itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet > Class Template Reference

#include <itkImageRegistrationMethodv4.h>

Inheritance diagram for itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >:

Collaboration diagram for itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >:

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>
class itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >

Interface method for the current registration framework.

This interface method class encapsulates typical registration usage by incorporating all the necessary elements for performing a simple image registration between two images. This method also allows for multistage registration whereby each stage is characterize by possibly different transforms of and different image metrics. For example, many users will want to perform a linear registration followed by deformable registration where both stages are performed in multiple levels. Each level can be characterized by:

• the resolution of the virtual domain image (see below)
• smoothing of the fixed and moving images
• the coarseness of the current transform via transform adaptors (see below)

Multiple stages are handled by linking multiple instantiations of this class where the output transform is added to the optional composite transform input.

Transform adaptors: To accommodate new changes to the current ITK registration framework, we introduced the concept of transform adaptors. Whereas each stage is associated with a moving and, possibly, fixed transform, each level of each stage is defined by a transform adaptor which describes how to adapt the transform to the current level. For example, if one were to use the B-spline transform during a deformable registration stage, common practice is to increase the resolution of the B-spline mesh (or, analogously, the control point grid size) at each level. At each level, one would define the parameters of the B-spline transform adaptor at that level which increases the resolution from the previous level. For many transforms, such as affine, this concept of an adaptor may be nonsensical. For this reason, the base transform adaptor class does not do anything to the transform but merely passes it through. Each level of each stage must define a transform adaptor but, by default, the base adaptor class is assigned which, again, does not do anything to the transform. A special mention should be made of the transform adaptor at level 0 of any stage. Most likely, the user will not want to do anything to the transform as it enters into the given stage so typical use will be to assign the base adaptor class to level 0 of all stages but we leave that open to the user.

Output: The output is the updated transform.

Author

Nick Tustison

Brian Avants

Examples:

Examples/RegistrationITKv4/DeformableRegistration12.cxx, Examples/RegistrationITKv4/DeformableRegistration4.cxx, Examples/RegistrationITKv4/DeformableRegistration6.cxx, Examples/RegistrationITKv4/DeformableRegistration7.cxx, Examples/RegistrationITKv4/DeformableRegistration8.cxx, Examples/RegistrationITKv4/ImageRegistration1.cxx, Examples/RegistrationITKv4/ImageRegistration11.cxx, Examples/RegistrationITKv4/ImageRegistration12.cxx, Examples/RegistrationITKv4/ImageRegistration13.cxx, Examples/RegistrationITKv4/ImageRegistration3.cxx, Examples/RegistrationITKv4/ImageRegistration4.cxx, Examples/RegistrationITKv4/ImageRegistration5.cxx, Examples/RegistrationITKv4/ImageRegistration6.cxx, Examples/RegistrationITKv4/ImageRegistration7.cxx, Examples/RegistrationITKv4/ImageRegistration8.cxx, Examples/RegistrationITKv4/ImageRegistration9.cxx, Examples/RegistrationITKv4/MultiResImageRegistration1.cxx, Examples/RegistrationITKv4/MultiStageImageRegistration1.cxx, Examples/RegistrationITKv4/MultiStageImageRegistration2.cxx, SphinxExamples/src/Registration/Common/Perform2DTranslationRegistrationWithMeanSquares/Code.cxx, and WikiExamples/Registration/ExhaustiveOptimizer.cxx.

Definition at line 94 of file itkImageRegistrationMethodv4.h.

Public Types
typedef CompositeTransformType::Pointer	CompositeTransformPointer
typedef CompositeTransform < RealType, ImageDimension >	CompositeTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef ProcessObject::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
typedef DecoratedInitialTransformType::Pointer	DecoratedInitialTransformPointer
typedef DataObjectDecorator < InitialTransformType >	DecoratedInitialTransformType
typedef DecoratedOutputTransformType::Pointer	DecoratedOutputTransformPointer
typedef DataObjectDecorator < OutputTransformType >	DecoratedOutputTransformType
typedef OutputTransformType::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef FixedImageMaskType::ConstPointer	FixedImageMaskConstPointer
typedef std::vector < FixedImageMaskConstPointer >	FixedImageMasksContainerType
typedef ImageMetricType::FixedImageMaskType	FixedImageMaskType
typedef FixedImageType::Pointer	FixedImagePointer
typedef std::vector < FixedImagePointer >	FixedImagesContainerType
typedef TFixedImage	FixedImageType
typedef ImageToImageMetricv4 < FixedImageType, MovingImageType, VirtualImageType, RealType >	ImageMetricType
typedef InitialTransformType::Pointer	InitialTransformPointer
typedef Transform< RealType, ImageDimension, ImageDimension >	InitialTransformType
typedef MetricType::Pointer	MetricPointer
typedef ImageMetricType::FixedSampledPointSetType	MetricSamplePointSetType
typedef Array< RealType >	MetricSamplingPercentageArrayType
enum	MetricSamplingStrategyType {   NONE,   REGULAR,   RANDOM }
typedef ObjectToObjectMetricBaseTemplate < RealType >	MetricType
typedef MovingImageMaskType::ConstPointer	MovingImageMaskConstPointer
typedef std::vector < MovingImageMaskConstPointer >	MovingImageMasksContainerType
typedef ImageMetricType::MovingImageMaskType	MovingImageMaskType
typedef MovingImageType::Pointer	MovingImagePointer
typedef std::vector < MovingImagePointer >	MovingImagesContainerType
typedef TMovingImage	MovingImageType
typedef ObjectToObjectMultiMetricv4 < ImageDimension, ImageDimension, VirtualImageType, RealType >	MultiMetricType
typedef OptimizerType::Pointer	OptimizerPointer
typedef ObjectToObjectOptimizerBaseTemplate < RealType >	OptimizerType
typedef OptimizerType::ScalesType	OptimizerWeightsType
typedef OutputTransformType::Pointer	OutputTransformPointer
typedef TOutputTransform	OutputTransformType
typedef SmartPointer< Self >	Pointer
typedef PointSetType::ConstPointer	PointSetConstPointer
typedef PointSetToPointSetMetricv4 < PointSetType, PointSetType, RealType >	PointSetMetricType
typedef std::vector < PointSetConstPointer >	PointSetsContainerType
typedef TPointSet	PointSetType
typedef OutputTransformType::ScalarType	RealType
typedef ImageRegistrationMethodv4	Self
typedef Array< SizeValueType >	ShrinkFactorsArrayType
typedef ShrinkFilterType::ShrinkFactorsType	ShrinkFactorsPerDimensionContainerType
typedef ShrinkImageFilter < FixedImageType, VirtualImageType >	ShrinkFilterType
typedef Array< RealType >	SmoothingSigmasArrayType
typedef ProcessObject	Superclass
typedef TransformParametersAdaptorType::Pointer	TransformParametersAdaptorPointer
typedef std::vector < TransformParametersAdaptorPointer >	TransformParametersAdaptorsContainerType
typedef TransformParametersAdaptorBase < InitialTransformType >	TransformParametersAdaptorType
typedef Vector< RealType, ImageDimension >	VectorType
typedef VirtualImageBaseType::ConstPointer	VirtualImageBaseConstPointer
typedef ImageBase< ImageDimension >	VirtualImageBaseType
typedef VirtualImageType::Pointer	VirtualImagePointer
typedef TVirtualImage	VirtualImageType
Public Types inherited from itk::ProcessObject
typedef SmartPointer< const Self >	ConstPointer
typedef DataObject::DataObjectIdentifierType	DataObjectIdentifierType
typedef DataObject::Pointer	DataObjectPointer
typedef std::vector < DataObjectPointer >	DataObjectPointerArray
typedef DataObjectPointerArray::size_type	DataObjectPointerArraySizeType
typedef MultiThreader	MultiThreaderType
typedef std::vector < DataObjectIdentifierType >	NameArray
typedef SmartPointer< Self >	Pointer
typedef ProcessObject	Self
typedef Object	Superclass
Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef Object	Self
typedef LightObject	Superclass
Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef LightObject	Self

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const
virtual const RealType &	GetCurrentConvergenceValue () const
virtual const SizeValueType &	GetCurrentIteration () const
virtual SizeValueType	GetCurrentLevel () const
virtual const RealType &	GetCurrentMetricValue () const
virtual const InitialTransformType *	GetFixedInitialTransform () const
virtual const DataObjectDecorator < InitialTransformType > *	GetFixedInitialTransformInput () const
virtual const DataObjectDecorator < InitialTransformType > *	GetFixedInitialTransformInput () const
virtual const InitialTransformType *	GetInitialTransform () const
virtual const DataObjectDecorator < InitialTransformType > *	GetInitialTransformInput () const
virtual const DataObjectDecorator < InitialTransformType > *	GetInitialTransformInput () const
virtual const DataObjectDecorator < InitialTransformType > *	GetInputnumber () const
virtual const DataObjectDecorator < InitialTransformType > *	GetInputnumber () const
virtual const DataObjectDecorator < InitialTransformType > *	GetInputnumber () const
virtual const bool &	GetIsConverged () const
virtual OutputTransformType *	GetModifiableTransform ()
virtual const InitialTransformType *	GetMovingInitialTransform () const
virtual const DataObjectDecorator < InitialTransformType > *	GetMovingInitialTransformInput () const
virtual const DataObjectDecorator < InitialTransformType > *	GetMovingInitialTransformInput () const
virtual const char *	GetNameOfClass () const
virtual const OutputTransformType *	GetTransform () const
virtual DecoratedOutputTransformType *	GetTransformOutput ()
virtual const DecoratedOutputTransformType *	GetTransformOutput () const
void	InitializeCenterOfLinearOutputTransform ()
virtual DataObjectPointer	MakeOutput (DataObjectPointerArraySizeType) override
virtual void	SetFixedInitialTransform (const InitialTransformType *_arg)
virtual void	SetFixedInitialTransformInput (const DataObjectDecorator< InitialTransformType > *_arg)
virtual void	SetInitialTransform (const InitialTransformType *_arg)
virtual void	SetInitialTransformInput (const DataObjectDecorator< InitialTransformType > *_arg)
virtual void	SetInputnumber (const DataObjectDecorator< InitialTransformType > *_arg)
virtual void	SetInputnumber (const DataObjectDecorator< InitialTransformType > *_arg)
virtual void	SetInputnumber (const DataObjectDecorator< InitialTransformType > *_arg)
void	SetMetricSamplingPercentage (const RealType)
virtual void	SetMovingInitialTransform (const InitialTransformType *_arg)
virtual void	SetMovingInitialTransformInput (const DataObjectDecorator< InitialTransformType > *_arg)
virtual void	SetFixedImage (const FixedImageType *image)
virtual const FixedImageType *	GetFixedImage () const
virtual void	SetFixedImage (SizeValueType, const FixedImageType *)
virtual const FixedImageType *	GetFixedImage (SizeValueType) const
virtual void	SetMovingImage (const MovingImageType *image)
virtual const MovingImageType *	GetMovingImage () const
virtual void	SetMovingImage (SizeValueType, const MovingImageType *)
virtual const MovingImageType *	GetMovingImage (SizeValueType) const
virtual void	SetFixedPointSet (const PointSetType *pointSet)
virtual const PointSetType *	GetFixedPointSet () const
virtual void	SetFixedPointSet (SizeValueType, const PointSetType *)
virtual const PointSetType *	GetFixedPointSet (SizeValueType) const
virtual void	SetMovingPointSet (const PointSetType *pointSet)
virtual const PointSetType *	GetMovingPointSet () const
virtual void	SetMovingPointSet (SizeValueType, const PointSetType *)
virtual const PointSetType *	GetMovingPointSet (SizeValueType) const
virtual void	SetOptimizer (OptimizerType *_arg)
virtual OptimizerType *	GetModifiableOptimizer ()
virtual const OptimizerType *	GetOptimizer () const
void	SetOptimizerWeights (OptimizerWeightsType &)
virtual OptimizerWeightsType	GetOptimizerWeights () const
virtual void	SetMetric (MetricType *_arg)
virtual MetricType *	GetModifiableMetric ()
virtual const MetricType *	GetMetric () const
virtual void	SetMetricSamplingStrategy (MetricSamplingStrategyType _arg)
virtual MetricSamplingStrategyType	GetMetricSamplingStrategy () const
void	MetricSamplingReinitializeSeed ()
void	MetricSamplingReinitializeSeed (int seed)
virtual void	SetMetricSamplingPercentagePerLevel (const MetricSamplingPercentageArrayType &samplingPercentages)
virtual MetricSamplingPercentageArrayType	GetMetricSamplingPercentagePerLevel () const
void	SetTransformParametersAdaptorsPerLevel (TransformParametersAdaptorsContainerType &)
const TransformParametersAdaptorsContainerType &	GetTransformParametersAdaptorsPerLevel () const
void	SetNumberOfLevels (const SizeValueType)
virtual SizeValueType	GetNumberOfLevels () const
void	SetShrinkFactorsPerLevel (ShrinkFactorsArrayType factors)
ShrinkFactorsPerDimensionContainerType	GetShrinkFactorsPerDimension (const unsigned int level) const
void	SetShrinkFactorsPerDimension (unsigned int level, ShrinkFactorsPerDimensionContainerType factors)
virtual void	SetSmoothingSigmasPerLevel (SmoothingSigmasArrayType _arg)
virtual SmoothingSigmasArrayType	GetSmoothingSigmasPerLevel () const
virtual void	SetSmoothingSigmasAreSpecifiedInPhysicalUnits (bool _arg)
virtual bool	GetSmoothingSigmasAreSpecifiedInPhysicalUnits () const
virtual void	SmoothingSigmasAreSpecifiedInPhysicalUnitsOn ()
virtual void	SmoothingSigmasAreSpecifiedInPhysicalUnitsOff ()
virtual DecoratedOutputTransformType *	GetOutput ()
virtual const DecoratedOutputTransformType *	GetOutput () const
virtual void	SetInPlace (bool _arg)
virtual bool	GetInPlace () const
virtual void	InPlaceOn ()
virtual void	InPlaceOff ()
virtual void	InitializeCenterOfLinearOutputTransformOn ()
virtual void	InitializeCenterOfLinearOutputTransformOff ()
virtual void	SetInitializeCenterOfLinearOutputTransform (bool _arg)
virtual bool	GetInitializeCenterOfLinearOutputTransform () const
Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual void	EnlargeOutputRequestedRegion (DataObject *)
virtual const bool &	GetAbortGenerateData () const
DataObjectPointerArray	GetIndexedInputs ()
DataObjectPointerArray	GetIndexedOutputs ()
NameArray	GetInputNames () const
DataObjectPointerArray	GetInputs ()
MultiThreaderType *	GetMultiThreader () const
DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
NameArray	GetOutputNames () const
DataObjectPointerArray	GetOutputs ()
virtual const float &	GetProgress () const
NameArray	GetRequiredInputNames () const
bool	HasInput (const DataObjectIdentifierType &key) const
bool	HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer	MakeOutput (const DataObjectIdentifierType &)
virtual void	PrepareOutputs ()
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float progress)
void	SetProgress (float progress)
virtual void	SetReleaseDataFlag (bool flag)
virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool &	GetReleaseDataBeforeUpdateFlag () const
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType &	GetNumberOfThreads () const
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary ()
const MetaDataDictionary &	GetMetaDataDictionary () const
virtual ModifiedTimeType	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const override
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int) override
virtual void	UnRegister () const noexceptoverride
virtual void	SetObjectName (std::string _arg)
virtual const std::string &	GetObjectName () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
static void	SetGlobalWarningDisplay (bool flag)
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()

Static Public Attributes
static const unsigned int	ImageDimension = TFixedImage::ImageDimension

Protected Member Functions
virtual void	AllocateOutputs ()
virtual void	GenerateData () override
virtual VirtualImageBaseConstPointer	GetCurrentLevelVirtualDomainImage ()
	ImageRegistrationMethodv4 ()
virtual void	InitializeRegistrationAtEachLevel (const SizeValueType)
virtual void	PrintSelf (std::ostream &os, Indent indent) const override
virtual void	SetMetricSamplePoints ()
virtual	~ImageRegistrationMethodv4 () override
Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)
void	AddOptionalInputName (const DataObjectIdentifierType &)
void	AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
virtual void	AddOutput (DataObject *output)
bool	AddRequiredInputName (const DataObjectIdentifierType &)
bool	AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
virtual void	CacheInputReleaseDataFlags ()
virtual void	GenerateInputRequestedRegion ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
DataObject *	GetInput (const DataObjectIdentifierType &key)
const DataObject *	GetInput (const DataObjectIdentifierType &key) const
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs () const
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs () const
bool	IsIndexedInputName (const DataObjectIdentifierType &) const
bool	IsIndexedOutputName (const DataObjectIdentifierType &) const
bool	IsRequiredInputName (const DataObjectIdentifierType &) const
	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
	itkLegacyMacro (virtual void RemoveInput(DataObject *input))
	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType	MakeIndexFromInputName (const DataObjectIdentifierType &name) const
DataObjectPointerArraySizeType	MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
DataObjectIdentifierType	MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
DataObjectIdentifierType	MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
virtual void	PopBackInput ()
virtual void	PopFrontInput ()
	ProcessObject ()
virtual void	PropagateResetPipeline ()
virtual void	PushBackInput (const DataObject *input)
virtual void	PushFrontInput (const DataObject *input)
virtual void	ReleaseInputs ()
virtual void	RemoveInput (const DataObjectIdentifierType &key)
virtual void	RemoveInput (DataObjectPointerArraySizeType)
virtual void	RemoveOutput (const DataObjectIdentifierType &key)
virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)
bool	RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void	RestoreInputReleaseDataFlags ()
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void	SetPrimaryInput (DataObject *input)
virtual void	SetPrimaryOutput (DataObject *output)
void	SetRequiredInputNames (const NameArray &)
virtual void	VerifyInputInformation ()
virtual void	VerifyPreconditions ()
	~ProcessObject () override
DataObject *	GetInput (DataObjectPointerArraySizeType idx)
const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryInput ()
const DataObject *	GetPrimaryInput () const
virtual void	SetPrimaryInputName (const DataObjectIdentifierType &key)
virtual const char *	GetPrimaryInputName (void) const
DataObject *	GetOutput (const DataObjectIdentifierType &key)
const DataObject *	GetOutput (const DataObjectIdentifierType &key) const
virtual void	SetPrimaryOutputName (const DataObjectIdentifierType &key)
virtual const char *	GetPrimaryOutputName (void) const
DataObject *	GetOutput (DataObjectPointerArraySizeType idx)
const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryOutput ()
const DataObject *	GetPrimaryOutput () const
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object () override
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Protected Attributes
CompositeTransformPointer	m_CompositeTransform
RealType	m_CurrentConvergenceValue
SizeValueType	m_CurrentIteration
SizeValueType	m_CurrentLevel
RealType	m_CurrentMetricValue
int	m_CurrentRandomSeed
int	m_FirstImageMetricIndex
FixedImageMasksContainerType	m_FixedImageMasks
PointSetsContainerType	m_FixedPointSets
FixedImagesContainerType	m_FixedSmoothImages
bool	m_IsConverged
MetricPointer	m_Metric
MetricSamplingPercentageArrayType	m_MetricSamplingPercentagePerLevel
MetricSamplingStrategyType	m_MetricSamplingStrategy
MovingImageMasksContainerType	m_MovingImageMasks
PointSetsContainerType	m_MovingPointSets
MovingImagesContainerType	m_MovingSmoothImages
SizeValueType	m_NumberOfFixedObjects
SizeValueType	m_NumberOfLevels
SizeValueType	m_NumberOfMetrics
SizeValueType	m_NumberOfMovingObjects
OptimizerPointer	m_Optimizer
OptimizerWeightsType	m_OptimizerWeights
bool	m_OptimizerWeightsAreIdentity
OutputTransformPointer	m_OutputTransform
int	m_RandomSeed
bool	m_ReseedIterator
std::vector < ShrinkFactorsPerDimensionContainerType >	m_ShrinkFactorsPerLevel
bool	m_SmoothingSigmasAreSpecifiedInPhysicalUnits
SmoothingSigmasArrayType	m_SmoothingSigmasPerLevel
TransformParametersAdaptorsContainerType	m_TransformParametersAdaptorsPerLevel
VirtualImagePointer	m_VirtualDomainImage
Protected Attributes inherited from itk::ProcessObject
TimeStamp	m_OutputInformationMTime
bool	m_Updating
Protected Attributes inherited from itk::LightObject
AtomicInt< int >	m_ReferenceCount

Static Private Member Functions
template<typename TTransform >
static void	MakeOutputTransform (SmartPointer< TTransform > &ptr)
static void	MakeOutputTransform (SmartPointer< InitialTransformType > &ptr)

Private Attributes
bool	m_InitializeCenterOfLinearOutputTransform
bool	m_InPlace

Member Typedef Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef CompositeTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::CompositeTransformPointer

Definition at line 136 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef CompositeTransform<RealType, ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::CompositeTransformType

Definition at line 135 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef SmartPointer<const Self> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::ConstPointer

Definition at line 102 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ProcessObject::DataObjectPointerArraySizeType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::DataObjectPointerArraySizeType

Make a DataObject of the correct type to be used as the specified output.

Definition at line 394 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef DecoratedInitialTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::DecoratedInitialTransformPointer

Definition at line 166 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef DataObjectDecorator<InitialTransformType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::DecoratedInitialTransformType

Definition at line 165 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef DecoratedOutputTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::DecoratedOutputTransformPointer

Definition at line 164 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef DataObjectDecorator<OutputTransformType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::DecoratedOutputTransformType

Type for the output: Using Decorator pattern for enabling the transform to be passed in the data pipeline

Definition at line 163 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef OutputTransformType::DerivativeType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::DerivativeType

Definition at line 129 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef DerivativeType::ValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::DerivativeValueType

Definition at line 130 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef FixedImageMaskType::ConstPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::FixedImageMaskConstPointer

Definition at line 153 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef std::vector<FixedImageMaskConstPointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::FixedImageMasksContainerType

Definition at line 154 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ImageMetricType::FixedImageMaskType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::FixedImageMaskType

Definition at line 152 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef FixedImageType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::FixedImagePointer

Definition at line 115 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef std::vector<FixedImagePointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::FixedImagesContainerType

Definition at line 116 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef TFixedImage itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::FixedImageType

Input typedefs for the images and transforms.

Definition at line 111 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ImageToImageMetricv4<FixedImageType, MovingImageType, VirtualImageType, RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::ImageMetricType

Definition at line 149 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef InitialTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::InitialTransformPointer

Definition at line 133 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef Transform<RealType, ImageDimension, ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::InitialTransformType

Definition at line 132 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef MetricType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MetricPointer

Definition at line 139 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ImageMetricType::FixedSampledPointSetType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MetricSamplePointSetType

Definition at line 191 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef Array<RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MetricSamplingPercentageArrayType

Definition at line 174 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ObjectToObjectMetricBaseTemplate<RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MetricType

Definition at line 138 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef MovingImageMaskType::ConstPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MovingImageMaskConstPointer

Definition at line 156 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef std::vector<MovingImageMaskConstPointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MovingImageMasksContainerType

Definition at line 157 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ImageMetricType::MovingImageMaskType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MovingImageMaskType

Definition at line 155 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef MovingImageType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MovingImagePointer

Definition at line 118 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef std::vector<MovingImagePointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MovingImagesContainerType

Definition at line 119 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef TMovingImage itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MovingImageType

Definition at line 117 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ObjectToObjectMultiMetricv4<ImageDimension, ImageDimension, VirtualImageType, RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MultiMetricType

Definition at line 148 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef OptimizerType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::OptimizerPointer

Definition at line 183 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ObjectToObjectOptimizerBaseTemplate<RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::OptimizerType

Type of the optimizer.

Definition at line 182 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef OptimizerType::ScalesType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::OptimizerWeightsType

Weights type for the optimizer.

Definition at line 186 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef OutputTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::OutputTransformPointer

Definition at line 127 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef TOutputTransform itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::OutputTransformType

Metric and transform typedefs

Definition at line 126 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef SmartPointer<Self> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::Pointer

Definition at line 101 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef PointSetType::ConstPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::PointSetConstPointer

Definition at line 122 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef PointSetToPointSetMetricv4<PointSetType, PointSetType, RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::PointSetMetricType

Definition at line 150 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef std::vector<PointSetConstPointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::PointSetsContainerType

Definition at line 123 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef TPointSet itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::PointSetType

Definition at line 121 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef OutputTransformType::ScalarType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::RealType

Definition at line 128 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ImageRegistrationMethodv4 itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::Self

Standard class typedefs.

Definition at line 99 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef Array<SizeValueType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::ShrinkFactorsArrayType

Definition at line 171 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ShrinkFilterType::ShrinkFactorsType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::ShrinkFactorsPerDimensionContainerType

Definition at line 169 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ShrinkImageFilter<FixedImageType, VirtualImageType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::ShrinkFilterType

Definition at line 168 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef Array<RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SmoothingSigmasArrayType

Definition at line 173 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ProcessObject itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::Superclass

Definition at line 100 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef TransformParametersAdaptorType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::TransformParametersAdaptorPointer

Definition at line 178 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef std::vector<TransformParametersAdaptorPointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::TransformParametersAdaptorsContainerType

Definition at line 179 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef TransformParametersAdaptorBase<InitialTransformType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::TransformParametersAdaptorType

Transform adaptor typedefs

Definition at line 177 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef Vector<RealType, ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::VectorType

Definition at line 141 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef VirtualImageBaseType::ConstPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::VirtualImageBaseConstPointer

Definition at line 146 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef ImageBase<ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::VirtualImageBaseType

Definition at line 145 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef VirtualImageType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::VirtualImagePointer

Definition at line 144 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

typedef TVirtualImage itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::VirtualImageType

Definition at line 143 of file itkImageRegistrationMethodv4.h.

Member Enumeration Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

enum itk::ImageRegistrationMethodv4::MetricSamplingStrategyType

enum type for metric sampling strategy

Enumerator
NONE
REGULAR
RANDOM

Definition at line 189 of file itkImageRegistrationMethodv4.h.

Constructor & Destructor Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::ImageRegistrationMethodv4 ( )

protected

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::~ImageRegistrationMethodv4 ( )

overrideprotectedvirtual

Member Function Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::AllocateOutputs ( )

protectedvirtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual::itk::LightObject::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, and itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GenerateData ( )

overrideprotectedvirtual

Perform the registration.

Reimplemented from itk::ProcessObject.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, and itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const RealType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetCurrentConvergenceValue ( ) const

virtual

Get the current convergence value. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const SizeValueType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetCurrentIteration ( ) const

virtual

Get the current iteration. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetCurrentLevel ( ) const

virtual

Get the current level. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual VirtualImageBaseConstPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetCurrentLevelVirtualDomainImage ( )

protectedvirtual

Get the virtual domain image from the metric(s)

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const RealType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetCurrentMetricValue ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const FixedImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetFixedImage ( void  ) const

inlinevirtual

Set/get the fixed images.

Definition at line 198 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const FixedImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetFixedImage ( SizeValueType  ) const

virtual

Set/get the fixed images.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetFixedInitialTransform ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetFixedInitialTransformInput ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetFixedInitialTransformInput ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const PointSetType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetFixedPointSet ( ) const

inlinevirtual

Set/get the fixed point sets.

Definition at line 224 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const PointSetType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetFixedPointSet ( SizeValueType  ) const

virtual

Set/get the fixed point sets.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetInitializeCenterOfLinearOutputTransform ( ) const

virtual

Initialize the current linear transform to be optimized with the center of the previous transform in the queue. This provides a much better initialization than the default origin.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetInitialTransform ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetInitialTransformInput ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetInitialTransformInput ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetInPlace ( ) const

virtual

Request that the InitialTransform be grafted onto the output, there by not creating a copy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetInputnumber ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetInputnumber ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetInputnumber ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const bool& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetIsConverged ( ) const

virtual

Get the current convergence state per level. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const MetricType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMetric ( ) const

virtual

Set/Get the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual MetricSamplingPercentageArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMetricSamplingPercentagePerLevel ( ) const

virtual

Set the metric sampling percentage. Valid values are in (0.0,1.0].

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual MetricSamplingStrategyType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMetricSamplingStrategy ( ) const

virtual

Set/Get the metric sampling strategy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual MetricType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetModifiableMetric ( )

virtual

Set/Get the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual OptimizerType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetModifiableOptimizer ( )

virtual

Set/Get the optimizer.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual OutputTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetModifiableTransform ( )

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const MovingImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMovingImage ( void  ) const

inlinevirtual

Set the moving images.

Definition at line 211 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const MovingImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMovingImage ( SizeValueType  ) const

virtual

Set the moving images.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMovingInitialTransform ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMovingInitialTransformInput ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DataObjectDecorator< InitialTransformType >* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMovingInitialTransformInput ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const PointSetType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMovingPointSet ( ) const

inlinevirtual

Set the moving point sets.

Definition at line 237 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const PointSetType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetMovingPointSet ( SizeValueType  ) const

virtual

Set the moving point sets.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const char* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::ProcessObject.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetNumberOfLevels ( ) const

virtual

Set/Get the number of multi-resolution levels. In setting the number of levels we need to set the following for each level:

• shrink factors for the virtual domain
• sigma smoothing parameter
• transform adaptor with specific parameters for the specified level

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const OptimizerType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetOptimizer ( ) const

virtual

Set/Get the optimizer.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual OptimizerWeightsType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetOptimizerWeights ( ) const

virtual

Set/Get the optimizer weights. Allows setting of a per-local-parameter weighting array. If unset, the weights are treated as identity. Weights are used to mask out a particular parameter during optimzation to hold it constant. Or they may be used to apply another kind of prior knowledge. The size of the weights must be equal to the number of the local transformation parameters.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual DecoratedOutputTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetOutput ( )

virtual

Returns the transform resulting from the registration process

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DecoratedOutputTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetOutput ( ) const

virtual

Returns the transform resulting from the registration process

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

ShrinkFactorsPerDimensionContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetShrinkFactorsPerDimension ( const unsigned int  level ) const

inline

Get the shrink factors for a specific level.

Definition at line 355 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetSmoothingSigmasAreSpecifiedInPhysicalUnits ( ) const

virtual

Set/Get whether to specify the smoothing sigmas for each level in physical units (default) or in terms of voxels.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual SmoothingSigmasArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetSmoothingSigmasPerLevel ( ) const

virtual

Set/Get the smoothing sigmas for each level. At each resolution level, a gaussian smoothing filter (specifically, the itkDiscreteGaussianImageFilter) is applied. Sigma values are specified according to the option m_SmoothingSigmasAreSpecifiedInPhysicalUnits.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const OutputTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetTransform ( ) const

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual DecoratedOutputTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetTransformOutput ( )

inlinevirtual

Definition at line 407 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual const DecoratedOutputTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetTransformOutput ( ) const

inlinevirtual

Definition at line 408 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

const TransformParametersAdaptorsContainerType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::GetTransformParametersAdaptorsPerLevel

(

)

const

Set/Get the transform adaptors.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::InitializeCenterOfLinearOutputTransform

(

)

We try to initialize the center of a linear transform (specifically those derived from itk::MatrixOffsetTransformBase). There are a number of checks that we need to make to account for all possible scenarios: 1) we check to make sure the m_OutputTransform is of the appropriate type such that it makes sense to try to center the transform. Local transforms such as SyN and B-spline do not need to be "centered", 2) we check to make sure the composite transform (to which we'll add the m_OutputTransform) is not empty, 3) we look for the first previous transform which has a center parameter, (which, presumably, been optimized beforehand), and

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::InitializeCenterOfLinearOutputTransformOff ( )

virtual

Initialize the current linear transform to be optimized with the center of the previous transform in the queue. This provides a much better initialization than the default origin.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::InitializeCenterOfLinearOutputTransformOn ( )

virtual

Initialize the current linear transform to be optimized with the center of the previous transform in the queue. This provides a much better initialization than the default origin.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::InitializeRegistrationAtEachLevel ( const SizeValueType  )

protectedvirtual

Initialize by setting the interconnects between the components.

Reimplemented in itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, and itk::BSplineSyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::InPlaceOff ( )

virtual

Request that the InitialTransform be grafted onto the output, there by not creating a copy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::InPlaceOn ( )

virtual

Request that the InitialTransform be grafted onto the output, there by not creating a copy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual DataObjectPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MakeOutput ( DataObjectPointerArraySizeType  idx )

overridevirtual

Make a DataObject of the correct type to used as the specified output.

Every ProcessObject subclass must be able to create a DataObject that can be used as a specified output. This method is automatically called when DataObject::DisconnectPipeline() is called. DataObject::DisconnectPipeline, disconnects a data object from being an output of its current source. When the data object is disconnected, the ProcessObject needs to construct a replacement output data object so that the ProcessObject is in a valid state. So DataObject::DisconnectPipeline eventually calls ProcessObject::MakeOutput. Note that MakeOutput always returns a itkSmartPointer to a DataObject. ImageSource and MeshSource override this method to create the correct type of image and mesh respectively. If a filter has multiple outputs of different types, then that filter must provide an implementation of MakeOutput().

Reimplemented from itk::ProcessObject.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

template<typename TTransform >

static void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MakeOutputTransform ( SmartPointer< TTransform > &  ptr )

inlinestaticprivate

Definition at line 551 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

static void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MakeOutputTransform ( SmartPointer< InitialTransformType > &  ptr )

inlinestaticprivate

Definition at line 556 of file itkImageRegistrationMethodv4.h.

References itk::SmartPointer< TObjectType >::GetPointer(), and itk::IdentityTransform< TParametersValueType, NDimensions >::New().

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MetricSamplingReinitializeSeed

(

)

Reinitialize the seed for the random number generators that select the samples for some metric sampling strategies.

By initializing the random number generator seed to a value the same deterministic sampling will be used each Update execution. On the other hand, calling the method ReinitializeSeed() without arguments will use the wall clock in order to have psuedo-random initialization of the seeds. This will indeed increase the non-deterministic behavior of the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::MetricSamplingReinitializeSeed

(

int

seed

)

Reinitialize the seed for the random number generators that select the samples for some metric sampling strategies.

By initializing the random number generator seed to a value the same deterministic sampling will be used each Update execution. On the other hand, calling the method ReinitializeSeed() without arguments will use the wall clock in order to have psuedo-random initialization of the seeds. This will indeed increase the non-deterministic behavior of the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

static Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::New ( )

static

Method for creation through the object factory.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ProcessObject.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >, and itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetFixedImage ( const FixedImageType *  image )

inlinevirtual

Set/get the fixed images.

Definition at line 194 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetFixedImage ( SizeValueType  , const FixedImageType *    )

virtual

Set/get the fixed images.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetFixedInitialTransform ( const InitialTransformType *  _arg )

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetFixedInitialTransformInput ( const DataObjectDecorator< InitialTransformType > *  _arg )

virtual

Set/Get the initial fixed transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetFixedPointSet ( const PointSetType *  pointSet )

inlinevirtual

Set/get the fixed point sets.

Definition at line 220 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetFixedPointSet ( SizeValueType  , const PointSetType *    )

virtual

Set/get the fixed point sets.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetInitializeCenterOfLinearOutputTransform ( bool  _arg )

virtual

Initialize the current linear transform to be optimized with the center of the previous transform in the queue. This provides a much better initialization than the default origin.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetInitialTransform ( const InitialTransformType *  _arg )

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetInitialTransformInput ( const DataObjectDecorator< InitialTransformType > *  _arg )

virtual

Set/Get the initial transform to be optimized

This transform is composed with the MovingInitialTransform to specify the initial transformation from the moving image to the virtual image. It is used for the default parameters, and can be use to specify the transform type.

If the filter has "InPlace" set then this transform will be the output transform object or "grafted" to the output. Otherwise, this InitialTransform will be deep copied or "cloned" to the output.

If this parameter is not set then a default constructed output transform is used.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetInPlace ( bool  _arg )

virtual

Request that the InitialTransform be grafted onto the output, there by not creating a copy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetInputnumber ( const DataObjectDecorator< InitialTransformType > *  _arg )

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetInputnumber ( const DataObjectDecorator< InitialTransformType > *  _arg )

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetInputnumber ( const DataObjectDecorator< InitialTransformType > *  _arg )

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMetric ( MetricType *  _arg )

virtual

Set/Get the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMetricSamplePoints ( )

protectedvirtual

Get metric samples.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMetricSamplingPercentage

(

const RealType

)

Set the metric sampling percentage. Valid values are in (0.0, 1.0]

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMetricSamplingPercentagePerLevel ( const MetricSamplingPercentageArrayType &  samplingPercentages )

virtual

Set the metric sampling percentage. Valid values are in (0.0,1.0].

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMetricSamplingStrategy ( MetricSamplingStrategyType  _arg )

virtual

Set/Get the metric sampling strategy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMovingImage ( const MovingImageType *  image )

inlinevirtual

Set the moving images.

Definition at line 207 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMovingImage ( SizeValueType  , const MovingImageType *    )

virtual

Set the moving images.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMovingInitialTransform ( const InitialTransformType *  _arg )

virtual

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMovingInitialTransformInput ( const DataObjectDecorator< InitialTransformType > *  _arg )

virtual

Set/Get the initial moving transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMovingPointSet ( const PointSetType *  pointSet )

inlinevirtual

Set the moving point sets.

Definition at line 233 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetMovingPointSet ( SizeValueType  , const PointSetType *    )

virtual

Set the moving point sets.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetNumberOfLevels

(

const SizeValueType

)

Set/Get the number of multi-resolution levels. In setting the number of levels we need to set the following for each level:

• shrink factors for the virtual domain
• sigma smoothing parameter
• transform adaptor with specific parameters for the specified level

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetOptimizer ( OptimizerType *  _arg )

virtual

Set/Get the optimizer.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetOptimizerWeights

(

OptimizerWeightsType &

)

Set/Get the optimizer weights. Allows setting of a per-local-parameter weighting array. If unset, the weights are treated as identity. Weights are used to mask out a particular parameter during optimzation to hold it constant. Or they may be used to apply another kind of prior knowledge. The size of the weights must be equal to the number of the local transformation parameters.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetShrinkFactorsPerDimension ( unsigned int  level, ShrinkFactorsPerDimensionContainerType  factors  )

inline

Set the shrink factors for a specific level for each dimension.

Definition at line 368 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetShrinkFactorsPerLevel ( ShrinkFactorsArrayType  factors )

inline

Set the shrink factors for each level where each level has a constant shrink factor for each dimension. For example, input to the function of factors = [4,2,1] will shrink the image in every dimension by 4 the first level, then by 2 at the second level, then the original resolution for the final level (uses the itkShrinkImageFilter).

Definition at line 341 of file itkImageRegistrationMethodv4.h.

References itk::FixedArray< TValue, VLength >::Fill(), and itk::Array< TValue >::Size().

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetSmoothingSigmasAreSpecifiedInPhysicalUnits ( bool  _arg )

virtual

Set/Get whether to specify the smoothing sigmas for each level in physical units (default) or in terms of voxels.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetSmoothingSigmasPerLevel ( SmoothingSigmasArrayType  _arg )

virtual

Set/Get the smoothing sigmas for each level. At each resolution level, a gaussian smoothing filter (specifically, the itkDiscreteGaussianImageFilter) is applied. Sigma values are specified according to the option m_SmoothingSigmasAreSpecifiedInPhysicalUnits.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SetTransformParametersAdaptorsPerLevel

(

TransformParametersAdaptorsContainerType &

)

Set/Get the transform adaptors.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SmoothingSigmasAreSpecifiedInPhysicalUnitsOff ( )

virtual

Set/Get whether to specify the smoothing sigmas for each level in physical units (default) or in terms of voxels.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::SmoothingSigmasAreSpecifiedInPhysicalUnitsOn ( )

virtual

Set/Get whether to specify the smoothing sigmas for each level in physical units (default) or in terms of voxels.

Member Data Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

const unsigned int itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::ImageDimension = TFixedImage::ImageDimension

static

ImageDimension constants

Definition at line 108 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

CompositeTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_CompositeTransform

protected

Definition at line 535 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

RealType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_CurrentConvergenceValue

protected

Definition at line 502 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_CurrentIteration

protected

Definition at line 500 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_CurrentLevel

protected

Definition at line 498 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

RealType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_CurrentMetricValue

protected

Definition at line 501 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

int itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_CurrentRandomSeed

protected

Definition at line 530 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

int itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_FirstImageMetricIndex

protected

Definition at line 523 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

FixedImageMasksContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_FixedImageMasks

protected

Definition at line 507 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

PointSetsContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_FixedPointSets

protected

Definition at line 510 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

FixedImagesContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_FixedSmoothImages

protected

Definition at line 505 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_InitializeCenterOfLinearOutputTransform

private

Definition at line 547 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_InPlace

private

Definition at line 543 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_IsConverged

protected

Definition at line 503 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

MetricPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_Metric

protected

Definition at line 519 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

MetricSamplingPercentageArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_MetricSamplingPercentagePerLevel

protected

Definition at line 521 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

MetricSamplingStrategyType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_MetricSamplingStrategy

protected

Definition at line 520 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

MovingImageMasksContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_MovingImageMasks

protected

Definition at line 508 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

PointSetsContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_MovingPointSets

protected

Definition at line 511 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

MovingImagesContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_MovingSmoothImages

protected

Definition at line 506 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_NumberOfFixedObjects

protected

Definition at line 512 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_NumberOfLevels

protected

Definition at line 499 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_NumberOfMetrics

protected

Definition at line 522 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_NumberOfMovingObjects

protected

Definition at line 513 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

OptimizerPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_Optimizer

protected

Definition at line 515 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

OptimizerWeightsType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_OptimizerWeights

protected

Definition at line 516 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_OptimizerWeightsAreIdentity

protected

Definition at line 517 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

OutputTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_OutputTransform

protected

Definition at line 539 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

int itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_RandomSeed

protected

Definition at line 529 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_ReseedIterator

protected

Definition at line 528 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

std::vector<ShrinkFactorsPerDimensionContainerType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_ShrinkFactorsPerLevel

protected

Definition at line 524 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_SmoothingSigmasAreSpecifiedInPhysicalUnits

protected

Definition at line 526 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

SmoothingSigmasArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_SmoothingSigmasPerLevel

protected

Definition at line 525 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

TransformParametersAdaptorsContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_TransformParametersAdaptorsPerLevel

protected

Definition at line 533 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform = Transform<double, TFixedImage::ImageDimension, TFixedImage::ImageDimension>, typename TVirtualImage = TFixedImage, typename TPointSet = PointSet<unsigned int, TFixedImage::ImageDimension>>

VirtualImagePointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform, TVirtualImage, TPointSet >::m_VirtualDomainImage

protected

Definition at line 509 of file itkImageRegistrationMethodv4.h.

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The documentation for this class was generated from the following file:

• itkImageRegistrationMethodv4.h