ITK
4.1.0
Insight Segmentation and Registration Toolkit
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#include <itkRegionBasedLevelSetFunctionSharedData.h>
Helper class used to share data in the ScalarChanAndVeseLevelSetFunction.
This class holds cache data used during the computation of the LevelSet updates.
Based on the paper:
"An active contour model without edges" T. Chan and L. Vese. In Scale-Space Theories in Computer Vision, pages 141-151, 1999.
This code was taken from the Insight Journal paper:
"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes" http://www.insight-journal.org/browse/publication/642 http://hdl.handle.net/10380/3055
That is based on the papers:
"Level Set Segmentation: Active Contours without edge" http://www.insight-journal.org/browse/publication/322 http://hdl.handle.net/1926/1532
and
"Level set segmentation using coupled active surfaces" http://www.insight-journal.org/browse/publication/323 http://hdl.handle.net/1926/1533
Definition at line 68 of file itkRegionBasedLevelSetFunctionSharedData.h.
typedef Vector< float, itkGetStaticConstMacro(ImageDimension) > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::CentroidVectorType |
typedef SmartPointer< const Self > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ConstPointer |
Reimplemented from itk::LightObject.
Reimplemented in itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >, and itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.
Definition at line 75 of file itkRegionBasedLevelSetFunctionSharedData.h.
typedef FeatureImageType::ConstPointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureImageConstPointer |
typedef FeatureImageType::Pointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureImagePointer |
typedef TFeatureImage itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureImageType |
typedef FeatureImageType::IndexType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureIndexType |
typedef FeatureImageType::PixelType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeaturePixelType |
typedef FeatureImageType::PointType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeaturePointType |
typedef FeatureImageType::RegionType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureRegionType |
typedef FeatureImageType::SizeType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureSizeType |
typedef FeatureSizeType::SizeValueType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureSizeValueType |
typedef FeatureImageType::SpacingType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureSpacingType |
typedef InputImageType::ConstPointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputImageConstPointer |
typedef InputImageType::Pointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputImagePointer |
typedef TInputImage itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputImageType |
typedef InputImageType::IndexType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputIndexType |
typedef InputIndexType::IndexValueType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputIndexValueType |
typedef InputImageType::PixelType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputPixelType |
typedef InputImageType::PointType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputPointType |
typedef InputImageType::RegionType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputRegionType |
typedef InputImageType::SizeType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputSizeType |
typedef InputSizeType::SizeValueType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputSizeValueType |
typedef InputImageType::SpacingType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputSpacingType |
typedef TreeType::Pointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::KdTreePointer |
typedef LevelSetDataType::Pointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataPointer |
typedef std::vector< LevelSetDataPointer > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataPointerVector |
typedef LevelSetDataPointerVector::iterator itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataPointerVectorIterator |
typedef TSingleData itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataType |
typedef ListImageType::ConstPointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListImageConstPointer |
typedef ListImageType::Pointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListImagePointer |
typedef Image< ListPixelType, itkGetStaticConstMacro(ImageDimension) > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListImageType |
typedef ListImageType::IndexType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListIndexType |
typedef ListIndexType::IndexValueType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListIndexValueType |
typedef ImageRegionIteratorWithIndex< ListImageType > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListIteratorType |
typedef std::list< unsigned int > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListPixelType |
typedef ListImageType::PointType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListPointType |
typedef ListImageType::RegionType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListRegionType |
typedef ListImageType::SizeType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListSizeType |
typedef ListSizeType::SizeValueType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListSizeValueType |
typedef ListImageType::SpacingType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListSpacingType |
typedef SmartPointer< Self > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Pointer |
Reimplemented from itk::LightObject.
Reimplemented in itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >, and itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.
Definition at line 74 of file itkRegionBasedLevelSetFunctionSharedData.h.
typedef itk::Statistics::ListSample< CentroidVectorType > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SampleType |
typedef RegionBasedLevelSetFunctionSharedData itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Self |
Standard class typedefs.
Reimplemented from itk::LightObject.
Reimplemented in itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >, and itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.
Definition at line 72 of file itkRegionBasedLevelSetFunctionSharedData.h.
typedef LightObject itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Superclass |
typedef itk::Statistics::KdTreeGenerator< SampleType > itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::TreeGeneratorType |
typedef TreeGeneratorType::Pointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::TreePointer |
typedef TreeGeneratorType::KdTreeType itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::TreeType |
itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::RegionBasedLevelSetFunctionSharedData | ( | ) | [inline, protected] |
Definition at line 177 of file itkRegionBasedLevelSetFunctionSharedData.h.
itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::~RegionBasedLevelSetFunctionSharedData | ( | ) | [inline, protected] |
Definition at line 178 of file itkRegionBasedLevelSetFunctionSharedData.h.
itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::RegionBasedLevelSetFunctionSharedData | ( | const Self & | ) | [private] |
void itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::AllocateListImage | ( | const FeatureImageType * | featureImage | ) | [inline] |
void itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::CreateHeavisideFunctionOfLevelSetImage | ( | const unsigned int & | j, |
const InputImageType * | image | ||
) | [inline] |
Definition at line 150 of file itkRegionBasedLevelSetFunctionSharedData.h.
virtual const char* itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::GetNameOfClass | ( | ) | const [virtual] |
Return the name of this class as a string. Used by the object factory (implemented in New()) to instantiate objects of a named type. Also used for debugging and other output information.
Reimplemented from itk::LightObject.
Reimplemented in itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >, and itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.
void itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::operator= | ( | const Self & | ) | [private] |
Mutex lock to protect modification to the reference count
Reimplemented from itk::LightObject.
Reimplemented in itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >, and itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.
virtual void itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage | ( | ) | [pure virtual] |
void itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SetFunctionCount | ( | const unsigned int & | n | ) | [inline] |
Definition at line 131 of file itkRegionBasedLevelSetFunctionSharedData.h.
References itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_FunctionCount, itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_LevelSetDataPointerVector, and itk::LightObject::New().
void itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SetKdTree | ( | KdTreePointer | kdtree | ) | [inline] |
Definition at line 155 of file itkRegionBasedLevelSetFunctionSharedData.h.
References itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_KdTree.
void itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SetNumberOfNeighbors | ( | const unsigned int & | n | ) | [inline] |
Definition at line 145 of file itkRegionBasedLevelSetFunctionSharedData.h.
References itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_NumberOfNeighbors.
const unsigned int itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ImageDimension = TFeatureImage::ImageDimension [static] |
unsigned int itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_FunctionCount |
Definition at line 172 of file itkRegionBasedLevelSetFunctionSharedData.h.
Referenced by itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage(), itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage(), and itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SetFunctionCount().
KdTreePointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_KdTree |
Definition at line 175 of file itkRegionBasedLevelSetFunctionSharedData.h.
Referenced by itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage(), and itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SetKdTree().
LevelSetDataPointerVector itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_LevelSetDataPointerVector |
Definition at line 170 of file itkRegionBasedLevelSetFunctionSharedData.h.
Referenced by itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::CreateHeavisideFunctionOfLevelSetImage(), itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage(), and itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SetFunctionCount().
ListImagePointer itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_NearestNeighborListImage |
Definition at line 174 of file itkRegionBasedLevelSetFunctionSharedData.h.
Referenced by itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::AllocateListImage(), itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage(), and itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage().
unsigned int itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_NumberOfNeighbors |
Definition at line 173 of file itkRegionBasedLevelSetFunctionSharedData.h.
Referenced by itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage(), and itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SetNumberOfNeighbors().