ITK
4.1.0
Insight Segmentation and Registration Toolkit
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#include <itkMeshFileReader.h>
Public Types | |
typedef SmartPointer< const Self > | ConstPointer |
typedef OutputMeshType::CellAutoPointer | OutputCellAutoPointer |
typedef OutputMeshType::CellIdentifier | OutputCellIdentifier |
typedef OutputMeshType::CellPixelType | OutputCellPixelType |
typedef OutputMeshType::CellType | OutputCellType |
typedef OutputMeshType::CoordRepType | OutputCoordRepType |
typedef HexahedronCell < OutputCellType > | OutputHexahedronCellType |
typedef LineCell< OutputCellType > | OutputLineCellType |
typedef TOutputMesh | OutputMeshType |
typedef OutputMeshType::PointIdentifier | OutputPointIdentifier |
typedef OutputMeshType::PixelType | OutputPointPixelType |
typedef OutputMeshType::PointType | OutputPointType |
typedef PolygonCell < OutputCellType > | OutputPolygonCellType |
typedef QuadraticEdgeCell < OutputCellType > | OutputQuadraticEdgeCellType |
typedef QuadraticTriangleCell < OutputCellType > | OutputQuadraticTriangleCellType |
typedef QuadrilateralCell < OutputCellType > | OutputQuadrilateralCellType |
typedef TetrahedronCell < OutputCellType > | OutputTetrahedronCellType |
typedef TriangleCell < OutputCellType > | OutputTriangleCellType |
typedef VertexCell < OutputCellType > | OutputVertexCellType |
typedef SmartPointer< Self > | Pointer |
typedef MeshFileReader | Self |
typedef MeshIOBase::SizeValueType | SizeValueType |
typedef MeshSource< TOutputMesh > | Superclass |
Public Member Functions | |
virtual ::itk::LightObject::Pointer | CreateAnother (void) const |
virtual void | GenerateOutputInformation () |
virtual MeshIOBase * | GetMeshIO () |
virtual const char * | GetNameOfClass () const |
void | ReadCellData () |
template<typename T > | |
void | ReadCells (T *buffer) |
void | ReadPointData () |
template<typename T > | |
void | ReadPoints (T *buffer) |
void | SetMeshIO (MeshIOBase *meshIO) |
virtual void | SetFileName (const char *_arg) |
virtual const char * | GetFileName () const |
Static Public Member Functions | |
static Pointer | New () |
Static Public Attributes | |
static const unsigned int | OutputPointDimension = OutputMeshType::PointDimension |
Protected Member Functions | |
template<typename T > | |
void | ConvertCellPixelBuffer (void *inputData, T *outputData, vcl_size_t numberOfPixels) |
template<typename T > | |
void | ConvertPointPixelBuffer (void *inputData, T *outputData, vcl_size_t numberOfPixels) |
virtual void | GenerateData () |
MeshFileReader () | |
void | PrintSelf (std::ostream &os, Indent indent) const |
void | TestFileExistanceAndReadability () |
~MeshFileReader () | |
Protected Attributes | |
std::string | m_FileName |
MeshIOBase::Pointer | m_MeshIO |
bool | m_UserSpecifiedMeshIO |
Private Member Functions | |
MeshFileReader (const Self &) | |
void | operator= (const Self &) |
Private Attributes | |
std::string | m_ExceptionMessage |
Mesh source that reads mesh data from a single file.
This source object is a general filter to read data from a variety of file formats. It works with a MeshIOBase subclass to actually do the reading of the data. Object factory machinery can be used to automatically create the MeshIOBase, or the MeshIOBase can be manually created and set.
TOutputMesh is the type expected by the external users of the filter. If data stored in the file is stored in a different format then specified by TOutputMesh, than this filter converts data between the file type and the external expected type. The ConvertTraits template argument is used to do the conversion.
A Pluggable factory pattern is used this allows different kinds of readers to be registered (even at run time) without having to modify the code in this class. Normally just setting the FileName with the appropriate suffix is enough to get the reader to instantiate the correct MeshIO and read the file properly. However, some files have no accepted suffix, so you will have to manually create the MeshIO instance of the write type.
Definition at line 100 of file itkMeshFileReader.h.
typedef SmartPointer< const Self > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::ConstPointer |
Reimplemented from itk::MeshSource< TOutputMesh >.
Definition at line 106 of file itkMeshFileReader.h.
typedef OutputMeshType::CellAutoPointer itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputCellAutoPointer |
Definition at line 123 of file itkMeshFileReader.h.
typedef OutputMeshType::CellIdentifier itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputCellIdentifier |
Definition at line 122 of file itkMeshFileReader.h.
typedef OutputMeshType::CellPixelType itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputCellPixelType |
Definition at line 119 of file itkMeshFileReader.h.
typedef OutputMeshType::CellType itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputCellType |
Definition at line 124 of file itkMeshFileReader.h.
typedef OutputMeshType::CoordRepType itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputCoordRepType |
Definition at line 117 of file itkMeshFileReader.h.
typedef HexahedronCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputHexahedronCellType |
Definition at line 132 of file itkMeshFileReader.h.
typedef LineCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputLineCellType |
Definition at line 128 of file itkMeshFileReader.h.
typedef TOutputMesh itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputMeshType |
Define output mesh types
Reimplemented from itk::MeshSource< TOutputMesh >.
Definition at line 113 of file itkMeshFileReader.h.
typedef OutputMeshType::PointIdentifier itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputPointIdentifier |
Definition at line 121 of file itkMeshFileReader.h.
typedef OutputMeshType::PixelType itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputPointPixelType |
Definition at line 118 of file itkMeshFileReader.h.
typedef OutputMeshType::PointType itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputPointType |
Definition at line 120 of file itkMeshFileReader.h.
typedef PolygonCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputPolygonCellType |
Definition at line 130 of file itkMeshFileReader.h.
typedef QuadraticEdgeCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputQuadraticEdgeCellType |
Definition at line 134 of file itkMeshFileReader.h.
typedef QuadraticTriangleCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputQuadraticTriangleCellType |
Definition at line 135 of file itkMeshFileReader.h.
typedef QuadrilateralCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputQuadrilateralCellType |
Definition at line 133 of file itkMeshFileReader.h.
typedef TetrahedronCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputTetrahedronCellType |
Definition at line 131 of file itkMeshFileReader.h.
typedef TriangleCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputTriangleCellType |
Definition at line 129 of file itkMeshFileReader.h.
typedef VertexCell< OutputCellType > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputVertexCellType |
Definition at line 127 of file itkMeshFileReader.h.
typedef SmartPointer< Self > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::Pointer |
Reimplemented from itk::MeshSource< TOutputMesh >.
Definition at line 107 of file itkMeshFileReader.h.
typedef MeshFileReader itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::Self |
Standard class typedefs.
Reimplemented from itk::MeshSource< TOutputMesh >.
Definition at line 104 of file itkMeshFileReader.h.
typedef MeshIOBase::SizeValueType itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::SizeValueType |
Definition at line 125 of file itkMeshFileReader.h.
typedef MeshSource< TOutputMesh > itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::Superclass |
Reimplemented from itk::MeshSource< TOutputMesh >.
Definition at line 105 of file itkMeshFileReader.h.
itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::MeshFileReader | ( | ) | [protected] |
itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::~MeshFileReader | ( | ) | [inline, protected] |
Definition at line 171 of file itkMeshFileReader.h.
itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::MeshFileReader | ( | const Self & | ) | [private] |
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::ConvertCellPixelBuffer | ( | void * | inputData, |
T * | outputData, | ||
vcl_size_t | numberOfPixels | ||
) | [protected] |
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::ConvertPointPixelBuffer | ( | void * | inputData, |
T * | outputData, | ||
vcl_size_t | numberOfPixels | ||
) | [protected] |
Convert a block of pixels from one type to another.
virtual::itk::LightObject::Pointer itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::CreateAnother | ( | void | ) | const [virtual] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::MeshSource< TOutputMesh >.
virtual void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::GenerateData | ( | ) | [protected, virtual] |
Does the real work.
Reimplemented from itk::ProcessObject.
virtual void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::GenerateOutputInformation | ( | ) | [virtual] |
Prepare the allocation of the output mesh during the first back propagation of the pipeline.
Reimplemented from itk::ProcessObject.
virtual const char* itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::GetFileName | ( | ) | const [virtual] |
Specify the file to read. This is forwarded to the IO instance.
virtual MeshIOBase* itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::GetMeshIO | ( | ) | [virtual] |
virtual const char* itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::MeshSource< TOutputMesh >.
static Pointer itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::MeshSource< TOutputMesh >.
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::operator= | ( | const Self & | ) | [private] |
Time when GenerateOutputInformation was last called.
Reimplemented from itk::MeshSource< TOutputMesh >.
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::PrintSelf | ( | std::ostream & | os, |
Indent | indent | ||
) | const [protected, virtual] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::MeshSource< TOutputMesh >.
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::ReadCellData | ( | ) |
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::ReadCells | ( | T * | buffer | ) |
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::ReadPointData | ( | ) |
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::ReadPoints | ( | T * | buffer | ) |
virtual void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::SetFileName | ( | const char * | _arg | ) | [virtual] |
Specify the file to read. This is forwarded to the IO instance.
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::SetMeshIO | ( | MeshIOBase * | meshIO | ) |
Set/Get the MeshIO helper class. Often this is created via the object factory mechanism that determines whether a particular MeshIO can read a certain file. This method provides a way to get the MeshIO instance that is created. Or you can directly specify the MeshIO to use to read a particular file in case the factory mechanism will not work properly (e.g., unknown or unusual extension).
void itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::TestFileExistanceAndReadability | ( | ) | [protected] |
Test whether the given filename exist and it is readable, this is intended to be called before attempting to use MeshIO classes for actually reading the file. If the file doesn't exist or it is not readable, and exception with an approriate message will be thrown.
std::string itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::m_ExceptionMessage [private] |
Definition at line 199 of file itkMeshFileReader.h.
std::string itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::m_FileName [protected] |
Definition at line 194 of file itkMeshFileReader.h.
MeshIOBase::Pointer itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::m_MeshIO [protected] |
Definition at line 191 of file itkMeshFileReader.h.
bool itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::m_UserSpecifiedMeshIO [protected] |
Definition at line 192 of file itkMeshFileReader.h.
const unsigned int itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >::OutputPointDimension = OutputMeshType::PointDimension [static] |
Define output point dimension
Definition at line 138 of file itkMeshFileReader.h.