ITK
4.1.0
Insight Segmentation and Registration Toolkit
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#include <itkFastSymmetricForcesDemonsRegistrationFunction.h>
This class provides a substantially faster implementation of the symmetric demons registration force. Speed is improved by keeping a deformed copy of the moving image for gradient evaluation.
Definition at line 46 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef SmartPointer< const Self > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ConstPointer |
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 58 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::CoordRepType |
Interpolator type.
Definition at line 99 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef CovariantVector< double, itkGetStaticConstMacro(ImageDimension) > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::CovariantVectorType |
Covariant vector type.
Definition at line 110 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef LinearInterpolateImageFunction< MovingImageType, CoordRepType > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::DefaultInterpolatorType |
Definition at line 103 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::DisplacementFieldType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldType |
Deformation field type.
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 79 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::DisplacementFieldTypePointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldTypePointer |
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 81 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef ConstNeighborhoodIterator< FixedImageType > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FixedImageNeighborhoodIteratorType [protected] |
FixedImage image neighborhood iterator type.
Definition at line 189 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::FixedImagePointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FixedImagePointer |
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 73 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::FixedImageType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FixedImageType |
FixedImage image type.
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 72 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::FloatOffsetType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FloatOffsetType |
A floating point offset from an image grid location. Used for interpolation among grid values in a neighborhood.
Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.
Definition at line 95 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef GradientCalculatorType::Pointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GradientCalculatorPointer |
Definition at line 114 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef CentralDifferenceImageFunction< FixedImageType > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GradientCalculatorType |
Gradient calculator types.
Definition at line 113 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef FixedImageType::IndexType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::IndexType |
Definition at line 74 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef InterpolatorType::Pointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::InterpolatorPointer |
Definition at line 101 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef InterpolateImageFunction< MovingImageType, CoordRepType > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::InterpolatorType |
Definition at line 100 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef MovingGradientCalculatorType::Pointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingGradientCalculatorPointer |
Definition at line 117 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef CentralDifferenceImageFunction< MovingImageType > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingGradientCalculatorType |
Definition at line 116 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::MovingImagePointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImagePointer |
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 69 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::MovingImageType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImageType |
MovingImage image type.
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 65 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::NeighborhoodType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::NeighborhoodType |
The type of data structure that is passed to this function object to evaluate at a pixel that does not lie on a data set boundary.
Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.
Definition at line 94 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::PixelType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::PixelType |
Inherit some enums from the superclass.
Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.
Definition at line 92 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef SmartPointer< Self > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Pointer |
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 57 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef InterpolatorType::PointType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::PointType |
Definition at line 102 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::RadiusType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::RadiusType |
Neighborhood radius type
Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.
Definition at line 93 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef FastSymmetricForcesDemonsRegistrationFunction itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Self |
Standard class typedefs.
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 53 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef FixedImageType::SizeType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SizeType |
Definition at line 75 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef FixedImageType::SpacingType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SpacingType |
Definition at line 76 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Superclass |
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
Definition at line 56 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef Superclass::TimeStepType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::TimeStepType |
Define the TimeStepType to always be double.
Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.
Definition at line 96 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef WarperType::Pointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::WarperPointer |
Definition at line 107 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
typedef WarpImageFilter< MovingImageType, MovingImageType, DisplacementFieldType > itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::WarperType |
Warper type
Definition at line 106 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FastSymmetricForcesDemonsRegistrationFunction | ( | ) | [protected] |
itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::~FastSymmetricForcesDemonsRegistrationFunction | ( | ) | [inline, protected] |
Definition at line 185 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FastSymmetricForcesDemonsRegistrationFunction | ( | const Self & | ) | [private] |
virtual TimeStepType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ComputeGlobalTimeStep | ( | void * | ) | const [inline, virtual] |
This class uses a constant timestep of 1.
Implements itk::FiniteDifferenceFunction< TDisplacementField >.
Definition at line 132 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
virtual PixelType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ComputeUpdate | ( | const NeighborhoodType & | neighborhood, |
void * | globalData, | ||
const FloatOffsetType & | offset = FloatOffsetType(0.0) |
||
) | [virtual] |
This method is called by a finite difference solver image filter at each pixel that does not lie on a data set boundary
Implements itk::FiniteDifferenceFunction< TDisplacementField >.
virtual::itk::LightObject::Pointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::CreateAnother | ( | void | ) | const [virtual] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
virtual void* itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetGlobalDataPointer | ( | ) | const [inline, virtual] |
Return a pointer to a global data structure that is passed to this object from the solver at each calculation.
Implements itk::FiniteDifferenceFunction< TDisplacementField >.
Definition at line 139 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
References itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GlobalDataStruct::m_NumberOfPixelsProcessed, itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GlobalDataStruct::m_SumOfSquaredChange, and itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GlobalDataStruct::m_SumOfSquaredDifference.
virtual double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetIntensityDifferenceThreshold | ( | ) | const [virtual] |
virtual double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMetric | ( | ) | const [inline, virtual] |
Get the metric value. The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the the overlapping region between the two images.
Definition at line 164 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
InterpolatorType* itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMovingImageInterpolator | ( | void | ) | [inline] |
Get the moving image interpolator.
Definition at line 126 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
virtual const char* itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
virtual const double& itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetRMSChange | ( | ) | const [inline, virtual] |
Get the rms change in deformation field.
Definition at line 170 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
virtual void itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::InitializeIteration | ( | ) | [virtual] |
Set the object's state before each iteration.
Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.
static Pointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::LightObject.
void itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::operator= | ( | const Self & | ) | [private] |
Mutex lock to protect modification to the reference count
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
void itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::PrintSelf | ( | std::ostream & | os, |
Indent | indent | ||
) | const [protected, virtual] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >.
virtual void itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ReleaseGlobalDataPointer | ( | void * | GlobalData | ) | const [virtual] |
Release memory for global data structure.
Implements itk::FiniteDifferenceFunction< TDisplacementField >.
virtual void itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetIntensityDifferenceThreshold | ( | double | ) | [virtual] |
Set/Get the threshold below which the absolute difference of intensity yields a match. When the intensities match between a moving and fixed image pixel, the update vector (for that iteration) will be the zero vector. Default is 0.001.
void itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMovingImageInterpolator | ( | InterpolatorType * | ptr | ) | [inline] |
Set the moving image interpolator.
Definition at line 120 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
const unsigned int itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ImageDimension = Superclass::ImageDimension [static] |
Inherit some enums from the superclass.
Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.
Definition at line 89 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_DenominatorThreshold [private] |
Threshold below which the denominator term is considered zero.
Definition at line 225 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
GradientCalculatorPointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_FixedImageGradientCalculator [private] |
Function to compute derivatives of the fixed image.
Definition at line 210 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_IntensityDifferenceThreshold [private] |
Threshold below which two intensity value are assumed to match.
Definition at line 228 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_Metric [mutable, private] |
The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the the overlapping region between the two images.
Definition at line 233 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
SimpleFastMutexLock itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MetricCalculationLock [mutable, private] |
Mutex lock to protect modification to metric.
Definition at line 240 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
InterpolatorPointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImageInterpolator [private] |
Function to interpolate the moving image.
Definition at line 216 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
WarperPointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImageWarper [private] |
Filter to warp moving image for fast gradient computation.
Definition at line 219 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_Normalizer [private] |
Cache fixed image information.
Definition at line 207 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
SizeValueType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_NumberOfPixelsProcessed [mutable, private] |
Definition at line 235 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_RMSChange [mutable, private] |
Definition at line 236 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_SumOfSquaredChange [mutable, private] |
Definition at line 237 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
double itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_SumOfSquaredDifference [mutable, private] |
Definition at line 234 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
TimeStepType itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_TimeStep [private] |
The global timestep.
Definition at line 222 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.
MovingGradientCalculatorPointer itk::FastSymmetricForcesDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_WarpedMovingImageGradientCalculator [private] |
Function to compute derivatives of the fixed image.
Definition at line 213 of file itkFastSymmetricForcesDemonsRegistrationFunction.h.