ITK
4.1.0
Insight Segmentation and Registration Toolkit
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#include <itkGeodesicActiveContourLevelSetFunction.h>
This function is used in GeodesicActiveContourLevelSetImageFilter to segment structures in an image based on a user supplied edge potential map.
GeodesicActiveContourLevelSetFunction is a subclass of the generic LevelSetFunction. It is used to segment structures in an image based on a user supplied edge potential map , which has values close to zero in regions near edges (or high image gradient) and values close to one in regions with relatively constant intensity. Typically, the edge potential map is a function of the gradient, for example:
where is image intensity and is the derivative of Gaussian operator.
The edge potential image is set via the SetFeatureImage() method.
In this function both the propagation term and the curvature spatial modifier term are taken directly from the edge potential image such that:
An advection term is constructed from the negative gradient of the edge potential image.
This term behaves like a doublet attracting the contour to the edges.
This implementation is based on: "Geodesic Active Contours", V. Caselles, R. Kimmel and G. Sapiro. International Journal on Computer Vision, Vol 22, No. 1, pp 61-97, 1997
Definition at line 77 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef SmartPointer< const Self > itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::ConstPointer |
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 86 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef TFeatureImageType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::FeatureImageType |
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 87 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef Superclass::FeatureScalarType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::FeatureScalarType |
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 99 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef Superclass::FloatOffsetType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::FloatOffsetType |
A floating point offset from an image grid location. Used for interpolation among grid values in a neighborhood.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 101 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef Superclass::GlobalDataStruct itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::GlobalDataStruct |
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 103 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef Superclass::ImageType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::ImageType |
Extract some parameters from the superclass.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 93 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef Superclass::NeighborhoodType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::NeighborhoodType |
The type of data structure that is passed to this function object to evaluate at a pixel that does not lie on a data set boundary.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 97 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef SmartPointer< Self > itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::Pointer |
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 85 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef Superclass::RadiusType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::RadiusType |
Neighborhood radius type
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 100 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef Superclass::ScalarValueType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::ScalarValueType |
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 98 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef GeodesicActiveContourLevelSetFunction itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::Self |
Standard class typedefs.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 82 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef SegmentationLevelSetFunction< TImageType, TFeatureImageType > itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::Superclass |
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 84 of file itkGeodesicActiveContourLevelSetFunction.h.
typedef Superclass::VectorImageType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::VectorImageType |
Define an image type for the advection field.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 102 of file itkGeodesicActiveContourLevelSetFunction.h.
itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::GeodesicActiveContourLevelSetFunction | ( | ) | [inline, protected] |
Definition at line 140 of file itkGeodesicActiveContourLevelSetFunction.h.
virtual itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::~GeodesicActiveContourLevelSetFunction | ( | ) | [inline, protected, virtual] |
Definition at line 149 of file itkGeodesicActiveContourLevelSetFunction.h.
itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::GeodesicActiveContourLevelSetFunction | ( | const Self & | ) | [protected] |
virtual void itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::CalculateAdvectionImage | ( | ) | [virtual] |
Compute the advection field from feature image.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
virtual void itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::CalculateSpeedImage | ( | ) | [virtual] |
Compute speed image from feature image.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
virtual::itk::LightObject::Pointer itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::CreateAnother | ( | void | ) | const [virtual] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LevelSetFunction< TImageType >.
virtual ScalarValueType itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::CurvatureSpeed | ( | const NeighborhoodType & | neighborhood, |
const FloatOffsetType & | offset, | ||
GlobalDataStruct * | gd | ||
) | const [inline, virtual] |
The curvature speed is same as the propagation speed.
Reimplemented from itk::LevelSetFunction< TImageType >.
Definition at line 116 of file itkGeodesicActiveContourLevelSetFunction.h.
double itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::GetDerivativeSigma | ( | ) | [inline] |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
Definition at line 126 of file itkGeodesicActiveContourLevelSetFunction.h.
virtual const char* itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods)
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
virtual void itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::Initialize | ( | const RadiusType & | r | ) | [inline, virtual] |
This method creates the appropriate member variable operators for the level-set calculations. The argument to this function is a the radius necessary for performing the level-set calculations.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 130 of file itkGeodesicActiveContourLevelSetFunction.h.
static Pointer itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::LevelSetFunction< TImageType >.
void itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::operator= | ( | const Self & | ) | [protected] |
Laplacean smoothing term
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
void itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::PrintSelf | ( | std::ostream & | os, |
Indent | indent | ||
) | const [inline, protected, virtual] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::LevelSetFunction< TImageType >.
Definition at line 156 of file itkGeodesicActiveContourLevelSetFunction.h.
void itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::SetDerivativeSigma | ( | const double | v | ) | [inline] |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
Definition at line 124 of file itkGeodesicActiveContourLevelSetFunction.h.
const unsigned int itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::ImageDimension = Superclass::ImageDimension [static] |
Extract some parameters from the superclass.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
Definition at line 107 of file itkGeodesicActiveContourLevelSetFunction.h.
double itk::GeodesicActiveContourLevelSetFunction< TImageType, TFeatureImageType >::m_DerivativeSigma [private] |
Definition at line 163 of file itkGeodesicActiveContourLevelSetFunction.h.