#include <itkPDEDeformableRegistrationFilter.h>

Inheritance diagram for itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Collaboration diagram for itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>
class itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

Deformably register two images using a PDE algorithm.

PDEDeformableRegistrationFilter is a base case for filter implementing a PDE deformable algorithm that register two images by computing the displacement field which will map a moving image onto a fixed image.

A displacement field is represented as a image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.

This class is templated over the fixed image type, moving image type and the displacement Field type.

The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial displacement field maybe set via SetInitialDisplacementField or SetInput. If no initial field is set, a zero field is used as the initial condition.

The output displacement field can be obtained via methods GetOutput or GetDisplacementField.

The PDE algorithm is run for a user defined number of iterations. Typically the PDE algorithm requires period Gaussin smoothing of the displacement field to enforce an elastic-like condition. The amount of smoothing is governed by a set of user defined standard deviations (one for each dimension).

In terms of memory, this filter keeps two internal buffers: one for storing the intermediate updates to the field and one for double-buffering when smoothing the displacement field. Both buffers are the same type and size as the output displacement field.

This class make use of the finite difference solver hierarchy. Update for each iteration is computed using a PDEDeformableRegistrationFunction.

Warning: This filter assumes that the fixed image type, moving image type and displacement field type all have the same number of dimensions.

See Also: PDEDeformableRegistrationFunction.

Definition at line 73 of file itkPDEDeformableRegistrationFilter.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer

typedef DisplacementFieldType::Pointer	DisplacementFieldPointer

typedef TDisplacementField	DisplacementFieldType

typedef Superclass::FiniteDifferenceFunctionType	FiniteDifferenceFunctionType

typedef FixedImageType::ConstPointer	FixedImageConstPointer

typedef FixedImageType::Pointer	FixedImagePointer

typedef TFixedImage	FixedImageType

typedef MovingImageType::ConstPointer	MovingImageConstPointer

typedef MovingImageType::Pointer	MovingImagePointer

typedef TMovingImage	MovingImageType

typedef Superclass::OutputImageType	OutputImageType

typedef PDEDeformableRegistrationFunction < FixedImageType, MovingImageType, DisplacementFieldType >	PDEDeformableRegistrationFunctionType

typedef SmartPointer< Self >	Pointer

typedef PDEDeformableRegistrationFilter	Self

typedef FixedArray< double, ImageDimension >	StandardDeviationsType

typedef DenseFiniteDifferenceImageFilter < TDisplacementField, TDisplacementField >	Superclass

Public Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::FiniteDifferenceFunctionType	FiniteDifferenceFunctionType

typedef Superclass::InputImageType	InputImageType

typedef Superclass::OutputImageType	OutputImageType

typedef Superclass::PixelType	PixelType

typedef SmartPointer< Self >	Pointer

typedef DenseFiniteDifferenceImageFilter	Self

typedef FiniteDifferenceImageFilter < TDisplacementField, TDisplacementField >	Superclass

typedef Superclass::TimeStepType	TimeStepType

typedef OutputImageType	UpdateBufferType

Public Types inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const Self >	ConstPointer

typedef FiniteDifferenceFunction < TDisplacementField >	FiniteDifferenceFunctionType

typedef TDisplacementField	InputImageType

typedef TDisplacementField::PixelType	InputPixelType

typedef NumericTraits < InputPixelType >::ValueType	InputPixelValueType

typedef FiniteDifferenceFunctionType::NeighborhoodScalesType	NeighborhoodScalesType

typedef TDisplacementField	OutputImageType

typedef TDisplacementField::PixelType	OutputPixelType

typedef NumericTraits < OutputPixelType >::ValueType	OutputPixelValueType

typedef OutputPixelType	PixelType

typedef SmartPointer< Self >	Pointer

typedef FiniteDifferenceFunctionType::RadiusType	RadiusType

typedef FiniteDifferenceImageFilter	Self

typedef InPlaceImageFilter < TDisplacementField, TDisplacementField >	Superclass

typedef FiniteDifferenceFunctionType::TimeStepType	TimeStepType

Public Types inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const Self >	ConstPointer

typedef InputImageType::ConstPointer	InputImageConstPointer

typedef InputImageType::PixelType	InputImagePixelType

typedef InputImageType::Pointer	InputImagePointer

typedef InputImageType::RegionType	InputImageRegionType

typedef TDisplacementField	InputImageType

typedef Superclass::OutputImagePixelType	OutputImagePixelType

typedef Superclass::OutputImagePointer	OutputImagePointer

typedef Superclass::OutputImageRegionType	OutputImageRegionType

typedef Superclass::OutputImageType	OutputImageType

typedef SmartPointer< Self >	Pointer

typedef InPlaceImageFilter	Self

typedef ImageToImageFilter < TDisplacementField, TDisplacementField >	Superclass

Public Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const Self >	ConstPointer

typedef InputImageType::ConstPointer	InputImageConstPointer

typedef InputImageType::PixelType	InputImagePixelType

typedef InputImageType::Pointer	InputImagePointer

typedef InputImageType::RegionType	InputImageRegionType

typedef TDisplacementField	InputImageType

typedef Superclass::OutputImagePixelType	OutputImagePixelType

typedef Superclass::OutputImageRegionType	OutputImageRegionType

typedef SmartPointer< Self >	Pointer

typedef ImageToImageFilter	Self

typedef ImageSource < TDisplacementField >	Superclass

Public Types inherited from itk::ImageSource< TDisplacementField >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DataObjectIdentifierType	DataObjectIdentifierType

typedef DataObject::Pointer	DataObjectPointer

typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType

typedef OutputImageType::PixelType	OutputImagePixelType

typedef OutputImageType::Pointer	OutputImagePointer

typedef OutputImageType::RegionType	OutputImageRegionType

typedef TDisplacementField	OutputImageType

typedef SmartPointer< Self >	Pointer

typedef ImageSource	Self

typedef ProcessObject	Superclass

Public Types inherited from itk::ProcessObject
typedef SmartPointer< const Self >	ConstPointer

typedef DataObject::DataObjectIdentifierType	DataObjectIdentifierType

typedef DataObject::Pointer	DataObjectPointer

typedef std::vector < DataObjectPointer >	DataObjectPointerArray

typedef DataObjectPointerArray::size_type	DataObjectPointerArraySizeType

typedef MultiThreader	MultiThreaderType

typedef std::vector < DataObjectIdentifierType >	NameArray

typedef SmartPointer< Self >	Pointer

typedef ProcessObject	Self

typedef Object	Superclass

Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef Object	Self

typedef LightObject	Superclass

Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef LightObject	Self

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const

DisplacementFieldType *	GetDisplacementField ()

virtual const FixedImageType *	GetFixedImage () const

virtual const DisplacementFieldType *	GetInitialDisplacementField () const

virtual const MovingImageType *	GetMovingImage () const

virtual const char *	GetNameOfClass () const

virtual std::vector < SmartPointer< DataObject > >::size_type	GetNumberOfValidRequiredInputs () const override

virtual const StandardDeviationsType &	GetStandardDeviations () const

virtual const StandardDeviationsType &	GetUpdateFieldStandardDeviations () const

virtual void	SetFixedImage (const FixedImageType *input)

virtual void	SetInitialDisplacementField (const DisplacementFieldType *input)

virtual void	SetMovingImage (const MovingImageType *input)

virtual void	StopRegistration ()


virtual void	SetSmoothDisplacementField (bool _arg)

virtual bool	GetSmoothDisplacementField () const

virtual void	SmoothDisplacementFieldOn ()

virtual void	SmoothDisplacementFieldOff ()


virtual void	SetStandardDeviations (StandardDeviationsType _arg)

virtual void	SetStandardDeviations (double value)


virtual void	SetSmoothUpdateField (bool _arg)

virtual bool	GetSmoothUpdateField () const

virtual void	SmoothUpdateFieldOn ()

virtual void	SmoothUpdateFieldOff ()


virtual void	SetUpdateFieldStandardDeviations (StandardDeviationsType _arg)

virtual void	SetUpdateFieldStandardDeviations (double value)


virtual void	SetMaximumError (double _arg)

virtual double	GetMaximumError () const


virtual void	SetMaximumKernelWidth (unsigned int _arg)

virtual unsigned int	GetMaximumKernelWidth () const

Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual const FiniteDifferenceFunctionType::Pointer &	GetDifferenceFunction () const

virtual const IdentifierType &	GetElapsedIterations () const

virtual bool	GetIsInitialized ()

virtual void	SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)

virtual void	SetIsInitialized (bool _arg)

void	SetStateToInitialized ()

void	SetStateToUninitialized ()

virtual void	SetNumberOfIterations (IdentifierType _arg)

virtual const IdentifierType &	GetNumberOfIterations () const

virtual void	SetUseImageSpacing (bool _arg)

virtual void	UseImageSpacingOn ()

virtual void	UseImageSpacingOff ()

virtual const bool &	GetUseImageSpacing () const

virtual void	SetMaximumRMSError (double _arg)

virtual const double &	GetMaximumRMSError () const

virtual void	SetRMSChange (double _arg)

virtual const double &	GetRMSChange () const

virtual void	SetManualReinitialization (bool _arg)

virtual const bool &	GetManualReinitialization () const

virtual void	ManualReinitializationOn ()

virtual void	ManualReinitializationOff ()

Public Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual bool	CanRunInPlace () const

virtual void	SetInPlace (bool _arg)

virtual bool	GetInPlace () const

virtual void	InPlaceOn ()

virtual void	InPlaceOff ()

Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
const InputImageType *	GetInput () const

const InputImageType *	GetInput (unsigned int idx) const

virtual void	PopBackInput () override

virtual void	PopFrontInput () override

virtual void	PushBackInput (const InputImageType *image)

virtual void	PushFrontInput (const InputImageType *image)

virtual void	SetInput (const InputImageType *image)

virtual void	SetInput (unsigned int, const TDisplacementField *image)

virtual void	SetCoordinateTolerance (double _arg)

virtual double	GetCoordinateTolerance () const

virtual void	SetDirectionTolerance (double _arg)

virtual double	GetDirectionTolerance () const

Public Member Functions inherited from itk::ImageSource< TDisplacementField >
OutputImageType *	GetOutput (unsigned int idx)

virtual void	GraftNthOutput (unsigned int idx, DataObject *output)

virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *output)

OutputImageType *	GetOutput ()

const OutputImageType *	GetOutput () const

virtual void	GraftOutput (DataObject *output)

virtual ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override

virtual ProcessObject::DataObjectPointer	MakeOutput (const ProcessObject::DataObjectIdentifierType &) override

Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()

virtual void	AbortGenerateDataOn ()

virtual void	EnlargeOutputRequestedRegion (DataObject *)

virtual const bool &	GetAbortGenerateData () const

DataObjectPointerArray	GetIndexedInputs ()

DataObjectPointerArray	GetIndexedOutputs ()

NameArray	GetInputNames () const

DataObjectPointerArray	GetInputs ()

MultiThreaderType *	GetMultiThreader () const

DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const

DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const

DataObjectPointerArraySizeType	GetNumberOfInputs () const

DataObjectPointerArraySizeType	GetNumberOfOutputs () const

NameArray	GetOutputNames () const

DataObjectPointerArray	GetOutputs ()

virtual const float &	GetProgress () const

NameArray	GetRequiredInputNames () const

bool	HasInput (const DataObjectIdentifierType &key) const

bool	HasOutput (const DataObjectIdentifierType &key) const

virtual void	PrepareOutputs ()

virtual void	PropagateRequestedRegion (DataObject *output)

virtual void	ResetPipeline ()

virtual void	SetAbortGenerateData (bool _arg)

virtual void	Update ()

virtual void	UpdateLargestPossibleRegion ()

virtual void	UpdateOutputData (DataObject *output)

virtual void	UpdateOutputInformation ()

void	UpdateProgress (float progress)

void	SetProgress (float progress)

virtual void	SetReleaseDataFlag (bool flag)

virtual bool	GetReleaseDataFlag () const

void	ReleaseDataFlagOn ()

void	ReleaseDataFlagOff ()

virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)

virtual const bool &	GetReleaseDataBeforeUpdateFlag () const

virtual void	ReleaseDataBeforeUpdateFlagOn ()

virtual void	ReleaseDataBeforeUpdateFlagOff ()

virtual void	SetNumberOfThreads (ThreadIdType _arg)

virtual const ThreadIdType &	GetNumberOfThreads () const

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

virtual void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

virtual void	SetReferenceCount (int) override

virtual void	UnRegister () const noexceptoverride

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
virtual void	Delete ()

virtual int	GetReferenceCount () const

	itkCloneMacro (Self)

void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool flag)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Public Attributes
static const unsigned int	ImageDimension = Superclass::ImageDimension

Static Public Attributes inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int	ImageDimension

Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int	ImageDimension

Static Public Attributes inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int	InputImageDimension

static const unsigned int	OutputImageDimension

Static Public Attributes inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int	InputImageDimension

static const unsigned int	OutputImageDimension

Static Public Attributes inherited from itk::ImageSource< TDisplacementField >
static const unsigned int	OutputImageDimension

Protected Member Functions
virtual void	CopyInputToOutput () override

virtual void	GenerateInputRequestedRegion () override

virtual void	GenerateOutputInformation () override

virtual bool	Halt () override

virtual void	Initialize () override

virtual void	InitializeIteration () override

	PDEDeformableRegistrationFilter ()

virtual void	PostProcessOutput () override

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	SmoothDisplacementField ()

virtual void	SmoothUpdateField ()

	~PDEDeformableRegistrationFilter () override

Protected Member Functions inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual void	AllocateUpdateBuffer () override

virtual void	ApplyUpdate (const TimeStepType &dt) override

virtual TimeStepType	CalculateChange () override

	DenseFiniteDifferenceImageFilter ()

virtual UpdateBufferType *	GetUpdateBuffer ()

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	ThreadedApplyUpdate (const TimeStepType &dt, const ThreadRegionType &regionToProcess, ThreadIdType threadId)

virtual TimeStepType	ThreadedCalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)

	~DenseFiniteDifferenceImageFilter () override

Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual void	ApplyUpdate (const TimeStepType &dt)=0

	FiniteDifferenceImageFilter ()

virtual void	GenerateData () override

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual TimeStepType	ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const

virtual void	SetElapsedIterations (IdentifierType _arg)

virtual bool	ThreadedHalt (void *)

virtual	~FiniteDifferenceImageFilter () override

Protected Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual void	AllocateOutputs () override

virtual bool	GetRunningInPlace () const

	InPlaceImageFilter ()

virtual void	ReleaseInputs () override

	~InPlaceImageFilter () override

Protected Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)

virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)

	ImageToImageFilter ()

virtual void	VerifyInputInformation () override

	~ImageToImageFilter () override

void	PushBackInput (const DataObject *input) override

void	PushFrontInput (const DataObject *input) override

Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
virtual void	AfterThreadedGenerateData ()

virtual void	BeforeThreadedGenerateData ()

virtual const ImageRegionSplitterBase *	GetImageRegionSplitter () const

	ImageSource ()

virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)

virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)

virtual	~ImageSource () override

Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)

void	AddOptionalInputName (const DataObjectIdentifierType &)

void	AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

virtual void	AddOutput (DataObject *output)

bool	AddRequiredInputName (const DataObjectIdentifierType &)

bool	AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

virtual void	CacheInputReleaseDataFlags ()

virtual void	GenerateOutputRequestedRegion (DataObject *output)

DataObject *	GetInput (const DataObjectIdentifierType &key)

const DataObject *	GetInput (const DataObjectIdentifierType &key) const

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs () const

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs () const

bool	IsIndexedInputName (const DataObjectIdentifierType &) const

bool	IsIndexedOutputName (const DataObjectIdentifierType &) const

bool	IsRequiredInputName (const DataObjectIdentifierType &) const

	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))

	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))

	itkLegacyMacro (virtual void RemoveInput(DataObject *input))

	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))

DataObjectPointerArraySizeType	MakeIndexFromInputName (const DataObjectIdentifierType &name) const

DataObjectPointerArraySizeType	MakeIndexFromOutputName (const DataObjectIdentifierType &name) const

DataObjectIdentifierType	MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const

DataObjectIdentifierType	MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const

	ProcessObject ()

virtual void	PropagateResetPipeline ()

virtual void	RemoveInput (const DataObjectIdentifierType &key)

virtual void	RemoveInput (DataObjectPointerArraySizeType)

virtual void	RemoveOutput (const DataObjectIdentifierType &key)

virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)

bool	RemoveRequiredInputName (const DataObjectIdentifierType &)

virtual void	RestoreInputReleaseDataFlags ()

virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)

virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)

virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)

void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)

void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)

virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)

virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)

virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)

virtual void	SetPrimaryInput (DataObject *input)

virtual void	SetPrimaryOutput (DataObject *output)

void	SetRequiredInputNames (const NameArray &)

virtual void	VerifyPreconditions ()

	~ProcessObject () override

DataObject *	GetInput (DataObjectPointerArraySizeType idx)

const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const

DataObject *	GetPrimaryInput ()

const DataObject *	GetPrimaryInput () const

virtual void	SetPrimaryInputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryInputName (void) const

DataObject *	GetOutput (const DataObjectIdentifierType &key)

const DataObject *	GetOutput (const DataObjectIdentifierType &key) const

virtual void	SetPrimaryOutputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryOutputName (void) const

DataObject *	GetOutput (DataObjectPointerArraySizeType idx)

const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const

DataObject *	GetPrimaryOutput ()

const DataObject *	GetPrimaryOutput () const

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &time)

virtual	~Object () override

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Private Attributes
double	m_MaximumError

unsigned int	m_MaximumKernelWidth

bool	m_SmoothDisplacementField

bool	m_SmoothUpdateField

StandardDeviationsType	m_StandardDeviations

bool	m_StopRegistrationFlag

DisplacementFieldPointer	m_TempField

StandardDeviationsType	m_UpdateFieldStandardDeviations

Additional Inherited Members
Protected Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef UpdateBufferType::RegionType	ThreadRegionType

Protected Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension) >	InputToOutputRegionCopierType

typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension) >	OutputToInputRegionCopierType

Static Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
static const ImageRegionSplitterBase *	GetGlobalDefaultSplitter ()

static ITK_THREAD_RETURN_TYPE	ThreaderCallback (void *arg)

Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
IdentifierType	m_ElapsedIterations

bool	m_IsInitialized

bool	m_ManualReinitialization

double	m_MaximumRMSError

IdentifierType	m_NumberOfIterations

double	m_RMSChange

Protected Attributes inherited from itk::ProcessObject
TimeStamp	m_OutputInformationMTime

bool	m_Updating

Protected Attributes inherited from itk::LightObject
AtomicInt< int >	m_ReferenceCount

Member Typedef Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef SmartPointer< const Self > itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ConstPointer

Definition at line 82 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef DisplacementFieldType::Pointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldPointer

Definition at line 103 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef TDisplacementField itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldType

Deformation field type.

Definition at line 102 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef Superclass::FiniteDifferenceFunctionType itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FiniteDifferenceFunctionType

FiniteDifferenceFunction type.

Definition at line 115 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef FixedImageType::ConstPointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImageConstPointer

Definition at line 94 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef FixedImageType::Pointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImagePointer

Definition at line 93 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef TFixedImage itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImageType

FixedImage image type.

Definition at line 89 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef MovingImageType::ConstPointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImageConstPointer

Definition at line 99 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef MovingImageType::Pointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImagePointer

Definition at line 98 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef TMovingImage itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImageType

MovingImage image type.

Definition at line 97 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef Superclass::OutputImageType itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::OutputImageType

Types inherithed from the superclass

Definition at line 111 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef PDEDeformableRegistrationFunction< FixedImageType, MovingImageType, DisplacementFieldType > itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PDEDeformableRegistrationFunctionType

PDEDeformableRegistrationFilterFunction type.

Definition at line 119 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef SmartPointer< Self > itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Pointer

Definition at line 81 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef PDEDeformableRegistrationFilter itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Self

Standard class typedefs.

Definition at line 79 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef FixedArray< double, ImageDimension > itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::StandardDeviationsType

Definition at line 174 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

typedef DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField > itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Superclass

Definition at line 80 of file itkPDEDeformableRegistrationFilter.h.

Constructor & Destructor Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PDEDeformableRegistrationFilter ( )

protected

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::~PDEDeformableRegistrationFilter ( )

inlineoverrideprotected

Definition at line 247 of file itkPDEDeformableRegistrationFilter.h.

Member Function Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::CopyInputToOutput ( )

overrideprotectedvirtual

A simple method to copy the data from the input to the output. If the input does not exist, a zero field is written to the output.

Reimplemented from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual::itk::LightObject::Pointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

Reimplemented in itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GenerateInputRequestedRegion ( )

overrideprotectedvirtual

It is difficult to compute in advance the input moving image region required to compute the requested output region. Thus the safest thing to do is to request for the whole moving image.

For the fixed image and displacement field, the input requested region set to be the same as that of the output requested region.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GenerateOutputInformation ( )

overrideprotectedvirtual

By default the output displacement field has the same Spacing, Origin and LargestPossibleRegion as the input/initial displacement field. If the initial displacement field is not set, the output information is copied from the fixed image.

Reimplemented from itk::ProcessObject.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

DisplacementFieldType* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetDisplacementField ( void )

inline

Get output displacement field.

Definition at line 144 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual const FixedImageType* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetFixedImage ( ) const

virtual

Get the fixed image.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual const DisplacementFieldType* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetInitialDisplacementField ( ) const

virtual

Get initial displacement field.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual double itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMaximumError ( ) const

virtual

Set/Get the desired maximum error of the Gaussian kernel approximate.

See Also: GaussianOperator.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual unsigned int itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMaximumKernelWidth ( ) const

virtual

Set/Get the desired limits of the Gaussian kernel width.

See Also: GaussianOperator.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual const MovingImageType* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMovingImage ( ) const

virtual

Get the moving image.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual const char* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods)

Reimplemented from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

Reimplemented in itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, and itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual std::vector< SmartPointer< DataObject > >::size_type itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetNumberOfValidRequiredInputs ( ) const

overridevirtual

Get the number of valid inputs. For PDEDeformableRegistration, this checks whether the fixed and moving images have been set. While PDEDeformableRegistration can take a third input as an initial displacement field, this input is not a required input.

Reimplemented from itk::ProcessObject.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetSmoothDisplacementField ( ) const

virtual

Set/Get whether the displacement field is smoothed (regularized). Smoothing the displacement yields a solution elastic in nature. If SmoothDisplacementField is on, then the displacement field is smoothed with a Gaussian whose standard deviations are specified with SetStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetSmoothUpdateField ( ) const

virtual

Set/Get whether the update field is smoothed (regularized). Smoothing the update field yields a solution viscous in nature. If SmoothUpdateField is on, then the update field is smoothed with a Gaussian whose standard deviations are specified with SetUpdateFieldStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual const StandardDeviationsType& itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetStandardDeviations ( ) const

virtual

Get the Gaussian smoothing standard deviations use for smoothing the displacement field.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual const StandardDeviationsType& itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetUpdateFieldStandardDeviations ( ) const

virtual

Get the Gaussian smoothing standard deviations used for smoothing the update field.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Halt ( )

inlineoverrideprotectedvirtual

Supplies the halting criteria for this class of filters. The algorithm will stop after a user-specified number of iterations.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

Reimplemented in itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

Definition at line 252 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Initialize ( )

overrideprotectedvirtual

This method is called before iterating the solution.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

Reimplemented in itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::InitializeIteration ( )

overrideprotectedvirtual

Initialize the state of filter and equation before each iteration. Progress feeback is implemented as part of this method.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

Reimplemented in itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, and itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

static Pointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::New ( )

static

Method for creation through the object factory.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PostProcessOutput ( )

overrideprotectedvirtual

This method is called after the solution has been generated. In this case, the filter release the memory of the internal buffers.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >.

Reimplemented in itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetFixedImage ( const FixedImageType * input )

virtual

Set the fixed image.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetInitialDisplacementField ( const DisplacementFieldType * input )

virtual

Set initial displacement field.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetMaximumError ( double _arg )

virtual

Set/Get the desired maximum error of the Gaussian kernel approximate.

See Also: GaussianOperator.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetMaximumKernelWidth ( unsigned int _arg )

virtual

Set/Get the desired limits of the Gaussian kernel width.

See Also: GaussianOperator.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetMovingImage ( const MovingImageType * input )

virtual

Set the moving image.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetSmoothDisplacementField ( bool _arg )

virtual

Set/Get whether the displacement field is smoothed (regularized). Smoothing the displacement yields a solution elastic in nature. If SmoothDisplacementField is on, then the displacement field is smoothed with a Gaussian whose standard deviations are specified with SetStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetSmoothUpdateField ( bool _arg )

virtual

Set/Get whether the update field is smoothed (regularized). Smoothing the update field yields a solution viscous in nature. If SmoothUpdateField is on, then the update field is smoothed with a Gaussian whose standard deviations are specified with SetUpdateFieldStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetStandardDeviations ( StandardDeviationsType _arg )

virtual

Set the Gaussian smoothing standard deviations for the displacement field. The values are set with respect to pixel coordinates.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetStandardDeviations ( double value )

virtual

Set the Gaussian smoothing standard deviations for the displacement field. The values are set with respect to pixel coordinates.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetUpdateFieldStandardDeviations ( StandardDeviationsType _arg )

virtual

Set the Gaussian smoothing standard deviations for the update field. The values are set with respect to pixel coordinates.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetUpdateFieldStandardDeviations ( double value )

virtual

Set the Gaussian smoothing standard deviations for the update field. The values are set with respect to pixel coordinates.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothDisplacementField ( )

protectedvirtual

Utility to smooth the displacement field (represented in the Output) using a Gaussian operator. The amount of smoothing can be specified by setting the StandardDeviations.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothDisplacementFieldOff ( )

virtual

Set/Get whether the displacement field is smoothed (regularized). Smoothing the displacement yields a solution elastic in nature. If SmoothDisplacementField is on, then the displacement field is smoothed with a Gaussian whose standard deviations are specified with SetStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothDisplacementFieldOn ( )

virtual

Set/Get whether the displacement field is smoothed (regularized). Smoothing the displacement yields a solution elastic in nature. If SmoothDisplacementField is on, then the displacement field is smoothed with a Gaussian whose standard deviations are specified with SetStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothUpdateField ( )

protectedvirtual

Utility to smooth the UpdateBuffer using a Gaussian operator. The amount of smoothing can be specified by setting the UpdateFieldStandardDeviations.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothUpdateFieldOff ( )

virtual

Set/Get whether the update field is smoothed (regularized). Smoothing the update field yields a solution viscous in nature. If SmoothUpdateField is on, then the update field is smoothed with a Gaussian whose standard deviations are specified with SetUpdateFieldStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothUpdateFieldOn ( )

virtual

Set/Get whether the update field is smoothed (regularized). Smoothing the update field yields a solution viscous in nature. If SmoothUpdateField is on, then the update field is smoothed with a Gaussian whose standard deviations are specified with SetUpdateFieldStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::StopRegistration ( )

inlinevirtual

Stop the registration after the current iteration.

Definition at line 230 of file itkPDEDeformableRegistrationFilter.h.

Member Data Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

const unsigned int itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ImageDimension = Superclass::ImageDimension

static

Inherit some enums and typedefs from the superclass.

Definition at line 123 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

double itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_MaximumError

private

Maximum error for Gaussian operator approximation.

Definition at line 324 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

unsigned int itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_MaximumKernelWidth

private

Limits of Gaussian kernel width.

Definition at line 327 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_SmoothDisplacementField

private

Modes to control smoothing of the update and displacement fields

Definition at line 315 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_SmoothUpdateField

private

Definition at line 316 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

StandardDeviationsType itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_StandardDeviations

private

Standard deviation for Gaussian smoothing

Definition at line 308 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_StopRegistrationFlag

private

Flag to indicate user stop registration request.

Definition at line 330 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

DisplacementFieldPointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_TempField

private

Temporary displacement field use for smoothing the the displacement field.

Definition at line 320 of file itkPDEDeformableRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

StandardDeviationsType itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_UpdateFieldStandardDeviations

private

Definition at line 312 of file itkPDEDeformableRegistrationFilter.h.

The documentation for this class was generated from the following file:

itkPDEDeformableRegistrationFilter.h

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField> class itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

Public Types

Public Member Functions

Static Public Member Functions

Static Public Attributes

Protected Member Functions

Private Attributes

Additional Inherited Members

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>
class itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >