#include <itkLabelMapContourOverlayImageFilter.h>

Inheritance diagram for itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >:

Collaboration diagram for itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >:

Public Types
enum	{ PLAIN = 0, CONTOUR = 1, SLICE_CONTOUR = 2 }
enum	{ HIGH_LABEL_ON_TOP = 0, LOW_LABEL_ON_TOP = 1 }
typedef SmartPointer< const Self >	ConstPointer
typedef FeatureImageType::ConstPointer	FeatureImageConstPointer
typedef FeatureImageType::PixelType	FeatureImagePixelType
typedef FeatureImageType::Pointer	FeatureImagePointer
typedef FeatureImageType::RegionType	FeatureImageRegionType
typedef TFeatureImage	FeatureImageType
typedef Functor::LabelOverlayFunctor < FeatureImagePixelType, LabelMapPixelType, OutputImagePixelType >	FunctorType
typedef OutputImageType::IndexType	IndexType
typedef LabelMapType::ConstPointer	LabelMapConstPointer
typedef LabelMapType::PixelType	LabelMapPixelType
typedef LabelMapType::Pointer	LabelMapPointer
typedef LabelMapType::RegionType	LabelMapRegionType
typedef TLabelMap	LabelMapType
typedef LabelMapType::LabelObjectType	LabelObjectType
typedef LabelObjectType::LabelType	LabelType
typedef OutputImageType::ConstPointer	OutputImageConstPointer
typedef OutputImageType::PixelType	OutputImagePixelType
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef TOutputImage	OutputImageType
typedef SmartPointer< Self >	Pointer
typedef OutputImageType::RegionType	RegionType
typedef LabelMapContourOverlayImageFilter	Self
typedef OutputImageType::SizeType	SizeType
typedef LabelMapFilter < TLabelMap, TOutputImage >	Superclass
Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
FeatureImageType *	GetFeatureImage ()
virtual const char *	GetNameOfClass () const
void	SetFeatureImage (TFeatureImage *input)
void	SetInput1 (TLabelMap *input)
void	SetInput2 (TFeatureImage *input)

virtual void	SetOpacity (double _arg)
virtual const double &	GetOpacity ()

virtual void	SetType (int _arg)
virtual const int &	GetType ()

virtual void	SetPriority (int _arg)
virtual const int &	GetPriority ()

virtual void	SetDilationRadius (SizeType _arg)
virtual const SizeType &	GetDilationRadius ()

virtual void	SetContourThickness (SizeType _arg)
virtual const SizeType &	GetContourThickness ()

virtual void	SetSliceDimension (int _arg)
virtual const int &	GetSliceDimension ()
Static Public Member Functions
static Pointer	New ()
Static Public Attributes

static const unsigned int	LabelMapDimension = TLabelMap::ImageDimension
static const unsigned int	OutputImageDimension = TOutputImage::ImageDimension
static const unsigned int	ImageDimension = TOutputImage::ImageDimension
Protected Member Functions
virtual void	BeforeThreadedGenerateData ()
void	EnlargeOutputRequestedRegion (DataObject *)
void	GenerateInputRequestedRegion ()
virtual LabelMapType *	GetLabelMap ()
	LabelMapContourOverlayImageFilter ()
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual void	ThreadedProcessLabelObject (LabelObjectType *labelObject)
	~LabelMapContourOverlayImageFilter ()
Private Member Functions
	LabelMapContourOverlayImageFilter (const Self &)
void	operator= (const Self &)
Private Attributes
Barrier::Pointer	m_Barrier
SizeType	m_ContourThickness
SizeType	m_DilationRadius
double	m_Opacity
int	m_Priority
int	m_SliceDimension
LabelMapPointer	m_TempImage
int	m_Type

Detailed Description

template<class TLabelMap, class TFeatureImage, class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>
class itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >

Apply a colormap to the contours (outlines) of each object in a label map and superimpose it on top of the feature image.

The feature image is typically the image from which the labeling was produced. Use the SetInput function to set the LabelMap, and the SetFeatureImage function to set the feature image.

Apply a colormap to a label map and put it on top of the input image. The set of colors is a good selection of distinct colors. The opacity of the label map can be defined by the user. A background label produce a gray pixel with the same intensity than the input one.

Author:: Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: http://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176

See also:: LabelMapToBinaryImageFilter, LabelMapToLabelImageFilter, LabelMapOverlayImageFilter

Wiki Examples:

All Examples

Color the boundaries of labeled regions in an image

Definition at line 57 of file itkLabelMapContourOverlayImageFilter.h.