ITK
4.13.0
Insight Segmentation and Registration Toolkit
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#include <itkLesionSegmentationImageFilter8.h>
Definition at line 45 of file itkLesionSegmentationImageFilter8.h.
Static Public Member Functions | |
static Pointer | New () |
Static Public Member Functions inherited from itk::Object | |
static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool flag) |
Static Public Member Functions inherited from itk::LightObject | |
static void | BreakOnError () |
static Pointer | New () |
Static Public Attributes | |
static const unsigned int | ImageDimension = TInputImage::ImageDimension |
static const unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage > | |
static const unsigned int | InputImageDimension = TInputImage::ImageDimension |
static const unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
Static Public Attributes inherited from itk::ImageSource< TOutputImage > | |
static const unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
Private Member Functions | |
virtual | ~LesionSegmentationImageFilter8 () |
Additional Inherited Members | |
Static Protected Member Functions inherited from itk::ImageSource< TOutputImage > | |
static const ImageRegionSplitterBase * | GetGlobalDefaultSplitter () |
static ITK_THREAD_RETURN_TYPE | ThreaderCallback (void *arg) |
Protected Attributes inherited from itk::ProcessObject | |
TimeStamp | m_OutputInformationMTime |
bool | m_Updating |
Protected Attributes inherited from itk::LightObject | |
AtomicInt< int > | m_ReferenceCount |
typedef CannyEdgesFeatureGenerator< ImageDimension > itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::CannyEdgesFeatureGeneratorType |
Definition at line 84 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 181 of file itkLesionSegmentationImageFilter8.h.
typedef SmartPointer<const Self> itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::ConstPointer |
Definition at line 59 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 174 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 172 of file itkLesionSegmentationImageFilter8.h.
typedef TInputImage::IndexType itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::IndexType |
Definition at line 64 of file itkLesionSegmentationImageFilter8.h.
typedef TInputImage::PixelType itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::InputImagePixelType |
Define pixel types.
Definition at line 62 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 177 of file itkLesionSegmentationImageFilter8.h.
typedef TInputImage itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::InputImageType |
Image typedef support
Definition at line 54 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 178 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 168 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 170 of file itkLesionSegmentationImageFilter8.h.
typedef TOutputImage::PixelType itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::OutputImagePixelType |
Definition at line 63 of file itkLesionSegmentationImageFilter8.h.
typedef TOutputImage::RegionType itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::OutputImageRegionType |
Typedef to describe the output image region type.
Definition at line 68 of file itkLesionSegmentationImageFilter8.h.
typedef TOutputImage itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::OutputImageType |
Definition at line 55 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 176 of file itkLesionSegmentationImageFilter8.h.
typedef SmartPointer<Self> itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::Pointer |
SmartPointer typedef support
Definition at line 58 of file itkLesionSegmentationImageFilter8.h.
typedef SeedSpatialObjectType::PointListType itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::PointListType |
Definition at line 138 of file itkLesionSegmentationImageFilter8.h.
typedef TOutputImage::RegionType itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::RegionType |
Definition at line 72 of file itkLesionSegmentationImageFilter8.h.
typedef itk::LandmarkSpatialObject< ImageDimension > itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::SeedSpatialObjectType |
Definition at line 134 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 173 of file itkLesionSegmentationImageFilter8.h.
typedef LesionSegmentationImageFilter8 itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::Self |
Standard "Self" & Superclass typedef.
Definition at line 50 of file itkLesionSegmentationImageFilter8.h.
typedef CannyEdgesFeatureGeneratorType::SigmaArrayType itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::SigmaArrayType |
Definition at line 85 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 171 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 179 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 180 of file itkLesionSegmentationImageFilter8.h.
typedef InputImageType::SpacingType itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::SpacingType |
Definition at line 65 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 175 of file itkLesionSegmentationImageFilter8.h.
typedef ImageToImageFilter<TInputImage, TOutputImage> itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::Superclass |
Definition at line 51 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 169 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 161 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 185 of file itkLesionSegmentationImageFilter8.h.
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Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::Object.
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A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.
Reimplemented from itk::ImageSource< TOutputImage >.
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What is the input requested region that is required to produce the output requested region? The base assumption for image processing filters is that the input requested region can be set to match the output requested region. If a filter requires more input (for instance a filter that uses neighborhoods needs more input than output to avoid introducing artificial boundary conditions) or less input (for instance a magnify filter) will have to override this method. In doing so, it should call its superclass' implementation as its first step. Note that imaging filters operate differently than the classes to this point in the class hierarchy. Up till now, the base assumption has been that the largest possible region will be requested of the input.
This implementation of GenerateInputRequestedRegion() only processes the inputs that are a subclass of the ImageBase<InputImageDimension>. If an input is another type of DataObject (including an Image of a different dimension), they are skipped by this method. The subclasses of ImageToImageFilter are responsible for providing an implementation of GenerateInputRequestedRegion() when there are multiple inputs of different types.
Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.
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Generate the information describing the output data. The default implementation of this method will copy information from the input to the output. A filter may override this method if its output will have different information than its input. For instance, a filter that shrinks an image will need to provide an implementation for this method that changes the spacing of the pixels. Such filters should call their superclass' implementation of this method prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.
Reimplemented from itk::ProcessObject.
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If ResampleThickSliceData is ON, set the maximum anisotropy. Defauls to twice the minimum spacing of the data. That will mean that 0.7 x 0.7 x 1.25 mm CT data will not be resampled. However 0.7 x 0.7 x 2.5 mm CT data will be resampled to 0.7 x 0.7 x 1.25 mm thick slices. Values less than 1.0 result in supersampling of the data. A value of 1 results in Isotropic resampling of the data.
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Run-time type information (and related methods).
Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.
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Begin concept checking End concept checking Set the ROI
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Turn On/Off isotropic resampling prior to running the segmentation
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Definition at line 141 of file itkLesionSegmentationImageFilter8.h.
References itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::m_Seeds.
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Set the beta for the sigmoid intensity feature
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Definition at line 147 of file itkLesionSegmentationImageFilter8.h.
References itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::m_StatusMessage.
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Method for creation through the object factory.
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Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.
void itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::ProgressUpdate | ( | Object * | caller, |
const EventObject & | event | ||
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Report progress
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Turn On/Off isotropic resampling prior to running the segmentation
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Turn On/Off isotropic resampling prior to running the segmentation
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Override the superclass implementation so as to set the flag on all the filters within our lesion segmentation pipeline
Reimplemented from itk::ProcessObject.
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If ResampleThickSliceData is ON, set the maximum anisotropy. Defauls to twice the minimum spacing of the data. That will mean that 0.7 x 0.7 x 1.25 mm CT data will not be resampled. However 0.7 x 0.7 x 2.5 mm CT data will be resampled to 0.7 x 0.7 x 1.25 mm thick slices. Values less than 1.0 result in supersampling of the data. A value of 1 results in Isotropic resampling of the data.
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Begin concept checking End concept checking Set the ROI
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Turn On/Off isotropic resampling prior to running the segmentation
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Definition at line 140 of file itkLesionSegmentationImageFilter8.h.
References itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::m_Seeds.
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Set the beta for the sigmoid intensity feature
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Turn On/Off the use of vessel enhancing diffusion (R. Manniesing et al) prior to computing the vesselness. This is slow. Defaults to false.
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Turn On/Off the use of vessel enhancing diffusion (R. Manniesing et al) prior to computing the vesselness. This is slow. Defaults to false.
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Turn On/Off the use of vessel enhancing diffusion (R. Manniesing et al) prior to computing the vesselness. This is slow. Defaults to false.
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ImageDimension constant
Definition at line 79 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 206 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 195 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 200 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 198 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 189 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 188 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 196 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 204 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 199 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 191 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 192 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 201 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 205 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 203 of file itkLesionSegmentationImageFilter8.h.
Referenced by itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::GetSeeds(), and itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::SetSeeds().
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Definition at line 197 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 185 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 194 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 202 of file itkLesionSegmentationImageFilter8.h.
Referenced by itk::LesionSegmentationImageFilter8< TInputImage, TOutputImage >::GetStatusMessage().
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Definition at line 207 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 193 of file itkLesionSegmentationImageFilter8.h.
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Definition at line 82 of file itkLesionSegmentationImageFilter8.h.