ITK
4.1.0
Insight Segmentation and Registration Toolkit
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#include <itkVectorImage.h>
Templated n-dimensional vector image class.
This class differs from Image in that it is intended to represent multiple images. Each pixel represents k measurements, each of datatype TPixel. The memory organization of the resulting image is as follows: ... Pi0 Pi1 Pi2 Pi3 P(i+1)0 P(i+1)1 P(i+1)2 P(i+1)3 P(i+2)0 ... where Pi0 represents the 0th measurement of the pixel at index i.
Conceptually, a VectorImage< TPixel, 3 >
is the same as a Image< VariableLengthVector< TPixel >, 3 >
. The difference lies in the memory organization. The latter results in a fragmented organization with each location in the Image holding a pointer to an VariableLengthVector
holding the actual pixel. The former stores the k pixels instead of a pointer reference, which apart from avoiding fragmentation of memory also avoids storing a 8 bytes of pointer reference for each pixel. The parameter k can be set using SetVectorLength
.
The API of the class is such that it returns a pixeltype VariableLengthVector< TPixel > when queried, with the data internally pointing to the buffer. (the container does not manage the memory). Similarly SetPixel calls can be made with VariableLengthVector< TPixel >.
The API of this class is similar to Image.
Definition at line 82 of file itkVectorImage.h.
typedef DefaultVectorPixelAccessorFunctor< Self > itk::VectorImage< TPixel, VImageDimension >::AccessorFunctorType |
Functor to provide a common API between DefaultPixelAccessor and DefaultVectorPixelAccessor
Definition at line 121 of file itkVectorImage.h.
typedef DefaultVectorPixelAccessor< InternalPixelType > itk::VectorImage< TPixel, VImageDimension >::AccessorType |
Accessor type that convert data between internal and external representations.
Definition at line 117 of file itkVectorImage.h.
typedef SmartPointer< const Self > itk::VectorImage< TPixel, VImageDimension >::ConstPointer |
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 90 of file itkVectorImage.h.
typedef WeakPointer< const Self > itk::VectorImage< TPixel, VImageDimension >::ConstWeakPointer |
Definition at line 91 of file itkVectorImage.h.
typedef Superclass::DirectionType itk::VectorImage< TPixel, VImageDimension >::DirectionType |
Direction typedef support. A matrix of direction cosines.
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 148 of file itkVectorImage.h.
typedef Superclass::IndexType itk::VectorImage< TPixel, VImageDimension >::IndexType |
Index typedef support. An index is used to access pixel values.
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 135 of file itkVectorImage.h.
typedef Superclass::IndexValueType itk::VectorImage< TPixel, VImageDimension >::IndexValueType |
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 136 of file itkVectorImage.h.
typedef TPixel itk::VectorImage< TPixel, VImageDimension >::InternalPixelType |
This is the actual pixel type contained in the buffer. Each vector pixel is composed of 'm_VectorLength' contiguous InternalPixelType.
Definition at line 108 of file itkVectorImage.h.
typedef InternalPixelType itk::VectorImage< TPixel, VImageDimension >::IOPixelType |
Definition at line 113 of file itkVectorImage.h.
typedef VectorImageNeighborhoodAccessorFunctor< Self > itk::VectorImage< TPixel, VImageDimension >::NeighborhoodAccessorFunctorType |
Typedef for the functor used to access a neighborhood of pixel pointers.
Definition at line 126 of file itkVectorImage.h.
typedef Superclass::OffsetType itk::VectorImage< TPixel, VImageDimension >::OffsetType |
Offset typedef support. An offset is used to access pixel values.
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 139 of file itkVectorImage.h.
typedef Superclass::OffsetValueType itk::VectorImage< TPixel, VImageDimension >::OffsetValueType |
Offset typedef (relative position between indices)
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 167 of file itkVectorImage.h.
typedef ImportImageContainer< SizeValueType, InternalPixelType > itk::VectorImage< TPixel, VImageDimension >::PixelContainer |
Container used to store pixels in the image.
Definition at line 145 of file itkVectorImage.h.
typedef PixelContainer::ConstPointer itk::VectorImage< TPixel, VImageDimension >::PixelContainerConstPointer |
Definition at line 164 of file itkVectorImage.h.
typedef PixelContainer::Pointer itk::VectorImage< TPixel, VImageDimension >::PixelContainerPointer |
A pointer to the pixel container.
Definition at line 163 of file itkVectorImage.h.
typedef VariableLengthVector< TPixel > itk::VectorImage< TPixel, VImageDimension >::PixelType |
Pixel typedef support. Used to declare pixel type in filters or other operations. This is not the actual pixel type contained in the buffer, ie m_Buffer. The image exhibits an external API of an VariableLengthVector< T > and internally stores its data as type T.
Definition at line 97 of file itkVectorImage.h.
typedef SmartPointer< Self > itk::VectorImage< TPixel, VImageDimension >::Pointer |
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 89 of file itkVectorImage.h.
typedef Superclass::PointType itk::VectorImage< TPixel, VImageDimension >::PointType |
Origin typedef support. The origin is the geometric coordinates of the index (0,0).
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 160 of file itkVectorImage.h.
typedef Superclass::RegionType itk::VectorImage< TPixel, VImageDimension >::RegionType |
Region typedef support. A region is used to specify a subset of an image.
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 152 of file itkVectorImage.h.
typedef VectorImage itk::VectorImage< TPixel, VImageDimension >::Self |
Standard class typedefs
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 87 of file itkVectorImage.h.
typedef Superclass::SizeType itk::VectorImage< TPixel, VImageDimension >::SizeType |
Size typedef support. A size is used to define region bounds.
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 142 of file itkVectorImage.h.
typedef Superclass::SpacingType itk::VectorImage< TPixel, VImageDimension >::SpacingType |
Spacing typedef support. Spacing holds the size of a pixel. The spacing is the geometric distance between image samples.
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 156 of file itkVectorImage.h.
typedef ImageBase< VImageDimension > itk::VectorImage< TPixel, VImageDimension >::Superclass |
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 88 of file itkVectorImage.h.
typedef PixelType itk::VectorImage< TPixel, VImageDimension >::ValueType |
Typedef alias for PixelType
Definition at line 111 of file itkVectorImage.h.
typedef unsigned int itk::VectorImage< TPixel, VImageDimension >::VectorLengthType |
Definition at line 169 of file itkVectorImage.h.
itk::VectorImage< TPixel, VImageDimension >::VectorImage | ( | ) | [protected] |
virtual itk::VectorImage< TPixel, VImageDimension >::~VectorImage | ( | ) | [inline, protected, virtual] |
Definition at line 353 of file itkVectorImage.h.
itk::VectorImage< TPixel, VImageDimension >::VectorImage | ( | const Self & | ) | [private] |
void itk::VectorImage< TPixel, VImageDimension >::Allocate | ( | ) | [virtual] |
Allocate the image memory. The size of the image must already be set, e.g. by calling SetRegions().
Reimplemented from itk::ImageBase< VImageDimension >.
virtual::itk::LightObject::Pointer itk::VectorImage< TPixel, VImageDimension >::CreateAnother | ( | void | ) | const [virtual] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::ImageBase< VImageDimension >.
void itk::VectorImage< TPixel, VImageDimension >::FillBuffer | ( | const PixelType & | value | ) |
Fill the image buffer with a value. Be sure to call Allocate() first.
InternalPixelType* itk::VectorImage< TPixel, VImageDimension >::GetBufferPointer | ( | ) | [inline] |
Return a pointer to the beginning of the buffer. This is used by the image iterator class.
Definition at line 289 of file itkVectorImage.h.
const InternalPixelType* itk::VectorImage< TPixel, VImageDimension >::GetBufferPointer | ( | ) | const [inline] |
Return a pointer to the beginning of the buffer. This is used by the image iterator class.
Definition at line 293 of file itkVectorImage.h.
virtual const char* itk::VectorImage< TPixel, VImageDimension >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::ImageBase< VImageDimension >.
NeighborhoodAccessorFunctorType itk::VectorImage< TPixel, VImageDimension >::GetNeighborhoodAccessor | ( | ) | [inline] |
Return the NeighborhoodAccessor functor
Definition at line 328 of file itkVectorImage.h.
const NeighborhoodAccessorFunctorType itk::VectorImage< TPixel, VImageDimension >::GetNeighborhoodAccessor | ( | ) | const [inline] |
Return the NeighborhoodAccessor functor
Definition at line 334 of file itkVectorImage.h.
virtual unsigned int itk::VectorImage< TPixel, VImageDimension >::GetNumberOfComponentsPerPixel | ( | ) | const [virtual] |
Get/Set the number of components each pixel has, ie the VectorLength
Reimplemented from itk::ImageBase< VImageDimension >.
const PixelType itk::VectorImage< TPixel, VImageDimension >::GetPixel | ( | const IndexType & | index | ) | const [inline] |
Get a pixel (read only version).
For efficiency, this function does not check that the image has actually been allocated yet. Note that the method returns a pixel on the stack.
Definition at line 253 of file itkVectorImage.h.
PixelType itk::VectorImage< TPixel, VImageDimension >::GetPixel | ( | const IndexType & | index | ) | [inline] |
Get a reference to a pixel (e.g. for editing).
For efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 265 of file itkVectorImage.h.
AccessorType itk::VectorImage< TPixel, VImageDimension >::GetPixelAccessor | ( | void | ) | [inline] |
Return the Pixel Accessor object
Definition at line 322 of file itkVectorImage.h.
const AccessorType itk::VectorImage< TPixel, VImageDimension >::GetPixelAccessor | ( | void | ) | const [inline] |
Return the Pixel Accesor object
Definition at line 325 of file itkVectorImage.h.
PixelContainer* itk::VectorImage< TPixel, VImageDimension >::GetPixelContainer | ( | ) | [inline] |
Return a pointer to the container.
Definition at line 300 of file itkVectorImage.h.
const PixelContainer* itk::VectorImage< TPixel, VImageDimension >::GetPixelContainer | ( | ) | const [inline] |
Return a pointer to the container.
Definition at line 303 of file itkVectorImage.h.
virtual const VectorLengthType& itk::VectorImage< TPixel, VImageDimension >::GetVectorLength | ( | ) | [virtual] |
Set/Get macros for the length of each vector in the vector image
virtual void itk::VectorImage< TPixel, VImageDimension >::Graft | ( | const DataObject * | data | ) | [virtual] |
Graft the data and information from one image to another. This is a convenience method to setup a second image with all the meta information of another image and use the same pixel container. Note that this method is different than just using two SmartPointers to the same image since separate DataObjects are still maintained. This method is similar to ImageSource::GraftOutput(). The implementation in ImageBase simply calls CopyInformation() and copies the region ivars. The implementation here refers to the superclass' implementation and then copies over the pixel container.
Reimplemented from itk::ImageBase< VImageDimension >.
virtual void itk::VectorImage< TPixel, VImageDimension >::Initialize | ( | ) | [virtual] |
Restore the data object to its initial state. This means releasing memory.
Reimplemented from itk::ImageBase< VImageDimension >.
static Pointer itk::VectorImage< TPixel, VImageDimension >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::ImageBase< VImageDimension >.
void itk::VectorImage< TPixel, VImageDimension >::operator= | ( | const Self & | ) | [private] |
Reimplemented from itk::ImageBase< VImageDimension >.
PixelType itk::VectorImage< TPixel, VImageDimension >::operator[] | ( | const IndexType & | index | ) | [inline] |
Access a pixel. This version cannot be an lvalue because the pixel is converted on the fly to a VariableLengthVector.
For efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 278 of file itkVectorImage.h.
PixelType itk::VectorImage< TPixel, VImageDimension >::operator[] | ( | const IndexType & | index | ) | const [inline] |
Access a pixel. This version can only be an rvalue because the pixel is converted on the fly to a VariableLengthVector.
For efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 285 of file itkVectorImage.h.
void itk::VectorImage< TPixel, VImageDimension >::PrintSelf | ( | std::ostream & | os, |
Indent | indent | ||
) | const [protected, virtual] |
Method for grafting the content of one data object into another one. This method is intended to be overloaded by derived classes. Each one of them should use dynamic_casting in order to verify that the grafted object is actually of the same type as the class on which the Graft() method was invoked.
Reimplemented from itk::ImageBase< VImageDimension >.
virtual void itk::VectorImage< TPixel, VImageDimension >::SetNumberOfComponentsPerPixel | ( | unsigned int | n | ) | [virtual] |
Reimplemented from itk::ImageBase< VImageDimension >.
void itk::VectorImage< TPixel, VImageDimension >::SetPixel | ( | const IndexType & | index, |
const PixelType & | value | ||
) | [inline] |
Set a pixel value.
Allocate() needs to have been called first -- for efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 238 of file itkVectorImage.h.
void itk::VectorImage< TPixel, VImageDimension >::SetPixelContainer | ( | PixelContainer * | container | ) |
Set the container to use. Note that this does not cause the DataObject to be modified.
void itk::VectorImage< TPixel, VImageDimension >::SetRegions | ( | RegionType | region | ) | [inline] |
Convenience methods to set the LargestPossibleRegion, BufferedRegion and RequestedRegion. Allocate must still be called.
Definition at line 208 of file itkVectorImage.h.
void itk::VectorImage< TPixel, VImageDimension >::SetRegions | ( | SizeType | size | ) | [inline] |
Definition at line 216 of file itkVectorImage.h.
virtual void itk::VectorImage< TPixel, VImageDimension >::SetVectorLength | ( | VectorLengthType | _arg | ) | [virtual] |
Set/Get macros for the length of each vector in the vector image
const unsigned int itk::VectorImage< TPixel, VImageDimension >::ImageDimension = VImageDimension [static] |
Dimension of the image. This constant is used by functions that are templated over image type (as opposed to being templated over pixel type and dimension) when they need compile time access to the dimension of the image.
Reimplemented from itk::ImageBase< VImageDimension >.
Definition at line 132 of file itkVectorImage.h.
PixelContainerPointer itk::VectorImage< TPixel, VImageDimension >::m_Buffer [private] |
Memory for the current buffer.
Definition at line 362 of file itkVectorImage.h.
VectorLengthType itk::VectorImage< TPixel, VImageDimension >::m_VectorLength [private] |
Length of the "vector pixel"
Definition at line 359 of file itkVectorImage.h.