ITK  4.1.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Private Member Functions | Private Attributes
itk::FreeSurferBinaryMeshIO Class Reference

#include <itkFreeSurferBinaryMeshIO.h>

+ Inheritance diagram for itk::FreeSurferBinaryMeshIO:
+ Collaboration diagram for itk::FreeSurferBinaryMeshIO:

List of all members.

Public Types

typedef SmartPointer< const SelfConstPointer
typedef SmartPointer< SelfPointer
typedef FreeSurferBinaryMeshIO Self
typedef Superclass::SizeValueType SizeValueType
typedef
Superclass::StreamOffsetType 
StreamOffsetType
typedef MeshIOBase Superclass

Public Member Functions

virtual bool CanReadFile (const char *FileNameToRead)
virtual bool CanWriteFile (const char *FileNameToWrite)
virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual const char * GetNameOfClass () const
virtual void ReadCellData (void *buffer)
virtual void ReadCells (void *buffer)
virtual void ReadMeshInformation ()
virtual void ReadPointData (void *buffer)
virtual void ReadPoints (void *buffer)
virtual void Write ()
virtual void WriteCellData (void *buffer)
virtual void WriteCells (void *buffer)
virtual void WriteMeshInformation ()
virtual void WritePointData (void *buffer)
virtual void WritePoints (void *buffer)

Static Public Member Functions

static Pointer New ()

Protected Member Functions

void CloseFile ()
 FreeSurferBinaryMeshIO ()
void OpenFile ()
void PrintSelf (std::ostream &os, Indent indent) const
template<typename TInput , typename TOutput >
void ReadCellsBuffer (TInput *input, TOutput *output)
template<typename T >
void WriteCells (T *buffer, std::ofstream &outputFile)
template<typename T >
void WritePointData (T *buffer, std::ofstream &outputFile)
template<typename T >
void WritePoints (T *buffer, std::ofstream &outputFile)
virtual ~FreeSurferBinaryMeshIO ()

Private Member Functions

 FreeSurferBinaryMeshIO (const Self &)
void operator= (const Self &)

Private Attributes

StreamOffsetType m_FilePosition
itk::uint32_t m_FileTypeIdentifier
std::ifstream m_InputFile

Detailed Description

This class defins how to read Freesurfer binary surface file format. To use IO factory, define the suffix as *.fsb.

Definition at line 37 of file itkFreeSurferBinaryMeshIO.h.


Member Typedef Documentation

Reimplemented from itk::MeshIOBase.

Definition at line 43 of file itkFreeSurferBinaryMeshIO.h.

Reimplemented from itk::MeshIOBase.

Definition at line 44 of file itkFreeSurferBinaryMeshIO.h.

Standard class typedefs.

Reimplemented from itk::MeshIOBase.

Definition at line 41 of file itkFreeSurferBinaryMeshIO.h.

Reimplemented from itk::MeshIOBase.

Definition at line 46 of file itkFreeSurferBinaryMeshIO.h.

Type for representing size of bytes, and or positions along a file

Reimplemented from itk::MeshIOBase.

Definition at line 47 of file itkFreeSurferBinaryMeshIO.h.

Reimplemented from itk::MeshIOBase.

Definition at line 42 of file itkFreeSurferBinaryMeshIO.h.


Constructor & Destructor Documentation

virtual itk::FreeSurferBinaryMeshIO::~FreeSurferBinaryMeshIO ( ) [inline, protected, virtual]

Definition at line 169 of file itkFreeSurferBinaryMeshIO.h.


Member Function Documentation

virtual bool itk::FreeSurferBinaryMeshIO::CanReadFile ( const char *  FileNameToRead) [virtual]

Determine if the file can be read with this MeshIO implementation.

Parameters:
FileNameToReadThe name of the file to test for reading.
Postcondition:
Sets classes MeshIOBase::m_FileName variable to be FileNameToWrite
Returns:
Returns true if this MeshIO can read the file specified.

Implements itk::MeshIOBase.

virtual bool itk::FreeSurferBinaryMeshIO::CanWriteFile ( const char *  FileNameToWrite) [virtual]

Determine if the file can be written with this MeshIO implementation.

Parameters:
FileNameToWriteThe name of the file to test for writing.
Postcondition:
Sets classes MeshIOBase::m_FileName variable to be FileNameToWrite
Returns:
Returns true if this MeshIO can write the file specified.

Implements itk::MeshIOBase.

virtual::itk::LightObject::Pointer itk::FreeSurferBinaryMeshIO::CreateAnother ( void  ) const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightProcessObject.

virtual const char* itk::FreeSurferBinaryMeshIO::GetNameOfClass ( ) const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::MeshIOBase.

Method for creation through the object factory.

Reimplemented from itk::LightProcessObject.

void itk::FreeSurferBinaryMeshIO::operator= ( const Self ) [private]

This method causes the filter to generate its output.

Reimplemented from itk::MeshIOBase.

void itk::FreeSurferBinaryMeshIO::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::MeshIOBase.

virtual void itk::FreeSurferBinaryMeshIO::ReadCellData ( void *  buffer) [virtual]

Implements itk::MeshIOBase.

virtual void itk::FreeSurferBinaryMeshIO::ReadCells ( void *  buffer) [virtual]

Implements itk::MeshIOBase.

template<typename TInput , typename TOutput >
void itk::FreeSurferBinaryMeshIO::ReadCellsBuffer ( TInput *  input,
TOutput *  output 
) [inline, protected]

Read cells from a data buffer, used when writting mesh

point identifiers start from the third elements, first element is cellType, the second is numberOfPoints.

Reimplemented from itk::MeshIOBase.

Definition at line 135 of file itkFreeSurferBinaryMeshIO.h.

Set the spacing and dimension information for the set filename.

Implements itk::MeshIOBase.

virtual void itk::FreeSurferBinaryMeshIO::ReadPointData ( void *  buffer) [virtual]

Implements itk::MeshIOBase.

virtual void itk::FreeSurferBinaryMeshIO::ReadPoints ( void *  buffer) [virtual]

Reads the data from disk into the memory buffer provided.

Implements itk::MeshIOBase.

virtual void itk::FreeSurferBinaryMeshIO::Write ( ) [virtual]

Implements itk::MeshIOBase.

virtual void itk::FreeSurferBinaryMeshIO::WriteCellData ( void *  buffer) [virtual]

Implements itk::MeshIOBase.

virtual void itk::FreeSurferBinaryMeshIO::WriteCells ( void *  buffer) [virtual]

Implements itk::MeshIOBase.

template<typename T >
void itk::FreeSurferBinaryMeshIO::WriteCells ( T *  buffer,
std::ofstream &  outputFile 
) [inline, protected]

Write cells to utput stream

Definition at line 121 of file itkFreeSurferBinaryMeshIO.h.

References itk::uint32_t.

Set the spacing and dimension information for the set filename.

Implements itk::MeshIOBase.

virtual void itk::FreeSurferBinaryMeshIO::WritePointData ( void *  buffer) [virtual]

Implements itk::MeshIOBase.

template<typename T >
void itk::FreeSurferBinaryMeshIO::WritePointData ( T *  buffer,
std::ofstream &  outputFile 
) [inline, protected]

Write points to output stream

Definition at line 154 of file itkFreeSurferBinaryMeshIO.h.

virtual void itk::FreeSurferBinaryMeshIO::WritePoints ( void *  buffer) [virtual]

Writes the data to disk from the memory buffer provided. Make sure that the IORegions has been set properly.

Implements itk::MeshIOBase.

template<typename T >
void itk::FreeSurferBinaryMeshIO::WritePoints ( T *  buffer,
std::ofstream &  outputFile 
) [inline, protected]

Write points to output stream

Definition at line 103 of file itkFreeSurferBinaryMeshIO.h.


Member Data Documentation

Definition at line 181 of file itkFreeSurferBinaryMeshIO.h.

Definition at line 182 of file itkFreeSurferBinaryMeshIO.h.

Definition at line 183 of file itkFreeSurferBinaryMeshIO.h.


The documentation for this class was generated from the following file: