itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension > Class Template Reference

#include <itkSpatialObjectToImageStatisticsCalculator.h>

Inheritance diagram for itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >:

Collaboration diagram for itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >:

List of all members.

Public Types
typedef NumericTraits < PixelType >::AccumulateType	AccumulateType
typedef SmartPointer< const Self >	ConstPointer
typedef TInputImage::ConstPointer	ImageConstPointer
typedef TInputImage::Pointer	ImagePointer
typedef TInputImage	ImageType
typedef TInputImage::IndexType	IndexType
typedef itk::FloodFilledSpatialFunctionConditionalConstIterator < ImageType, SpatialObjectType >	IteratorType
typedef Matrix< double, TSampleDimension, TSampleDimension >	MatrixType
typedef TInputImage::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef itk::Statistics::ListSample < VectorType >	SampleType
typedef SpatialObjectToImageStatisticsCalculator	Self
typedef SpatialObjectType::ConstPointer	SpatialObjectConstPointer
typedef SpatialObjectType::Pointer	SpatialObjectPointer
typedef TInputSpatialObject	SpatialObjectType
typedef Object	Superclass
typedef Vector< double, TSampleDimension >	VectorType
Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
const MatrixType &	GetCovarianceMatrix () const
const VectorType &	GetMean () const
virtual const char *	GetNameOfClass () const
virtual SizeValueType	GetNumberOfPixels () const
AccumulateType	GetSum () const
virtual void	SetImage (const ImageType *_arg)
virtual void	SetSpatialObject (SpatialObjectType *_arg)
void	Update (void)
virtual void	SetSampleDirection (unsigned int _arg)
virtual unsigned int	GetSampleDirection () const
Static Public Member Functions
static Pointer	New ()
Static Public Attributes
static const unsigned int	ImageDimension = ImageType::ImageDimension
static const unsigned int	ObjectDimension = TInputSpatialObject::ObjectDimension
static const unsigned int	SampleDimension = TSampleDimension
Protected Member Functions
bool	ComputeStatistics ()
void	PrintSelf (std::ostream &os, Indent indent) const
	SpatialObjectToImageStatisticsCalculator ()
virtual	~SpatialObjectToImageStatisticsCalculator ()
Private Member Functions
void	operator= (const Self &)
	SpatialObjectToImageStatisticsCalculator (const Self &)
Private Attributes
MatrixType	m_CovarianceMatrix
ImageConstPointer	m_Image
unsigned long	m_InternalImageTime
unsigned long	m_InternalSpatialObjectTime
VectorType	m_Mean
TimeStamp	m_ModifiedTime
SizeValueType	m_NumberOfPixels
SampleType::Pointer	m_Sample
unsigned int	m_SampleDirection
SpatialObjectPointer	m_SpatialObject
AccumulateType	m_Sum

---

Detailed Description

template<class TInputImage, class TInputSpatialObject, unsigned int TSampleDimension = 1>
class itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >

This calculator computes the mean and the covariance matrice of a certain region of an image specified by a spatial object.

Definition at line 37 of file itkSpatialObjectToImageStatisticsCalculator.h.

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Member Typedef Documentation

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef NumericTraits< PixelType >::AccumulateType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::AccumulateType

Definition at line 59 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef SmartPointer< const Self > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ConstPointer

Reimplemented from itk::Object.

Definition at line 44 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef TInputImage::ConstPointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ImageConstPointer

Definition at line 55 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef TInputImage::Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ImagePointer

Definition at line 54 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef TInputImage itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ImageType

Type definitions for the input image.

Definition at line 50 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef TInputImage::IndexType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::IndexType

Definition at line 57 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef itk::FloodFilledSpatialFunctionConditionalConstIterator< ImageType, SpatialObjectType > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::IteratorType

Type definition of the flood fill iterator

Definition at line 77 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef Matrix< double, TSampleDimension, TSampleDimension > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::MatrixType

Definition at line 81 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef TInputImage::PixelType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::PixelType

Definition at line 56 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef SmartPointer< Self > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::Pointer

Reimplemented from itk::Object.

Definition at line 43 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef itk::Statistics::ListSample< VectorType > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SampleType

Type definitions for the samples

Definition at line 84 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef SpatialObjectToImageStatisticsCalculator itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::Self

Standard class typedefs.

Reimplemented from itk::Object.

Definition at line 41 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef SpatialObjectType::ConstPointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectConstPointer

Definition at line 73 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef SpatialObjectType::Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectPointer

Definition at line 72 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef TInputSpatialObject itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectType

Type definitions for the input spatial object.

Definition at line 71 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef Object itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::Superclass

Reimplemented from itk::Object.

Definition at line 42 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

typedef Vector< double, TSampleDimension > itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::VectorType

Vector and Matrix Type

Definition at line 80 of file itkSpatialObjectToImageStatisticsCalculator.h.

---

Constructor & Destructor Documentation

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectToImageStatisticsCalculator

(

)

[protected]

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

virtual itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::~SpatialObjectToImageStatisticsCalculator

(

)

[inline, protected, virtual]

Definition at line 114 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SpatialObjectToImageStatisticsCalculator

(

const Self &

)

[private]

---

Member Function Documentation

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

bool itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ComputeStatistics

(

)

[protected]

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

virtual::itk::LightObject::Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::CreateAnother

(

void

)

const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

const MatrixType& itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetCovarianceMatrix

(

)

const [inline]

Get the covariance matrix

Definition at line 101 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

const VectorType& itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetMean

(

)

const [inline]

Get the mean

Definition at line 98 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

virtual const char* itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetNameOfClass

(

)

const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::Object.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

virtual SizeValueType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetNumberOfPixels

(

)

const [virtual]

Get the number of pixels inside the object

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

virtual unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetSampleDirection

(

)

const [virtual]

Set/Get the direction of the sample

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

AccumulateType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::GetSum

(

)

const [inline]

Get the sum of pixels

Definition at line 104 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

static Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::New

(

)

[static]

Method for creation through the object factory.

Reimplemented from itk::Object.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::operator=

(

const Self &

)

[private]

Mutex lock to protect modification to the reference count

Reimplemented from itk::Object.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Object.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

virtual void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SetImage

(

const ImageType *

_arg

)

[virtual]

Set the input image.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

virtual void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SetSampleDirection

(

unsigned int

_arg

)

[virtual]

Set/Get the direction of the sample

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

virtual void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SetSpatialObject

(

SpatialObjectType *

_arg

)

[virtual]

Set the input spatial object.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

void itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::Update

(

void

)

Compute of the input image.

---

Member Data Documentation

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

const unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ImageDimension = ImageType::ImageDimension [static]

Definition at line 62 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

MatrixType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_CovarianceMatrix [private]

Definition at line 131 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

ImageConstPointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_Image [private]

Definition at line 126 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

unsigned long itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_InternalImageTime [private]

Definition at line 133 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

unsigned long itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_InternalSpatialObjectTime [private]

Definition at line 134 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

VectorType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_Mean [private]

Definition at line 128 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

TimeStamp itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_ModifiedTime [private]

Definition at line 135 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

SizeValueType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_NumberOfPixels [private]

Definition at line 130 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

SampleType::Pointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_Sample [private]

Definition at line 137 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_SampleDirection [private]

Definition at line 132 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

SpatialObjectPointer itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_SpatialObject [private]

Definition at line 127 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

AccumulateType itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::m_Sum [private]

Definition at line 129 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

const unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::ObjectDimension = TInputSpatialObject::ObjectDimension [static]

Definition at line 68 of file itkSpatialObjectToImageStatisticsCalculator.h.

template<class TInputImage , class TInputSpatialObject , unsigned int TSampleDimension = 1>

const unsigned int itk::SpatialObjectToImageStatisticsCalculator< TInputImage, TInputSpatialObject, TSampleDimension >::SampleDimension = TSampleDimension [static]

Definition at line 65 of file itkSpatialObjectToImageStatisticsCalculator.h.

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The documentation for this class was generated from the following file:

• itkSpatialObjectToImageStatisticsCalculator.h