondenceProcess< TSourceImage

template<typename TSourceImage>

typedef BinaryMedialNodeMetric<itkGetStaticConstMacro(NDimensions)>::Pointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::BinaryMetricPointer

Definition at line 91 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef BinaryMedialNodeMetric<itkGetStaticConstMacro(NDimensions)> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::BinaryMetricType

Typedef for binary node metric.

Definition at line 90 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef SmartPointer<const Self> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::ConstPointer

Reimplemented from itk::ProcessObject.

Definition at line 56 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef CoreAtomImageType::ConstPointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::CoreAtomImageConstPointer

Definition at line 72 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef CoreAtomImageType::PixelType itk::MedialNodePairCorrespondenceProcess< TSourceImage >::CoreAtomImagePixelType

Definition at line 71 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef CoreAtomImageType::Pointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::CoreAtomImagePointer

Definition at line 69 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef CoreAtomImageType::RegionType itk::MedialNodePairCorrespondenceProcess< TSourceImage >::CoreAtomImageRegionType

Definition at line 70 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef TSourceImage itk::MedialNodePairCorrespondenceProcess< TSourceImage >::CoreAtomImageType

Typedef for core atom image.

Definition at line 65 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef CorrespondenceMatrixType::Pointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::CorrespondenceMatrixPointer

Definition at line 80 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef MatrixResizeableDataObject<double> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::CorrespondenceMatrixType

Typedef for correspondence matrix

Definition at line 79 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef DataObject::Pointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::DataObjectPointer

Smart Pointer type to a DataObject.

Reimplemented from itk::ProcessObject.

Definition at line 59 of file itkMedialNodePairCorrespondenceProcess.h.

typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray [inherited]

STL Array of SmartPointers to DataObjects

Definition at line 103 of file itkProcessObject.h.

typedef DataObjectPointerArray::size_type itk::ProcessObject::DataObjectPointerArraySizeType [inherited]

Size type of an std::vector

Definition at line 112 of file itkProcessObject.h.

template<typename TSourceImage>

typedef CorrespondenceDataStructure<NodeType,2>::Pointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::DataStructurePointerType

Definition at line 85 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef CorrespondenceDataStructure<NodeType,2> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::DataStructureType

Definition at line 84 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef DistanceMatrixType::Pointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::DistanceMatrixPointer

Definition at line 76 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef MatrixResizeableDataObject<double> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::DistanceMatrixType

Typedef for distance matrix.

Definition at line 75 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef CorrespondenceDataStructureIterator<DataStructureType> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::IteratorType

Definition at line 86 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef BloxCoreAtomPixel<itkGetStaticConstMacro(NDimensions)> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::MedialNodeType

Typedef for medial nodes.

Definition at line 95 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef CorrespondingMedialNodeClique<itkGetStaticConstMacro(NDimensions),2> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::NodeType

Typedef for correspondence data structure. (output)

Definition at line 83 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef SmartPointer<Self> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::Pointer

Reimplemented from itk::ProcessObject.

Definition at line 55 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef Point<double, itkGetStaticConstMacro(NDimensions)> itk::MedialNodePairCorrespondenceProcess< TSourceImage >::PositionType

The type used to store the position of the BloxPixel.

Definition at line 98 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef MedialNodePairCorrespondenceProcess itk::MedialNodePairCorrespondenceProcess< TSourceImage >::Self

Standard class typedefs

Reimplemented from itk::ProcessObject.

Definition at line 53 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

typedef ProcessObject itk::MedialNodePairCorrespondenceProcess< TSourceImage >::Superclass

Reimplemented from itk::ProcessObject.

Definition at line 54 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

itk::MedialNodePairCorrespondenceProcess< TSourceImage >::MedialNodePairCorrespondenceProcess ( ) [protected]

template<typename TSourceImage>

virtual itk::MedialNodePairCorrespondenceProcess< TSourceImage >::~MedialNodePairCorrespondenceProcess ( ) [inline, protected, virtual]

Definition at line 136 of file itkMedialNodePairCorrespondenceProcess.h.

virtual void itk::ProcessObject::AbortGenerateDataOff ( ) [virtual, inherited]

virtual void itk::ProcessObject::AbortGenerateDataOn ( ) [virtual, inherited]

Turn on and off the AbortGenerateData flag.

virtual void itk::ProcessObject::AddInput ( DataObject * input ) [protected, virtual, inherited]

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *
	)			const `[inherited]`

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *
	)			`[inherited]`

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

virtual void itk::ProcessObject::AddOutput ( DataObject * output ) [protected, virtual, inherited]

static void itk::LightObject::BreakOnError ( ) [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

virtual void itk::ProcessObject::CacheInputReleaseDataFlags ( ) [protected, virtual, inherited]

Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().

virtual LightObject::Pointer itk::Object::CreateAnother ( ) const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

virtual void itk::Object::DebugOff ( ) const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn ( ) const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete ( ) [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

virtual void itk::ProcessObject::EnlargeOutputRequestedRegion ( DataObject * ) [inline, virtual, inherited]

Give the process object a chance to indictate that it will produce more output than it was requested to produce. For example, many imaging filters must compute the entire output at once or can only produce output in complete slices. Such filters cannot handle smaller requested regions. These filters must provide an implementation of this method, setting the output requested region to the size they will produce. By default, a process object does not modify the size of the output requested region.

Definition at line 225 of file itkProcessObject.h.

template<typename TSourceImage>

void itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GenerateData ( ) [protected, virtual]

Method for forming the Pair Correspondence Data Structure.

Reimplemented from itk::ProcessObject.

Referenced by itk::MedialNodePairCorrespondenceProcess< TSourceImage >::Update().

virtual void itk::ProcessObject::GenerateInputRequestedRegion ( ) [protected, virtual, inherited]

What is the input requested region that is required to produce the output requested region? By default, the largest possible region is always required but this is overridden in many subclasses. For instance, for an image processing filter where an output pixel is a simple function of an input pixel, the input requested region will be set to the output requested region. For an image processing filter where an output pixel is a function of the pixels in a neighborhood of an input pixel, then the input requested region will need to be larger than the output requested region (to avoid introducing artificial boundary conditions). This function should never request an input region that is outside the the input largest possible region (i.e. implementations of this method should crop the input requested region at the boundaries of the input largest possible region).

virtual void itk::ProcessObject::GenerateOutputInformation ( ) [protected, virtual, inherited]

Generate the information decribing the output data. The default implementation of this method will copy information from the input to the output. A filter may override this method if its output will have different information than its input. For instance, a filter that shrinks an image will need to provide an implementation for this method that changes the spacing of the pixels. Such filters should call their superclass' implementation of this method prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.

virtual void itk::ProcessObject::GenerateOutputRequestedRegion ( DataObject * output ) [protected, virtual, inherited]

Given one output whose requested region has been set, how should the requested regions for the remaining outputs of the process object be set? By default, all the outputs are set to the same requested region. If a filter needs to produce different requested regions for each output, for instance an image processing filter producing several outputs at different resolutions, then that filter may override this method and set the requested regions appropriatedly.

Note that a filter producing multiple outputs of different types is required to override this method. The default implementation can only correctly handle multiple outputs of the same type.

Reimplemented in itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::RecursiveMultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::watershed::BoundaryResolver< TPixelType, TDimension >, itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, itk::watershed::Relabeler< TScalarType, TImageDimension >, itk::watershed::Segmenter< TInputImage >, itk::watershed::SegmentTreeGenerator< TScalarType >, itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>, and itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >.

virtual const bool& itk::ProcessObject::GetAbortGenerateData ( ) [virtual, inherited]

Get the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

Command* itk::Object::GetCommand ( unsigned long tag ) [inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

template<typename TSourceImage>

TSourceImage* itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetCoreAtomImageA ( ) [protected]

Methods to get core atom images.

template<typename TSourceImage>

TSourceImage* itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetCoreAtomImageB ( ) [protected]

Methods to get core atom images.

template<typename TSourceImage>

CorrespondenceMatrixType* itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetCorrespondenceMatrix ( ) [protected]

Method to get correspondence matrix.

bool itk::Object::GetDebug ( ) const [inherited]

Get the value of the debug flag.

template<typename TSourceImage>

DistanceMatrixType* itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetDistanceMatrixA ( ) [protected]

Methods to get distance matrices.

template<typename TSourceImage>

DistanceMatrixType* itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetDistanceMatrixB ( ) [protected]

Methods to get distance matrices.

static bool itk::Object::GetGlobalWarningDisplay ( ) [static, inherited]

const DataObject* itk::ProcessObject::GetInput ( unsigned int idx ) const [protected, inherited]

DataObject* itk::ProcessObject::GetInput ( unsigned int idx ) [protected, inherited]

Method used internally for getting an input.

Referenced by itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::GetEquivalencyTable(), itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >::GetInputEquivalencyTable(), itk::watershed::Segmenter< TInputImage >::GetInputImage(), itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>::GetInputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::GetInputImage(), itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >::GetInputSegmentTable(), itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>::GetInputSegmentTree(), itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetLabelInput(), and itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::GetMarkerImage().

DataObjectPointerArray& itk::ProcessObject::GetInputs ( ) [inline, inherited]

Return an array with all the inputs of this process object. This is useful for tracing back in the pipeline to construct graphs etc.

Definition at line 108 of file itkProcessObject.h.

const MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void ) const [inherited]

Returns:: A constant reference to this objects MetaDataDictionary.

MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void ) [inherited]

Returns:: A reference to this objects MetaDataDictionary.

Warning:: This reference may be changed.

virtual unsigned long itk::Object::GetMTime ( ) const [virtual, inherited]

Return this objects modified time.

Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().

MultiThreader* itk::ProcessObject::GetMultiThreader ( ) [inline, inherited]

Return the multithreader used by this class.

Definition at line 284 of file itkProcessObject.h.

template<typename TSourceImage>

virtual const char* itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetNameOfClass ( ) const [virtual]

Run-time type information. (and related methods)

Reimplemented from itk::ProcessObject.

DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfInputs ( ) const [inline, inherited]

Get the size of the input vector. This is merely the size of the input vector, not the number of inputs that have valid DataObject's assigned. Use GetNumberOfValidRequiredInputs() to determine how many inputs are non-null.

Definition at line 118 of file itkProcessObject.h.

template<typename TSourceImage>

int itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetNumberOfNodeBasePairs ( ) [inline]

Get number of node basepairs.

Definition at line 125 of file itkMedialNodePairCorrespondenceProcess.h.

template<typename TSourceImage>

int itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetNumberOfNodePairs ( ) [inline]

Get number of node pairs.

Definition at line 122 of file itkMedialNodePairCorrespondenceProcess.h.

DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfOutputs ( ) const [inline, inherited]

Definition at line 135 of file itkProcessObject.h.

virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredInputs ( ) [protected, virtual, inherited]

virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredOutputs ( ) [protected, virtual, inherited]

virtual const int& itk::ProcessObject::GetNumberOfThreads ( ) [virtual, inherited]

virtual DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfValidRequiredInputs ( ) const [virtual, inherited]

Get the number of valid inputs. This is the number of non-null entries in the input vector in the first NumberOfRequiredInputs slots. This method is used to determine whether the necessary required inputs have been set. Subclasses of ProcessObject may override this implementation if the required inputs are not the first slots in input vector.

Reimplemented in itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField >, and itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.

const DataObject* itk::ProcessObject::GetOutput ( unsigned int idx ) const [protected, inherited]

template<typename TSourceImage>

DataStructureType* itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetOutput ( unsigned int idx )

Method used internally for getting an output.

Reimplemented from itk::ProcessObject.

template<typename TSourceImage>

DataStructureType* itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GetOutput ( void )

Get the image output of this process object.

DataObjectPointerArray& itk::ProcessObject::GetOutputs ( ) [inline, inherited]

Return an array with all the outputs of this process object. This is useful for tracing forward in the pipeline to contruct graphs etc.

Definition at line 133 of file itkProcessObject.h.

virtual const float& itk::ProcessObject::GetProgress ( ) [virtual, inherited]

Get the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution.

virtual int itk::LightObject::GetReferenceCount ( ) const [inline, virtual, inherited]

Gets the reference count on this object.

Definition at line 98 of file itkLightObject.h.

virtual const bool& itk::ProcessObject::GetReleaseDataBeforeUpdateFlag ( ) [virtual, inherited]

virtual bool itk::ProcessObject::GetReleaseDataFlag ( ) const [virtual, inherited]

static void itk::Object::GlobalWarningDisplayOff ( ) [inline, static, inherited]

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

static void itk::Object::GlobalWarningDisplayOn ( ) [inline, static, inherited]

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

bool itk::Object::HasObserver ( const EventObject & event ) const [inherited]

Return true if an observer is registered for this event.

void itk::Object::InvokeEvent ( const EventObject & ) const [inherited]

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

void itk::Object::InvokeEvent ( const EventObject & ) [inherited]

Call Execute on all the Commands observing this event id.

template<typename TSourceImage>

itk::MedialNodePairCorrespondenceProcess< TSourceImage >::itkStaticConstMacro	(	NDimensions	,
		unsigned	int,
		TSourceImage::ImageDimension
	)

Number of dimensions

template<typename TSourceImage>

virtual DataObjectPointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::MakeOutput ( unsigned int idx ) [virtual]

Make a DataObject of the correct type to used as the specified output. Every ProcessObject subclass must be able to create a DataObject that can be used as a specified output. This method is automatically called when DataObject::DisconnectPipeline() is called. DataObject::DisconnectPipeline, disconnects a data object from being an output of its current source. When the data object is disconnected, the ProcessObject needs to construct a replacement output data object so that the ProcessObject is in a valid state. So DataObject::DisconnectPipeline eventually calls ProcessObject::MakeOutput. Note that MakeOutput always returns a itkSmartPointer to a DataObject. ImageSource and MeshSource override this method to create the correct type of image and mesh respectively. If a filter has multiple outputs of different types, then that filter must provide an implementation of MakeOutput().

Reimplemented from itk::ProcessObject.

virtual void itk::Object::Modified ( ) const [virtual, inherited]

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Referenced by itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().

template<typename TSourceImage>

static Pointer itk::MedialNodePairCorrespondenceProcess< TSourceImage >::New ( ) [static]

Method for creation through the object factory.

Reimplemented from itk::Object.

virtual void itk::ProcessObject::PopBackInput ( ) [protected, virtual, inherited]

virtual void itk::ProcessObject::PopFrontInput ( ) [protected, virtual, inherited]

virtual void itk::ProcessObject::PrepareOutputs ( ) [virtual, inherited]

An opportunity to deallocate a ProcessObject's bulk data storage. Some filters may wish to reuse existing bulk data storage to avoid unnecessary deallocation/allocation sequences. The default implementation calls Initialize() on each output. DataObject::Initialize() frees its bulk data by default.

Reimplemented in itk::WatershedImageFilter< TInputImage >.

void itk::LightObject::Print	(	std::ostream &	os,
		Indent	indent = `0`
	)			const `[inherited]`

Cause the object to print itself out.

Referenced by itk::WeakPointer< itk::ProcessObject >::Print().

virtual void itk::LightObject::PrintHeader	(	std::ostream &	os,
		Indent	indent
	)			const `[protected, virtual, inherited]`

bool itk::Object::PrintObservers	(	std::ostream &	os,
		Indent	indent
	)			const `[protected, inherited]`

template<typename TSourceImage>

void itk::MedialNodePairCorrespondenceProcess< TSourceImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)			const `[protected, virtual]`

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ProcessObject.

virtual void itk::LightObject::PrintTrailer	(	std::ostream &	os,
		Indent	indent
	)			const `[protected, virtual, inherited]`

virtual void itk::ProcessObject::PropagateRequestedRegion ( DataObject * output ) [virtual, inherited]

Send the requested region information back up the pipeline (to the filters that preceed this one).

Reimplemented in itk::VTKImageImport< TOutputImage >.

virtual void itk::ProcessObject::PropagateResetPipeline ( ) [protected, virtual, inherited]

Propagate a call to ResetPipeline() up the pipeline. Called only from DataObject.

virtual void itk::ProcessObject::PushBackInput ( const DataObject * input ) [protected, virtual, inherited]

Push/Pop an input of this process object. These methods allow a filter to model its input vector as a queue or stack. These routines may not be appropriate for all filters, especially filters with different types of inputs. These routines follow the semantics of STL.

virtual void itk::ProcessObject::PushFrontInput ( const DataObject * input ) [protected, virtual, inherited]

virtual void itk::Object::Register ( ) const [virtual, inherited]

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOff ( ) [virtual, inherited]

virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOn ( ) [virtual, inherited]

void itk::ProcessObject::ReleaseDataFlagOff ( ) [inline, inherited]

Definition at line 257 of file itkProcessObject.h.

void itk::ProcessObject::ReleaseDataFlagOn ( ) [inline, inherited]

Definition at line 256 of file itkProcessObject.h.

virtual void itk::ProcessObject::ReleaseInputs ( ) [protected, virtual, inherited]

A filter may need to release its input's bulk data after it has finished calculating a new output. The filter may need to release the inputs because the user has turned on the ReleaseDataFlag or it may need to release the inputs because the filter is an "in place" filter and it has overwritten its input with its output data. The implementation here simply checks the ReleaseDataFlag of the inputs. InPlaceImageFilter overrides this method so release the input it has overwritten.

See also:: InPlaceImageFilter::ReleaseInputs()

void itk::Object::RemoveAllObservers ( ) [inherited]

Remove all observers .

virtual void itk::ProcessObject::RemoveInput ( DataObject * input ) [protected, virtual, inherited]

void itk::Object::RemoveObserver ( unsigned long tag ) [inherited]

Remove the observer with this tag value.

virtual void itk::ProcessObject::RemoveOutput ( DataObject * output ) [protected, virtual, inherited]

virtual void itk::ProcessObject::ResetPipeline ( ) [virtual, inherited]

Reset the pipeline. If an exception is thrown during an Update(), the pipeline may be in an inconsistent state. This method clears the internal state of the pipeline so Update() can be called.

virtual void itk::ProcessObject::RestoreInputReleaseDataFlags ( ) [protected, virtual, inherited]

Restore the cached input ReleaseDataFlags.

virtual void itk::ProcessObject::SetAbortGenerateData ( bool _arg ) [virtual, inherited]

Set the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

template<typename TSourceImage>

void itk::MedialNodePairCorrespondenceProcess< TSourceImage >::SetCoreAtomImageA ( const CoreAtomImageType * CoreAtomImageA )

Set the first core atom image.

template<typename TSourceImage>

void itk::MedialNodePairCorrespondenceProcess< TSourceImage >::SetCoreAtomImageB ( const CoreAtomImageType * CoreAtomImageB )

Set the second core atom image.

template<typename TSourceImage>

void itk::MedialNodePairCorrespondenceProcess< TSourceImage >::SetCorrespondenceMatrix ( const CorrespondenceMatrixType * CorrespondenceMatrix )

Set the correspondence matrix.

void itk::Object::SetDebug ( bool debugFlag ) const [inherited]

Set the value of the debug flag. A non-zero value turns debugging on.

template<typename TSourceImage>

void itk::MedialNodePairCorrespondenceProcess< TSourceImage >::SetDistanceMatrixA ( const DistanceMatrixType * DistanceMatrixA )

Set the first distance matrix.

template<typename TSourceImage>

void itk::MedialNodePairCorrespondenceProcess< TSourceImage >::SetDistanceMatrixB ( const DistanceMatrixType * DistanceMatrixB )

Set the second distance matrix.

static void itk::Object::SetGlobalWarningDisplay ( bool flag ) [static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary & rhs ) [inherited]

Returns:: Set the MetaDataDictionary

virtual void itk::ProcessObject::SetNthInput	(	unsigned int	num,
		DataObject *	input
	)			`[protected, virtual, inherited]`

Protected methods for setting inputs. Subclasses make use of them for setting input.

Referenced by itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetBoundaryA(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetBoundaryB(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetEquivalencyTable(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetFeatureImage(), itk::NarrowBandLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetFeatureImage(), itk::WatershedImageFilter< TInputImage >::SetInput(), itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >::SetInputEquivalencyTable(), itk::watershed::Segmenter< TInputImage >::SetInputImage(), itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>::SetInputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetInputImage(), itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >::SetInputSegmentTable(), itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>::SetInputSegmentTree(), itk::DiffusionTensor3DReconstructionImageFilter< TReferenceImagePixelType, TGradientImagePixelType, TTensorPixelType >::SetReferenceImage(), and itk::ChangeInformationImageFilter< TInputImage >::SetReferenceImage().

virtual void itk::ProcessObject::SetNthOutput	(	unsigned int	num,
		DataObject *	output
	)			`[protected, virtual, inherited]`

Protected methods for setting outputs. Subclasses make use of them for getting output.

Referenced by itk::watershed::BoundaryResolver< TPixelType, TDimension >::BoundaryResolver(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::EquivalenceRelabeler(), itk::watershed::Segmenter< TInputImage >::SetBoundary(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetEquivalencyTable(), itk::watershed::Segmenter< TInputImage >::SetOutputImage(), itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>::SetOutputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetOutputImage(), and itk::watershed::Segmenter< TInputImage >::SetSegmentTable().

void itk::ProcessObject::SetNumberOfInputs ( unsigned int num ) [protected, inherited]

Called to allocate the input array. Copies old inputs.

void itk::ProcessObject::SetNumberOfOutputs ( unsigned int num ) [protected, inherited]

Called to allocate the output array. Copies old outputs.

virtual void itk::ProcessObject::SetNumberOfRequiredInputs ( unsigned int _arg ) [protected, virtual, inherited]

virtual void itk::ProcessObject::SetNumberOfRequiredOutputs ( unsigned int _arg ) [protected, virtual, inherited]

virtual void itk::ProcessObject::SetNumberOfThreads ( int _arg ) [virtual, inherited]

Get/Set the number of threads to create when executing.

virtual void itk::ProcessObject::SetProgress ( float _arg ) [virtual, inherited]

Set the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution. The ProgressEvent is NOT invoked.

virtual void itk::Object::SetReferenceCount ( int ) [virtual, inherited]

Sets the reference count (use with care)

Reimplemented from itk::LightObject.

virtual void itk::ProcessObject::SetReleaseDataBeforeUpdateFlag ( bool _arg ) [virtual, inherited]

Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released/reallocated during an Update(). In limited memory scenarios, a user may want to force the elements of a pipeline to release any bulk data that is going to be regenerated anyway during an Update() in order to control peak memory allocation. Note that this flag is different from the ReleaseDataFlag. ReleaseDataFlag manages the deallocation of a ProcessObject's bulk output data once that data has been consumed by a downstream ProcessObject. The ReleaseDataBeforeUpdateFlag manages the deallocation/reallocation of bulk data during a pipeline update to control peak memory utilization. Default value is on.

virtual void itk::ProcessObject::SetReleaseDataFlag ( bool flag ) [virtual, inherited]

Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released after being used by a downstream ProcessObject. Default value is off. Another options for controlling memory utilization is the ReleaseDataBeforeUpdateFlag.

virtual void itk::Object::UnRegister ( ) const [virtual, inherited]

Decrease the reference count (release by another object).

Reimplemented from itk::LightObject.

template<typename TSourceImage>

virtual void itk::MedialNodePairCorrespondenceProcess< TSourceImage >::Update ( ) [inline, virtual]

Bring this filter up-to-date. Update() checks modified times against last execution times, and re-executes objects if necessary. A side effect of this method is that the whole pipeline may execute in order to bring this filter up-to-date. This method updates the currently prescribed requested region. If no requested region has been set on the output, then the requested region will be set to the largest possible region. Once the requested region is set, Update() will make sure the specified requested region is up-to-date. This is a confusing side effect to users who are just calling Update() on a filter. A first call to Update() will cause the largest possible region to be updated. A second call to Update() will update that same region. If a modification to the upstream pipeline cause a filter to have a different largest possible region, this second call to Update() will not cause the output requested region to be reset to the new largest possible region. Instead, the output requested region will be the same as the last time Update() was called. To have a filter always to produce its largest possible region, users should call UpdateLargestPossibleRegion() instead.

Reimplemented from itk::ProcessObject.

Definition at line 130 of file itkMedialNodePairCorrespondenceProcess.h.

References itk::MedialNodePairCorrespondenceProcess< TSourceImage >::GenerateData().

virtual void itk::ProcessObject::UpdateLargestPossibleRegion ( ) [virtual, inherited]

Like Update(), but sets the output requested region to the largest possible region for the output. This is the method users should call if they want the entire dataset to be processed. If a user wants to update the same output region as a previous call to Update() or a previous call to UpdateLargestPossibleRegion(), then they should call the method Update().

virtual void itk::ProcessObject::UpdateOutputData ( DataObject * output ) [virtual, inherited]

Actually generate new output

Reimplemented in itk::StreamingImageFilter< TInputImage, TOutputImage >.

virtual void itk::ProcessObject::UpdateOutputInformation ( ) [virtual, inherited]

Update the information decribing the output data. This method transverses up the pipeline gathering modified time information. On the way back down the pipeline, this method calls GenerateOutputInformation() to set any necessary information about the output data objects. For instance, a filter that shrinks an image will need to provide an implementation for GenerateOutputInformation() that changes the spacing of the pixels. Such filters should call their superclass' implementation of GenerateOutputInformation prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.

Reimplemented in itk::watershed::Segmenter< TInputImage >, and itk::VTKImageImport< TOutputImage >.

void itk::ProcessObject::UpdateProgress ( float amount ) [inherited]

Update the progress of the process object.

Sets the Progress ivar to amount and invokes any observers for the ProgressEvent. The parameter amount should be in [0,1] and is the cumulative (not incremental) progress.

TimeStamp itk::ProcessObject::m_OutputInformationMTime [protected, inherited]

Time when GenerateOutputInformation was last called.

Definition at line 431 of file itkProcessObject.h.

volatile int itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects.

Definition at line 119 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count

Definition at line 122 of file itkLightObject.h.

bool itk::ProcessObject::m_Updating [protected, inherited]

This flag indicates when the pipeline is executing. It prevents infinite recursion when pipelines have loops.

Definition at line 428 of file itkProcessObject.h.


Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef CoreAtomImageType::ConstPointer	CoreAtomImageConstPointer
typedef CoreAtomImageType::PixelType	CoreAtomImagePixelType
typedef CoreAtomImageType::Pointer	CoreAtomImagePointer
typedef CoreAtomImageType::RegionType	CoreAtomImageRegionType
typedef TSourceImage	CoreAtomImageType
typedef CorrespondenceMatrixType::Pointer	CorrespondenceMatrixPointer
typedef MatrixResizeableDataObject< double >	CorrespondenceMatrixType
typedef DataObject::Pointer	DataObjectPointer
typedef std::vector< DataObjectPointer >	DataObjectPointerArray
typedef DataObjectPointerArray::size_type	DataObjectPointerArraySizeType
typedef DistanceMatrixType::Pointer	DistanceMatrixPointer
typedef MatrixResizeableDataObject< double >	DistanceMatrixType
typedef BloxCoreAtomPixel< itkGetStaticConstMacro(NDimensions)>	MedialNodeType
typedef SmartPointer< Self >	Pointer
typedef Point< double, itkGetStaticConstMacro(NDimensions)>	PositionType
typedef MedialNodePairCorrespondenceProcess	Self
typedef ProcessObject	Superclass

typedef BinaryMedialNodeMetric< itkGetStaticConstMacro(NDimensions)>::Pointer	BinaryMetricPointer
typedef BinaryMedialNodeMetric< itkGetStaticConstMacro(NDimensions)>	BinaryMetricType

typedef CorrespondenceDataStructure< NodeType, 2 >::Pointer	DataStructurePointerType
typedef CorrespondenceDataStructure< NodeType, 2 >	DataStructureType
typedef CorrespondenceDataStructureIterator< DataStructureType >	IteratorType
typedef CorrespondingMedialNodeClique< itkGetStaticConstMacro(NDimensions), 2 >	NodeType
Public Member Functions
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual LightObject::Pointer	CreateAnother () const
virtual void	DebugOff () const
virtual void	DebugOn () const
virtual void	Delete ()
virtual void	EnlargeOutputRequestedRegion (DataObject *)
virtual const bool &	GetAbortGenerateData ()
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
DataObjectPointerArray &	GetInputs ()
const MetaDataDictionary &	GetMetaDataDictionary (void) const
MetaDataDictionary &	GetMetaDataDictionary (void)
virtual unsigned long	GetMTime () const
MultiThreader *	GetMultiThreader ()
virtual const char *	GetNameOfClass () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
int	GetNumberOfNodeBasePairs ()
int	GetNumberOfNodePairs ()
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
virtual const float &	GetProgress ()
virtual int	GetReferenceCount () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &) const
void	InvokeEvent (const EventObject &)
	itkStaticConstMacro (NDimensions, unsigned int, TSourceImage::ImageDimension)
virtual DataObjectPointer	MakeOutput (unsigned int idx)
virtual void	Modified () const
virtual void	PrepareOutputs ()
void	Print (std::ostream &os, Indent indent=0) const
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
void	SetCoreAtomImageA (const CoreAtomImageType *CoreAtomImageA)
void	SetCoreAtomImageB (const CoreAtomImageType *CoreAtomImageB)
void	SetCorrespondenceMatrix (const CorrespondenceMatrixType *CorrespondenceMatrix)
void	SetDebug (bool debugFlag) const
void	SetDistanceMatrixA (const DistanceMatrixType *DistanceMatrixA)
void	SetDistanceMatrixB (const DistanceMatrixType *DistanceMatrixB)
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetProgress (float _arg)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float amount)

unsigned long	AddObserver (const EventObject &event, Command *) const
unsigned long	AddObserver (const EventObject &event, Command *)

DataObjectPointerArraySizeType	GetNumberOfOutputs () const
DataObjectPointerArray &	GetOutputs ()

virtual const int &	GetNumberOfThreads ()
virtual void	SetNumberOfThreads (int _arg)

DataStructureType *	GetOutput (unsigned int idx)
DataStructureType *	GetOutput (void)

virtual const bool &	GetReleaseDataBeforeUpdateFlag ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)

virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOff ()
void	ReleaseDataFlagOn ()
virtual void	SetReleaseDataFlag (bool flag)
Static Public Member Functions
static void	BreakOnError ()
static Pointer	New ()

static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static void	SetGlobalWarningDisplay (bool flag)
Protected Member Functions
virtual void	CacheInputReleaseDataFlags ()
void	GenerateData ()
virtual void	GenerateInputRequestedRegion ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
CorrespondenceMatrixType *	GetCorrespondenceMatrix ()
	MedialNodePairCorrespondenceProcess ()
bool	PrintObservers (std::ostream &os, Indent indent) const
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	PropagateResetPipeline ()
virtual void	ReleaseInputs ()
virtual void	RestoreInputReleaseDataFlags ()
void	SetNumberOfInputs (unsigned int num)
void	SetNumberOfOutputs (unsigned int num)
virtual	~MedialNodePairCorrespondenceProcess ()

virtual void	AddInput (DataObject *input)
virtual const unsigned int &	GetNumberOfRequiredInputs ()
virtual void	RemoveInput (DataObject *input)
virtual void	SetNthInput (unsigned int num, DataObject *input)
virtual void	SetNumberOfRequiredInputs (unsigned int _arg)

virtual void	AddOutput (DataObject *output)
virtual const unsigned int &	GetNumberOfRequiredOutputs ()
virtual void	RemoveOutput (DataObject *output)
virtual void	SetNthOutput (unsigned int num, DataObject *output)
virtual void	SetNumberOfRequiredOutputs (unsigned int _arg)

TSourceImage *	GetCoreAtomImageA ()
TSourceImage *	GetCoreAtomImageB ()

DistanceMatrixType *	GetDistanceMatrixA ()
DistanceMatrixType *	GetDistanceMatrixB ()

const DataObject *	GetInput (unsigned int idx) const
DataObject *	GetInput (unsigned int idx)

const DataObject *	GetOutput (unsigned int idx) const

virtual void	PopBackInput ()
virtual void	PopFrontInput ()
virtual void	PushBackInput (const DataObject *input)
virtual void	PushFrontInput (const DataObject *input)

virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
Protected Attributes
TimeStamp	m_OutputInformationMTime
volatile int	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock
bool	m_Updating

itk::MedialNodePairCorrespondenceProcess< TSourceImage > Class Template Reference

Detailed Description

template<typename TSourceImage>
class itk::MedialNodePairCorrespondenceProcess< TSourceImage >

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

itk::MedialNodePairCorrespondenceProcess< TSourceImage > Class Template Reference

Detailed Description

template<typename TSourceImage> class itk::MedialNodePairCorrespondenceProcess< TSourceImage >

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<typename TSourceImage>
class itk::MedialNodePairCorrespondenceProcess< TSourceImage >