#include <itkMRIBiasFieldCorrectionFilter.h>
Inheritance diagram for itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >:
This is a wrapping class which provides interfaces between images, the bias field, the internal energy function (CompositeValleyFunction), and the Optimizer.
This class is templated over the type of the input image (TImage), the image mask (which tells which pixels in the input image should be included for energy value calculation), and the bias field (TBiasField).
Definition at line 48 of file itkMRIBiasFieldCorrectionFilter.h.
Public Types | |
| typedef TBiasField | BiasFieldType |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef Superclass::DerivativeType | DerivativeType |
| typedef ImageType::PixelType | ImageElementType |
| typedef ImageType::IndexType | ImageIndexType |
| typedef ImageType::Pointer | ImagePointer |
| typedef ImageType::RegionType | ImageRegionType |
| typedef TImage | ImageType |
| typedef CompositeValleyFunction | InternalEnergyFunction |
| typedef MaskType::PixelType | MaskElementType |
| typedef MaskType::Pointer | MaskPointer |
| typedef TImageMask | MaskType |
| typedef Superclass::MeasureType | MeasureType |
| typedef Superclass::ParametersType | ParametersType |
| typedef double | ParametersValueType |
| typedef SmartPointer< Self > | Pointer |
| typedef unsigned int | SamplingFactorType [SpaceDimension] |
| typedef MRIBiasEnergyFunction | Self |
| typedef SingleValuedCostFunction | Superclass |
Public Member Functions | |
| virtual LightObject::Pointer | CreateAnother () const |
| virtual void | DebugOff () const |
| virtual void | DebugOn () const |
| virtual void | Delete () |
| Command * | GetCommand (unsigned long tag) |
| bool | GetDebug () const |
| virtual void | GetDerivative (const ParametersType ¶meters, DerivativeType &derivative) const=0 |
| void | GetDerivative (const ParametersType &, DerivativeType &) const |
| double | GetEnergy0 (double diff) |
| const MetaDataDictionary & | GetMetaDataDictionary (void) const |
| MetaDataDictionary & | GetMetaDataDictionary (void) |
| virtual unsigned long | GetMTime () const |
| virtual const char * | GetNameOfClass () const |
| unsigned int | GetNumberOfParameters (void) const |
| virtual int | GetReferenceCount () const |
| virtual MeasureType | GetValue (const ParametersType ¶meters) const=0 |
| MeasureType | GetValue (const ParametersType ¶meters) const |
| bool | HasObserver (const EventObject &event) const |
| void | InitializeDistributions (Array< double > classMeans, Array< double > classSigmas) |
| void | InvokeEvent (const EventObject &) const |
| void | InvokeEvent (const EventObject &) |
| itkStaticConstMacro (SpaceDimension, unsigned int, 3) | |
| virtual void | Modified () const |
| void | Print (std::ostream &os, Indent indent=0) const |
| virtual void | Register () const |
| void | RemoveAllObservers () |
| void | RemoveObserver (unsigned long tag) |
| void | SetBiasField (BiasFieldType *bias) |
| void | SetDebug (bool debugFlag) const |
| virtual void | SetImage (ImageType *_arg) |
| virtual void | SetMask (MaskType *_arg) |
| void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
| virtual void | SetReferenceCount (int) |
| virtual void | SetRegion (ImageRegionType _arg) |
| virtual void | UnRegister () const |
| unsigned long | AddObserver (const EventObject &event, Command *) const |
| unsigned long | AddObserver (const EventObject &event, Command *) |
| virtual void | GetValueAndDerivative (const ParametersType ¶meters, MeasureType &value, DerivativeType &derivative) const |
| void | SetSamplingFactors (SamplingFactorType factor) |
Static Public Member Functions | |
| static void | BreakOnError () |
| static Pointer | New () |
| static bool | GetGlobalWarningDisplay () |
| static void | GlobalWarningDisplayOff () |
| static void | GlobalWarningDisplayOn () |
| static void | SetGlobalWarningDisplay (bool flag) |
Protected Types | |
| typedef int | InternalReferenceCountType |
Protected Member Functions | |
| MRIBiasEnergyFunction () | |
| bool | PrintObservers (std::ostream &os, Indent indent) const |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| virtual | ~MRIBiasEnergyFunction () |
| virtual void | PrintHeader (std::ostream &os, Indent indent) const |
| virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
Protected Attributes | |
| InternalReferenceCountType | m_ReferenceCount |
| SimpleFastMutexLock | m_ReferenceCountLock |
| typedef TBiasField itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::BiasFieldType |
Bias field type definition.
Definition at line 74 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef SmartPointer<const Self> itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::ConstPointer |
Reimplemented from itk::SingleValuedCostFunction.
Definition at line 55 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef Superclass::DerivativeType itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::DerivativeType |
Not used, but expected by SingleValuedNonLinearOptimizer class.
Reimplemented from itk::SingleValuedCostFunction.
Definition at line 81 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef ImageType::PixelType itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::ImageElementType |
Definition at line 68 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef ImageType::IndexType itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::ImageIndexType |
Definition at line 70 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef ImageType::Pointer itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::ImagePointer |
Definition at line 66 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef ImageType::RegionType itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::ImageRegionType |
Definition at line 71 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef TImage itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::ImageType |
Image related type definitions.
Definition at line 61 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef CompositeValleyFunction itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::InternalEnergyFunction |
The type of the internal energy function.
Definition at line 89 of file itkMRIBiasFieldCorrectionFilter.h.
typedef int itk::LightObject::InternalReferenceCountType [protected, inherited] |
Define the type of the reference count according to the target. This allows the use of atomic operations
Definition at line 139 of file itkLightObject.h.
| typedef MaskType::PixelType itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::MaskElementType |
Definition at line 69 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef MaskType::Pointer itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::MaskPointer |
Definition at line 67 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef TImageMask itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::MaskType |
Definition at line 65 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef Superclass::MeasureType itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::MeasureType |
The cost value type.
Reimplemented from itk::SingleValuedCostFunction.
Definition at line 84 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef Superclass::ParametersType itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::ParametersType |
Parameters type for optimizier (coefficients type for bias field estimate).
Reimplemented from itk::SingleValuedCostFunction.
Definition at line 78 of file itkMRIBiasFieldCorrectionFilter.h.
typedef double itk::CostFunction::ParametersValueType [inherited] |
ParametersType typedef. It defines a position in the optimization search space.
Definition at line 46 of file itkCostFunction.h.
| typedef SmartPointer<Self> itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::Pointer |
Reimplemented from itk::SingleValuedCostFunction.
Definition at line 54 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef unsigned int itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::SamplingFactorType[SpaceDimension] |
The type of the sampling factors
Definition at line 92 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef MRIBiasEnergyFunction itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::Self |
Standard class typedefs.
Reimplemented from itk::SingleValuedCostFunction.
Definition at line 52 of file itkMRIBiasFieldCorrectionFilter.h.
| typedef SingleValuedCostFunction itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::Superclass |
Reimplemented from itk::SingleValuedCostFunction.
Definition at line 53 of file itkMRIBiasFieldCorrectionFilter.h.
| itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::MRIBiasEnergyFunction | ( | ) | [protected] |
Constructor:
| virtual itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::~MRIBiasEnergyFunction | ( | ) | [protected, virtual] |
Destructor:
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | const [inherited] |
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| static void itk::LightObject::BreakOnError | ( | ) | [static, inherited] |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
| virtual LightObject::Pointer itk::Object::CreateAnother | ( | ) | const [virtual, inherited] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
| virtual void itk::Object::DebugOff | ( | ) | const [virtual, inherited] |
Turn debugging output off.
| virtual void itk::Object::DebugOn | ( | ) | const [virtual, inherited] |
Turn debugging output on.
| virtual void itk::LightObject::Delete | ( | ) | [virtual, inherited] |
Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
| Command* itk::Object::GetCommand | ( | unsigned long | tag | ) | [inherited] |
Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
| bool itk::Object::GetDebug | ( | ) | const [inherited] |
Get the value of the debug flag.
| virtual void itk::SingleValuedCostFunction::GetDerivative | ( | const ParametersType & | parameters, | |
| DerivativeType & | derivative | |||
| ) | const [pure virtual, inherited] |
This method returns the derivative of the cost function corresponding to the specified parameters.
Implemented in itk::Statistics::GoodnessOfFitMixtureModelCostFunction< TInputSample >.
| void itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::GetDerivative | ( | const ParametersType & | , | |
| DerivativeType & | ||||
| ) | const [inline] |
Dummy implementation to confirm to the SingleValuedCostFunction interfaces. It is pure virtual in the superclass
Definition at line 131 of file itkMRIBiasFieldCorrectionFilter.h.
| double itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::GetEnergy0 | ( | double | diff | ) | [inline] |
Get an energy value for the intensity difference between a pixel and its corresponding bias.
Definition at line 120 of file itkMRIBiasFieldCorrectionFilter.h.
| static bool itk::Object::GetGlobalWarningDisplay | ( | ) | [static, inherited] |
| const MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | const [inherited] |
| MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | [inherited] |
| virtual unsigned long itk::Object::GetMTime | ( | ) | const [virtual, inherited] |
Return this objects modified time.
Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.
Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().
| virtual const char* itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::SingleValuedCostFunction.
| unsigned int itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::GetNumberOfParameters | ( | void | ) | const [virtual] |
Return the number of parameters required to compute this cost function. This method MUST be overloaded by derived classes.
Implements itk::CostFunction.
| virtual int itk::LightObject::GetReferenceCount | ( | ) | const [inline, virtual, inherited] |
Gets the reference count on this object.
Definition at line 106 of file itkLightObject.h.
| virtual MeasureType itk::SingleValuedCostFunction::GetValue | ( | const ParametersType & | parameters | ) | const [pure virtual, inherited] |
This method returns the value of the cost function corresponding to the specified parameters.
Implemented in itk::Statistics::GoodnessOfFitMixtureModelCostFunction< TInputSample >.
| MeasureType itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::GetValue | ( | const ParametersType & | parameters | ) | const |
Gets the total energy value of an image or a slice using the given parameters.
| virtual void itk::SingleValuedCostFunction::GetValueAndDerivative | ( | const ParametersType & | parameters, | |
| MeasureType & | value, | |||
| DerivativeType & | derivative | |||
| ) | const [inline, virtual, inherited] |
This method returns the value and derivative of the cost function corresponding to the specified parameters
Definition at line 71 of file itkSingleValuedCostFunction.h.
| static void itk::Object::GlobalWarningDisplayOff | ( | ) | [inline, static, inherited] |
| static void itk::Object::GlobalWarningDisplayOn | ( | ) | [inline, static, inherited] |
| bool itk::Object::HasObserver | ( | const EventObject & | event | ) | const [inherited] |
Return true if an observer is registered for this event.
| void itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::InitializeDistributions | ( | Array< double > | classMeans, | |
| Array< double > | classSigmas | |||
| ) |
Set Mean and Sigma for the normal distributions
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | const [inherited] |
Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | [inherited] |
Call Execute on all the Commands observing this event id.
| itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::itkStaticConstMacro | ( | SpaceDimension | , | |
| unsigned | int, | |||
| 3 | ||||
| ) |
| virtual void itk::Object::Modified | ( | ) | const [virtual, inherited] |
Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.
Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >.
Referenced by itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().
| static Pointer itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::Object.
| void itk::LightObject::Print | ( | std::ostream & | os, | |
| Indent | indent = 0 | |||
| ) | const [inherited] |
Cause the object to print itself out.
Referenced by itk::WeakPointer< itk::ProcessObject >::Print().
| virtual void itk::LightObject::PrintHeader | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| bool itk::Object::PrintObservers | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, inherited] |
| void itk::CostFunction::PrintSelf | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::Object.
Reimplemented in itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >, itk::EuclideanDistancePointMetric< TFixedPointSet, TMovingPointSet, TDistanceMap >, itk::GradientDifferenceImageToImageMetric< TFixedImage, TMovingImage >, itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >, itk::ImageToImageMetric< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectMetric< TFixedImage, TMovingSpatialObject >, itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >, itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >, itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >, itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >, itk::MeanReciprocalSquareDifferenceImageToImageMetric< TFixedImage, TMovingImage >, itk::MeanReciprocalSquareDifferencePointSetToImageMetric< TFixedPointSet, TMovingImage >, itk::MutualInformationImageToImageMetric< TFixedImage, TMovingImage >, itk::NormalizedCorrelationImageToImageMetric< TFixedImage, TMovingImage >, itk::NormalizedCorrelationPointSetToImageMetric< TFixedPointSet, TMovingImage >, itk::PointSetToImageMetric< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >, itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >, itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >, itk::CumulativeGaussianCostFunction, itk::Statistics::GoodnessOfFitMixtureModelCostFunction< TInputSample >, itk::ImageToImageMetric< TFixedImage, TMovingImage >, itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >, itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >, and itk::MeanSquaresImageToImageMetric< TFixedImage, TMovingImage >.
| virtual void itk::LightObject::PrintTrailer | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| virtual void itk::Object::Register | ( | ) | const [virtual, inherited] |
Increase the reference count (mark as used by another object).
Reimplemented from itk::LightObject.
| void itk::Object::RemoveAllObservers | ( | ) | [inherited] |
Remove all observers .
| void itk::Object::RemoveObserver | ( | unsigned long | tag | ) | [inherited] |
Remove the observer with this tag value.
| void itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::SetBiasField | ( | BiasFieldType * | bias | ) | [inline] |
Sets the BiasField object.
Definition at line 104 of file itkMRIBiasFieldCorrectionFilter.h.
| void itk::Object::SetDebug | ( | bool | debugFlag | ) | const [inherited] |
Set the value of the debug flag. A non-zero value turns debugging on.
| static void itk::Object::SetGlobalWarningDisplay | ( | bool | flag | ) | [static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().
| virtual void itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::SetImage | ( | ImageType * | _arg | ) | [virtual] |
Specify the input image.
| virtual void itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::SetMask | ( | MaskType * | _arg | ) | [virtual] |
Specify the input mask image.
| void itk::Object::SetMetaDataDictionary | ( | const MetaDataDictionary & | rhs | ) | [inherited] |
| virtual void itk::Object::SetReferenceCount | ( | int | ) | [virtual, inherited] |
Sets the reference count (use with care)
Reimplemented from itk::LightObject.
| virtual void itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::SetRegion | ( | ImageRegionType | _arg | ) | [virtual] |
Set the image region which will be included for energy calculation.
| void itk::MRIBiasEnergyFunction< TImage, TImageMask, TBiasField >::SetSamplingFactors | ( | SamplingFactorType | factor | ) | [inline] |
Sets the sampling factors of the energy function in each direction. Default is 1 in each dimension
Definition at line 109 of file itkMRIBiasFieldCorrectionFilter.h.
| virtual void itk::Object::UnRegister | ( | ) | const [virtual, inherited] |
Decrease the reference count (release by another object).
Reimplemented from itk::LightObject.
InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited] |
Number of uses of this object by other objects.
Definition at line 144 of file itkLightObject.h.
SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited] |
Mutex lock to protect modification to the reference count
Definition at line 147 of file itkLightObject.h.
1.5.1 written by Dimitri van Heesch,
© 1997-2000