#include <itkMRCHeaderObject.h>

Inheritance diagram for itk::MRCHeaderObject:

Collaboration diagram for itk::MRCHeaderObject:

Classes
struct	FeiExtendedHeader
struct	Header
Public Types
enum	{ MRCHEADER_MODE_UINT8 = 0, MRCHEADER_MODE_IN16 = 1, MRCHEADER_MODE_FLOAT = 2, MRCHEADER_MODE_COMPLEX_INT16 = 3, MRCHEADER_MODE_COMPLEX_FLOAT = 4, MRCHEADER_MODE_UINT16 = 6, MRCHEADER_MODE_RGB_BYTE = 16 }
enum	{ MRCHEADER_MAP_X = 1, MRCHEADER_MAP_Y = 2, MRCHEADER_MAP_Z = 3 }
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef MRCHeaderObject	Self
typedef LightObject	Superclass
Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
void	DeepCopy (ConstPointer h)
SizeValueType	GetExtendedHeaderSize (void) const
const Header &	GetHeader () const
SizeValueType	GetHeaderSize (void) const
virtual const char *	GetNameOfClass () const
bool	IsOriginalHeaderBigEndian (void) const
bool	SetExtendedHeader (const void *buffer)
bool	SetHeader (const Header *buffer)
Static Public Member Functions
static Pointer	New ()
Public Attributes
Header	m_Header
Protected Member Functions
	MRCHeaderObject (void)
void	PrintSelf (std::ostream &os, Indent indent) const
void	swapHeader (bool bigEndian)
	~MRCHeaderObject (void)
Private Member Functions
	MRCHeaderObject (const Self &)
void	operator= (const Self &)
Private Attributes
bool	m_BigEndianHeader
FeiExtendedHeader *	m_ExtendedFeiHeader
void *	m_ExtendedHeader
SizeValueType	m_ExtendedHeaderSize

Detailed Description

This class is a light wrapper for a couple of plain old data structures, so that they can be utilized in a MetaDataDictionary.

The class is designed to be intialized from a chuck of bytes that are read in from a file. Verification is performed to ensure that the bytes appear to be the correct format for the headers.

The POD structures a publicly avaible without access methods.

This code was contributed in the Insight Journal paper: "A Streaming IO Base Class and Support for Streaming the MRC and VTK File Format" by Lowekamp B., Chen D. http://www.insight-journal.org/browse/publication/729 http://hdl.handle.net/10380/3171

See also:: MetaDataDictionary

Definition at line 49 of file itkMRCHeaderObject.h.

Member Typedef Documentation

typedef SmartPointer< const Self > itk::MRCHeaderObject::ConstPointer

Reimplemented from itk::LightObject.

Definition at line 57 of file itkMRCHeaderObject.h.

typedef SmartPointer< Self > itk::MRCHeaderObject::Pointer

Reimplemented from itk::LightObject.

Definition at line 56 of file itkMRCHeaderObject.h.

typedef MRCHeaderObject itk::MRCHeaderObject::Self

Standard class typedefs.

Reimplemented from itk::LightObject.

Definition at line 54 of file itkMRCHeaderObject.h.

typedef LightObject itk::MRCHeaderObject::Superclass

Definition at line 55 of file itkMRCHeaderObject.h.

Member Enumeration Documentation

anonymous enum

pixel type enumeration

Enumerator:

MRCHEADER_MODE_UINT8
MRCHEADER_MODE_IN16
MRCHEADER_MODE_FLOAT
MRCHEADER_MODE_COMPLEX_INT16
MRCHEADER_MODE_COMPLEX_FLOAT
MRCHEADER_MODE_UINT16
MRCHEADER_MODE_RGB_BYTE

Definition at line 218 of file itkMRCHeaderObject.h.

anonymous enum

map enumeration

Enumerator:

MRCHEADER_MAP_X
MRCHEADER_MAP_Y
MRCHEADER_MAP_Z

Definition at line 227 of file itkMRCHeaderObject.h.

Constructor & Destructor Documentation

itk::MRCHeaderObject::MRCHeaderObject ( void ) [protected]

itk::MRCHeaderObject::~MRCHeaderObject ( void ) [protected]

itk::MRCHeaderObject::MRCHeaderObject ( const Self & ) [private]

Member Function Documentation

virtual::itk::LightObject::Pointer itk::MRCHeaderObject::CreateAnother ( void ) const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

void itk::MRCHeaderObject::DeepCopy ( ConstPointer h )

SizeValueType itk::MRCHeaderObject::GetExtendedHeaderSize ( void ) const

the expected number of bytes in the extended header, this is only valid after a successful call to SetHeader.

const Header& itk::MRCHeaderObject::GetHeader ( ) const

SizeValueType itk::MRCHeaderObject::GetHeaderSize ( void ) const [inline]

the expected number of bytes in the header

Definition at line 270 of file itkMRCHeaderObject.h.

virtual const char* itk::MRCHeaderObject::GetNameOfClass ( ) const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::LightObject.

bool itk::MRCHeaderObject::IsOriginalHeaderBigEndian ( void ) const

returns true if the original header from SetHeader was big endian.

static Pointer itk::MRCHeaderObject::New ( ) [static]

Method for creation through the object factory.

Reimplemented from itk::LightObject.

void itk::MRCHeaderObject::operator= ( const Self & ) [private]

Mutex lock to protect modification to the reference count

Reimplemented from itk::LightObject.

void itk::MRCHeaderObject::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const `[protected, virtual]`

Prints loads of information from the header

Reimplemented from itk::LightObject.

bool itk::MRCHeaderObject::SetExtendedHeader ( const void * buffer )

After SetHeader is called GetExtendedHeaderSize contains the extected size of the buffer argument. This buffer is expected to be the bytes which follow the header in the file.

The return value indicates if the extended header buffer is valid and known. If false is returned then extended header information is not available.

bool itk::MRCHeaderObject::SetHeader ( const Header * buffer )

Parameters:

buffer is assumed to point to a 1024 block of memory which has the header

The return value indicates if buffer appears valid. If false is returned then the header member varible is in an undefined state.

If the byte order of the header then byte swapping will be performed.

void itk::MRCHeaderObject::swapHeader ( bool bigEndian ) [protected]

Methods to fix the order of a set header