ITK  4.1.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Attributes | Protected Member Functions | Protected Attributes | Private Member Functions
itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder > Class Template Reference
Module ITKTransform

#include <itkBSplineBaseTransform.h>

+ Inheritance diagram for itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >:
+ Collaboration diagram for itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >:

List of all members.

Public Types

typedef FixedArray
< ImagePointer, NDimensions > 		CoefficientImageArray
typedef SmartPointer< const Self > ConstPointer
typedef
WeightsFunctionType::ContinuousIndexType 		ContinuousIndexType
typedef Superclass::DerivativeType DerivativeType
typedef ImageType::DirectionType DirectionType
typedef ImageType::Pointer ImagePointer
typedef Image
< ParametersValueType,
itkGetStaticConstMacro(SpaceDimension)> 		ImageType
typedef RegionType::IndexType IndexType
typedef vnl_vector_fixed
< TScalarType, SpaceDimension > 		InputVnlVectorType
typedef Superclass::JacobianType JacobianType
typedef SizeType MeshSizeType
typedef
Superclass::NumberOfParametersType 		NumberOfParametersType
typedef ImageType::PointType OriginType
typedef vnl_vector_fixed
< TScalarType, SpaceDimension > 		OutputVnlVectorType
typedef Array< unsigned long > ParameterIndexArrayType
typedef Superclass::ParametersType ParametersType
typedef ParametersType::ValueType ParametersValueType
typedef ImageType::SpacingType PhysicalDimensionsType
typedef ImageType::PixelType PixelType
typedef SmartPointer< Self > Pointer
typedef ImageRegion
< itkGetStaticConstMacro(SpaceDimension)> 		RegionType
typedef Superclass::ScalarType ScalarType
typedef BSplineBaseTransform Self
typedef RegionType::SizeType SizeType
typedef ImageType::SpacingType SpacingType
typedef Transform< TScalarType,
NDimensions, NDimensions > 		Superclass
typedef
BSplineInterpolationWeightFunction
< ScalarType,
itkGetStaticConstMacro(SpaceDimension),
itkGetStaticConstMacro(SplineOrder)> 		WeightsFunctionType
typedef
WeightsFunctionType::WeightsType 		WeightsType
typedef Vector< TScalarType,
itkGetStaticConstMacro(SpaceDimension)> 		InputVectorType
typedef Vector< TScalarType,
itkGetStaticConstMacro(SpaceDimension)> 		OutputVectorType
typedef CovariantVector
< TScalarType,
itkGetStaticConstMacro(SpaceDimension)> 		InputCovariantVectorType
typedef CovariantVector
< TScalarType,
itkGetStaticConstMacro(SpaceDimension)> 		OutputCovariantVectorType
typedef Point< TScalarType,
itkGetStaticConstMacro(SpaceDimension)> 		InputPointType
typedef Point< TScalarType,
itkGetStaticConstMacro(SpaceDimension)> 		OutputPointType

Public Member Functions

void ComputeJacobianFromBSplineWeightsWithRespectToPosition (const InputPointType &, WeightsType &, ParameterIndexArrayType &) const
virtual void ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const =0
virtual void ComputeJacobianWithRespectToPosition (const InputPointType &, JacobianType &) const
const CoefficientImageArray GetCoefficientImages () const
virtual const ParametersType & GetFixedParameters () const
virtual const char * GetNameOfClass () const
unsigned int GetNumberOfAffectedWeights () const
virtual NumberOfParametersType GetNumberOfParameters () const =0
virtual NumberOfParametersType GetNumberOfParametersPerDimension () const =0
unsigned long GetNumberOfWeights () const
virtual const ParametersType & GetParameters () const
virtual bool IsLinear () const
 itkCloneMacro (Self)
virtual void SetCoefficientImages (const CoefficientImageArray &images)=0
void SetIdentity ()
void SetParameters (const ParametersType &parameters)
void SetParametersByValue (const ParametersType &parameters)
OutputPointType TransformPoint (const InputPointType &point) const
virtual void TransformPoint (const InputPointType &inputPoint, OutputPointType &outputPoint, WeightsType &weights, ParameterIndexArrayType &indices, bool &inside) const =0
virtual void UpdateTransformParameters (DerivativeType &update, TScalarType factor=1.0)
virtual void SetFixedParameters (const ParametersType &parameters)=0
virtual OutputVectorType TransformVector (const InputVectorType &) const
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &) const
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &) const

Static Public Attributes

static const unsigned int SpaceDimension = NDimensions
static const unsigned int SplineOrder = VSplineOrder

Protected Member Functions

 BSplineBaseTransform ()
virtual WeightsFunctionType * GetWeightsFunction ()
virtual bool InsideValidRegion (ContinuousIndexType &) const =0
void PrintSelf (std::ostream &os, Indent indent) const
virtual void SetCoefficientImageInformationFromFixedParameters ()=0
void SetFixedParametersFromTransformDomainInformation () const
virtual void SetFixedParametersGridDirectionFromTransformDomainInformation () const =0
virtual void SetFixedParametersGridOriginFromTransformDomainInformation () const =0
virtual void SetFixedParametersGridSizeFromTransformDomainInformation () const =0
virtual void SetFixedParametersGridSpacingFromTransformDomainInformation () const =0
virtual void SetWeightsFunction (WeightsFunctionType *_arg)
void WrapAsImages ()
virtual ~BSplineBaseTransform ()

Protected Attributes

CoefficientImageArray m_CoefficientImages
const ParametersType * m_InputParametersPointer
ParametersType m_InternalParametersBuffer
WeightsFunctionType::Pointer m_WeightsFunction

Private Member Functions

CoefficientImageArray ArrayOfImagePointerGeneratorHelper () const
 BSplineBaseTransform (const Self &)
void operator= (const Self &)

Detailed Description

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
class itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >

A base class with common elements of BSplineTransform and BSplineDeformableTransform.

Definition at line 35 of file itkBSplineBaseTransform.h.

Member Typedef Documentation

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef FixedArray<ImagePointer, NDimensions> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::CoefficientImageArray

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 172 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef SmartPointer<const Self> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ConstPointer

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 43 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef WeightsFunctionType::ContinuousIndexType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ContinuousIndexType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 225 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Superclass::DerivativeType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::DerivativeType

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Definition at line 193 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef ImageType::DirectionType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::DirectionType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 213 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef ImageType::Pointer itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ImagePointer

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 171 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Image<ParametersValueType, itkGetStaticConstMacro( SpaceDimension )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ImageType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 170 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef RegionType::IndexType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::IndexType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 210 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef CovariantVector<TScalarType, itkGetStaticConstMacro( SpaceDimension )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::InputCovariantVectorType

Standard covariant vector type for this class.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 75 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Point<TScalarType, itkGetStaticConstMacro( SpaceDimension )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::InputPointType

Standard coordinate point type for this class.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 84 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Vector<TScalarType, itkGetStaticConstMacro( SpaceDimension )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::InputVectorType

Standard vector type for this class.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 70 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef vnl_vector_fixed<TScalarType, SpaceDimension> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::InputVnlVectorType

Standard vnl_vector type for this class.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 80 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Superclass::JacobianType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::JacobianType

Standard Jacobian container.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 64 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef SizeType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::MeshSizeType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 310 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Superclass::NumberOfParametersType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::NumberOfParametersType

The number of parameters defininig this transform.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 67 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef ImageType::PointType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::OriginType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 214 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef CovariantVector<TScalarType, itkGetStaticConstMacro( SpaceDimension )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::OutputCovariantVectorType

Standard covariant vector type for this class.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 76 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Point<TScalarType, itkGetStaticConstMacro( SpaceDimension )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::OutputPointType

Standard coordinate point type for this class.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 85 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Vector<TScalarType, itkGetStaticConstMacro( SpaceDimension )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::OutputVectorType

Standard vector type for this class.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 71 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef vnl_vector_fixed<TScalarType, SpaceDimension> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::OutputVnlVectorType

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 81 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Array<unsigned long> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ParameterIndexArrayType

Parameter index array type.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 228 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Superclass::ParametersType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ParametersType

Standard parameters container.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 61 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef ParametersType::ValueType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ParametersValueType

Parameters as SpaceDimension number of images.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 169 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef ImageType::SpacingType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::PhysicalDimensionsType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 307 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef ImageType::PixelType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::PixelType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 308 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef SmartPointer<Self> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::Pointer

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 42 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef ImageRegion<itkGetStaticConstMacro( SpaceDimension )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::RegionType

Typedefs for specifying the extent of the grid.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 208 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Superclass::ScalarType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ScalarType

Standard scalar type for this class.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 58 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef BSplineBaseTransform itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::Self

Standard class typedefs.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 40 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef RegionType::SizeType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SizeType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 211 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef ImageType::SpacingType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SpacingType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 212 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef Transform<TScalarType, NDimensions, NDimensions> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::Superclass

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 41 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef BSplineInterpolationWeightFunction<ScalarType, itkGetStaticConstMacro( SpaceDimension ), itkGetStaticConstMacro( SplineOrder )> itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::WeightsFunctionType

Interpolation weights function type.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 222 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
typedef WeightsFunctionType::WeightsType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::WeightsType

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 224 of file itkBSplineBaseTransform.h.

Constructor & Destructor Documentation

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::BSplineBaseTransform ( ) [protected]
template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::~BSplineBaseTransform ( ) [protected, virtual]
template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::BSplineBaseTransform ( const Self &  ) [private]

Member Function Documentation

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
CoefficientImageArray itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ArrayOfImagePointerGeneratorHelper ( ) const [private]
template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ComputeJacobianFromBSplineWeightsWithRespectToPosition ( const InputPointType &  ,
WeightsType &  ,
ParameterIndexArrayType &   
) const

Get Jacobian at a point. A very specialized function just for BSplines

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ComputeJacobianWithRespectToParameters ( const InputPointType &  ,
JacobianType &   
) const [pure virtual]

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::ComputeJacobianWithRespectToPosition ( const InputPointType &  ,
JacobianType &   
) const [inline, virtual]

Definition at line 283 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
const CoefficientImageArray itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetCoefficientImages ( ) const [inline]

Get the array of coefficient images.

Definition at line 188 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual const ParametersType& itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetFixedParameters ( ) const [virtual]

Get the Transformation Fixed Parameters.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual const char* itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetNameOfClass ( ) const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
unsigned int itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetNumberOfAffectedWeights ( ) const
template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual NumberOfParametersType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetNumberOfParameters ( ) const [pure virtual]

Return the number of parameters that completely define the Transfom

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual NumberOfParametersType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetNumberOfParametersPerDimension ( ) const [pure virtual]

Return the number of parameters per dimension

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
unsigned long itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetNumberOfWeights ( ) const [inline]

Get number of weights.

Definition at line 242 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual const ParametersType& itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetParameters ( ) const [virtual]

Get the Transformation Parameters.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual WeightsFunctionType* itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::GetWeightsFunction ( ) [protected, virtual]

Allow subclasses to access and manipulate the weights function.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual bool itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::InsideValidRegion ( ContinuousIndexType &  ) const [protected, pure virtual]

Check if a continuous index is inside the valid region.

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual bool itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::IsLinear ( ) const [inline, virtual]

Indicates that this transform is linear. That is, given two points P and Q, and scalar coefficients a and b, then

T( a*P + b*Q ) = a * T(P) + b * T(Q)

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Definition at line 300 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::itkCloneMacro ( Self  )

implement type-specific clone method

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::operator= ( const Self &  ) [private]

Mutex lock to protect modification to the reference count

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Print contents of an BSplineBaseTransform.

Reimplemented from itk::Object.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetCoefficientImageInformationFromFixedParameters ( ) [protected, pure virtual]

Construct control point grid size from transform domain information

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetCoefficientImages ( const CoefficientImageArray &  images) [pure virtual]

Set the array of coefficient images.

This is an alternative API for setting the BSpline coefficients as an array of SpaceDimension images. The fixed parameters are taken from the first image. It is assumed that the buffered region of all the subsequent images are the same as the first image. Note that no error checking is done.

Warning: use either the SetParameters() or SetCoefficientImages() API. Mixing the two modes may results in unexpected results.

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetFixedParameters ( const ParametersType &  parameters) [pure virtual]

This method sets the fixed parameters of the transform. For a BSpline deformation transform, the fixed parameters are the following: grid size, grid origin, grid spacing, and grid direction. However, all of these are set via the much more intuitive SetTransformDomainXXX() functions

The fixed parameters are the three times the size of the templated dimensions. This function has the effect of make the following non- existing functional calls: transform->SetGridSpacing( spacing ); transform->SetGridOrigin( origin ); transform->SetGridDirection( direction ); transform->SetGridRegion( bsplineRegion );

With recent updates to this transform, however, all these parameters are set indirectly by setting the transform domain parameters unless the user sets them with SetFixedParameters().

This function was added to allow the transform to work with the itkTransformReader/Writer I/O filters.

Implements itk::Transform< TScalarType, NDimensions, NDimensions >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetFixedParametersFromTransformDomainInformation ( ) const [protected]

Construct control point grid from transform domain information

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetFixedParametersGridDirectionFromTransformDomainInformation ( ) const [protected, pure virtual]

Construct control point grid direction from transform domain information

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetFixedParametersGridOriginFromTransformDomainInformation ( ) const [protected, pure virtual]

Construct control point grid origin from transform domain information

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetFixedParametersGridSizeFromTransformDomainInformation ( ) const [protected, pure virtual]

Construct control point grid size from transform domain information

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetFixedParametersGridSpacingFromTransformDomainInformation ( ) const [protected, pure virtual]

Construct control point grid spacing from transform domain information

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetIdentity ( )

This method can ONLY be invoked AFTER calling SetParameters(). This restriction is due to the fact that the BSplineBaseTransform does not copy the array of parameters internally, instead it keeps a pointer to the user-provided array of parameters. This method is also in violation of the const-correctness of the parameters since the parameter array has been passed to the transform on a 'const' basis but the values get modified when the user invokes SetIdentity().

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetParameters ( const ParametersType &  parameters) [virtual]

This method sets the parameters of the transform. For a BSpline deformation transform, the parameters are the BSpline coefficients on a sparse grid.

The parameters are N number of N-D grid of coefficients. Each N-D grid is represented as a flat array of scalars (in the same configuration as an itk::Image). The N arrays are then concatenated to form one parameter array.

For efficiency, this transform does not make a copy of the parameters. It only keeps a pointer to the input parameters. It assumes that the memory is managed by the caller. Use SetParametersByValue to force the transform to call copy the parameters.

This method wraps each grid as itk::Image's using the user specified fixed parameters. NOTE: The transform domain must be set first.

Implements itk::Transform< TScalarType, NDimensions, NDimensions >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetParametersByValue ( const ParametersType &  parameters) [virtual]

This method sets the parameters of the transform. For a BSpline deformation transform, the parameters are the BSpline coefficients on a sparse grid.

The parameters are N number of N-D grid of coefficients. Each N-D grid is represented as a flat array of doubles (in the same configuration as an itk::Image). The N arrays are then concatenated to form one parameter array.

This methods makes a copy of the parameters while for efficiency the SetParameters method does not.

This method wraps each grid as itk::Image's using the user specified fixed parameters. NOTE: The fixed parameters must be set first.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SetWeightsFunction ( WeightsFunctionType *  _arg) [protected, virtual]

Allow subclasses to access and manipulate the weights function.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual OutputCovariantVectorType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::TransformCovariantVector ( const InputCovariantVectorType &  ) const [inline, virtual]

Method to transform a CovariantVector.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Definition at line 269 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
OutputPointType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::TransformPoint ( const InputPointType &  point) const [virtual]

Transform points by a BSpline deformable transformation.

Implements itk::Transform< TScalarType, NDimensions, NDimensions >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::TransformPoint ( const InputPointType &  inputPoint,
OutputPointType &  outputPoint,
WeightsType &  weights,
ParameterIndexArrayType &  indices,
bool &  inside 
) const [pure virtual]

Transform points by a BSpline deformable transformation. On return, weights contains the interpolation weights used to compute the deformation and indices of the x (zeroth) dimension coefficient parameters in the support region used to compute the deformation. Parameter indices for the i-th dimension can be obtained by adding ( i * this->GetNumberOfParametersPerDimension() ) to the indices array.

Implemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual OutputVectorType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::TransformVector ( const InputVectorType &  ) const [inline, virtual]

Method to transform a vector.

Reimplemented from itk::Transform< TScalarType, NDimensions, NDimensions >.

Definition at line 250 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual OutputVnlVectorType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::TransformVector ( const InputVnlVectorType &  ) const [inline, virtual]

Method to transform a vnl_vector - not applicable for this type of transform

Definition at line 259 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
virtual void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::UpdateTransformParameters ( DerivativeType &  update,
TScalarType  factor = 1.0 
) [virtual]

Update the transform's parameters by the adding values in update to current parameter values. We assume update is of the same length as Parameters. Throw exception otherwise. factor is a scalar multiplier for each value in update. SetParameters is called at the end of this method, to allow transforms to perform any required operations on the update parameters, typically a converion to member variables for use in TransformPoint. Derived classes should override to provide specialized behavior.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
void itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::WrapAsImages ( ) [protected]

Wrap flat array into images of coefficients.

Member Data Documentation

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
CoefficientImageArray itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::m_CoefficientImages [protected]

Array of images representing the B-spline coefficients in each dimension wrapped from the flat parameters in m_InternalParametersBuffer

Definition at line 365 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
const ParametersType* itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::m_InputParametersPointer [protected]

Keep a pointer to the input parameters.

Definition at line 368 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
ParametersType itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::m_InternalParametersBuffer [protected]

Internal parameters buffer.

Definition at line 371 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
WeightsFunctionType::Pointer itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::m_WeightsFunction [protected]

Pointer to function used to compute Bspline interpolation weights.

Definition at line 375 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
const unsigned int itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SpaceDimension = NDimensions [static]

Dimension of the domain space.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 49 of file itkBSplineBaseTransform.h.

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
const unsigned int itk::BSplineBaseTransform< TScalarType, NDimensions, VSplineOrder >::SplineOrder = VSplineOrder [static]

The BSpline order.

Reimplemented in itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >, and itk::BSplineTransform< TScalarType, NDimensions, VSplineOrder >.

Definition at line 52 of file itkBSplineBaseTransform.h.

The documentation for this class was generated from the following file:
Generated on Thu Mar 1 2012 23:41:07 for ITK by doxygen 1.7.6.1