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ITK
4.13.0
Insight Segmentation and Registration Toolkit
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#include <itkShapeLabelMapFilter.h>
The valuator class for the ShapeLabelObject.
ShapeLabelMapFilter can be used to set the attributes values of the ShapeLabelObject in a LabelMap.
ShapeLabelMapFilter takes an optional parameter, used only to optimize the computation time and the memory usage when the perimeter or the feret diameter is used: the exact copy of the input LabelMap is stored in an Image. It can be set with SetLabelImage(). It is cleared at the end of the computation, so must be reset before running Update() again. It is not part of the pipeline management design, to let the subclasses of ShapeLabelMapFilter use the pipeline design to specify truly required inputs.
This implementation was taken from the Insight Journal paper: https://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176
Definition at line 53 of file itkShapeLabelMapFilter.h.
Public Types | |
typedef SmartPointer< const Self > | ConstPointer |
typedef ImageType::ConstPointer | ImageConstPointer |
typedef ImageType::Pointer | ImagePointer |
typedef TImage | ImageType |
typedef ImageType::IndexType | IndexType |
typedef LabelImageType::ConstPointer | LabelImageConstPointer |
typedef LabelImageType::Pointer | LabelImagePointer |
typedef TLabelImage | LabelImageType |
typedef ImageType::LabelObjectType | LabelObjectType |
typedef LabelImageType::PixelType | LabelPixelType |
typedef LabelObjectType::MatrixType | MatrixType |
typedef ImageType::OffsetType | OffsetType |
typedef ImageType::PixelType | PixelType |
typedef SmartPointer< Self > | Pointer |
typedef ImageType::RegionType | RegionType |
typedef ShapeLabelMapFilter | Self |
typedef ImageType::SizeType | SizeType |
typedef InPlaceLabelMapFilter < TImage > | Superclass |
typedef LabelObjectType::VectorType | VectorType |
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typedef SmartPointer< const Self > | ConstPointer |
typedef InputImageType::IndexType | IndexType |
typedef InputImageType::ConstPointer | InputImageConstPointer |
typedef InputImageType::PixelType | InputImagePixelType |
typedef InputImageType::Pointer | InputImagePointer |
typedef InputImageType::RegionType | InputImageRegionType |
typedef TImage | InputImageType |
typedef InputImageType::LabelObjectType | LabelObjectType |
typedef Superclass::OutputImagePixelType | OutputImagePixelType |
typedef Superclass::OutputImagePointer | OutputImagePointer |
typedef Superclass::OutputImageRegionType | OutputImageRegionType |
typedef Superclass::OutputImageType | OutputImageType |
typedef InputImageType::PixelType | PixelType |
typedef SmartPointer< Self > | Pointer |
typedef InputImageType::RegionType | RegionType |
typedef InPlaceLabelMapFilter | Self |
typedef LabelMapFilter< TImage, TImage > | Superclass |
typedef TImage | TOutputImage |
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typedef SmartPointer< const Self > | ConstPointer |
typedef Superclass::InputImageConstPointer | InputImageConstPointer |
typedef Superclass::InputImagePixelType | InputImagePixelType |
typedef Superclass::InputImagePointer | InputImagePointer |
typedef Superclass::InputImageRegionType | InputImageRegionType |
typedef Superclass::InputImageType | InputImageType |
typedef InputImageType::LabelObjectType | LabelObjectType |
typedef OutputImageType::ConstPointer | OutputImageConstPointer |
typedef OutputImageType::PixelType | OutputImagePixelType |
typedef OutputImageType::Pointer | OutputImagePointer |
typedef OutputImageType::RegionType | OutputImageRegionType |
typedef TImage | OutputImageType |
typedef SmartPointer< Self > | Pointer |
typedef LabelMapFilter | Self |
typedef ImageToImageFilter < TImage, TImage > | Superclass |
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typedef SmartPointer< const Self > | ConstPointer |
typedef InputImageType::ConstPointer | InputImageConstPointer |
typedef InputImageType::PixelType | InputImagePixelType |
typedef InputImageType::Pointer | InputImagePointer |
typedef InputImageType::RegionType | InputImageRegionType |
typedef TImage | InputImageType |
typedef Superclass::OutputImagePixelType | OutputImagePixelType |
typedef Superclass::OutputImageRegionType | OutputImageRegionType |
typedef SmartPointer< Self > | Pointer |
typedef ImageToImageFilter | Self |
typedef ImageSource< TImage > | Superclass |
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typedef SmartPointer< const Self > | ConstPointer |
typedef Superclass::DataObjectIdentifierType | DataObjectIdentifierType |
typedef DataObject::Pointer | DataObjectPointer |
typedef Superclass::DataObjectPointerArraySizeType | DataObjectPointerArraySizeType |
typedef OutputImageType::PixelType | OutputImagePixelType |
typedef OutputImageType::Pointer | OutputImagePointer |
typedef OutputImageType::RegionType | OutputImageRegionType |
typedef TImage | OutputImageType |
typedef SmartPointer< Self > | Pointer |
typedef ImageSource | Self |
typedef ProcessObject | Superclass |
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typedef SmartPointer< const Self > | ConstPointer |
typedef DataObject::DataObjectIdentifierType | DataObjectIdentifierType |
typedef DataObject::Pointer | DataObjectPointer |
typedef std::vector < DataObjectPointer > | DataObjectPointerArray |
typedef DataObjectPointerArray::size_type | DataObjectPointerArraySizeType |
typedef MultiThreader | MultiThreaderType |
typedef std::vector < DataObjectIdentifierType > | NameArray |
typedef SmartPointer< Self > | Pointer |
typedef ProcessObject | Self |
typedef Object | Superclass |
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typedef SmartPointer< const Self > | ConstPointer |
typedef SmartPointer< Self > | Pointer |
typedef Object | Self |
typedef LightObject | Superclass |
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typedef SmartPointer< const Self > | ConstPointer |
typedef SmartPointer< Self > | Pointer |
typedef LightObject | Self |
Static Public Member Functions | |
static Pointer | New () |
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static Pointer | New () |
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static Pointer | New () |
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static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool flag) |
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static void | BreakOnError () |
static Pointer | New () |
Static Public Attributes | |
static const unsigned int | ImageDimension = TImage::ImageDimension |
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static const unsigned int | InputImageDimension |
static const unsigned int | OutputImageDimension |
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static const unsigned int | InputImageDimension |
static const unsigned int | OutputImageDimension |
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static const unsigned int | InputImageDimension |
static const unsigned int | OutputImageDimension |
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static const unsigned int | OutputImageDimension |
Private Types | |
typedef std::map< Offset2Type, SizeValueType, Offset2Type::LexicographicCompare > | MapIntercept2Type |
typedef std::map< Offset3Type, SizeValueType, Offset3Type::LexicographicCompare > | MapIntercept3Type |
typedef itk::Offset< 2 > | Offset2Type |
typedef itk::Offset< 3 > | Offset3Type |
typedef itk::Vector< double, 2 > | Spacing2Type |
typedef itk::Vector< double, 3 > | Spacing3Type |
Private Member Functions | |
void | ComputeFeretDiameter (LabelObjectType *labelObject) |
void | ComputeOrientedBoundingBox (LabelObjectType *labelObject) |
void | ComputePerimeter (LabelObjectType *labelObject) |
template<typename TMapIntercept , typename TSpacing > | |
double | PerimeterFromInterceptCount (TMapIntercept &intercepts, const TSpacing &spacing) |
double | PerimeterFromInterceptCount (MapIntercept2Type &intercepts, const Spacing2Type spacing) |
double | PerimeterFromInterceptCount (MapIntercept3Type &intercepts, const Spacing3Type spacing) |
Private Attributes | |
bool | m_ComputeFeretDiameter |
bool | m_ComputeOrientedBoundingBox |
bool | m_ComputePerimeter |
LabelImageConstPointer | m_LabelImage |
Additional Inherited Members | |
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typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension) > | InputToOutputRegionCopierType |
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension) > | OutputToInputRegionCopierType |
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static const ImageRegionSplitterBase * | GetGlobalDefaultSplitter () |
static ITK_THREAD_RETURN_TYPE | ThreaderCallback (void *arg) |
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FastMutexLock::Pointer | m_LabelObjectContainerLock |
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TimeStamp | m_OutputInformationMTime |
bool | m_Updating |
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AtomicInt< int > | m_ReferenceCount |
typedef SmartPointer< const Self > itk::ShapeLabelMapFilter< TImage, TLabelImage >::ConstPointer |
Definition at line 62 of file itkShapeLabelMapFilter.h.
typedef ImageType::ConstPointer itk::ShapeLabelMapFilter< TImage, TLabelImage >::ImageConstPointer |
Definition at line 67 of file itkShapeLabelMapFilter.h.
typedef ImageType::Pointer itk::ShapeLabelMapFilter< TImage, TLabelImage >::ImagePointer |
Definition at line 66 of file itkShapeLabelMapFilter.h.
typedef TImage itk::ShapeLabelMapFilter< TImage, TLabelImage >::ImageType |
Some convenient typedefs.
Definition at line 65 of file itkShapeLabelMapFilter.h.
typedef ImageType::IndexType itk::ShapeLabelMapFilter< TImage, TLabelImage >::IndexType |
Definition at line 69 of file itkShapeLabelMapFilter.h.
typedef LabelImageType::ConstPointer itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelImageConstPointer |
Definition at line 79 of file itkShapeLabelMapFilter.h.
typedef LabelImageType::Pointer itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelImagePointer |
Definition at line 78 of file itkShapeLabelMapFilter.h.
typedef TLabelImage itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelImageType |
Definition at line 77 of file itkShapeLabelMapFilter.h.
typedef ImageType::LabelObjectType itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelObjectType |
Definition at line 73 of file itkShapeLabelMapFilter.h.
typedef LabelImageType::PixelType itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelPixelType |
Definition at line 80 of file itkShapeLabelMapFilter.h.
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Definition at line 164 of file itkShapeLabelMapFilter.h.
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Definition at line 165 of file itkShapeLabelMapFilter.h.
typedef LabelObjectType::MatrixType itk::ShapeLabelMapFilter< TImage, TLabelImage >::MatrixType |
Definition at line 74 of file itkShapeLabelMapFilter.h.
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Definition at line 160 of file itkShapeLabelMapFilter.h.
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Definition at line 161 of file itkShapeLabelMapFilter.h.
typedef ImageType::OffsetType itk::ShapeLabelMapFilter< TImage, TLabelImage >::OffsetType |
Definition at line 72 of file itkShapeLabelMapFilter.h.
typedef ImageType::PixelType itk::ShapeLabelMapFilter< TImage, TLabelImage >::PixelType |
Definition at line 68 of file itkShapeLabelMapFilter.h.
typedef SmartPointer< Self > itk::ShapeLabelMapFilter< TImage, TLabelImage >::Pointer |
Definition at line 61 of file itkShapeLabelMapFilter.h.
typedef ImageType::RegionType itk::ShapeLabelMapFilter< TImage, TLabelImage >::RegionType |
Definition at line 71 of file itkShapeLabelMapFilter.h.
typedef ShapeLabelMapFilter itk::ShapeLabelMapFilter< TImage, TLabelImage >::Self |
Standard class typedefs.
Definition at line 59 of file itkShapeLabelMapFilter.h.
typedef ImageType::SizeType itk::ShapeLabelMapFilter< TImage, TLabelImage >::SizeType |
Definition at line 70 of file itkShapeLabelMapFilter.h.
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Definition at line 162 of file itkShapeLabelMapFilter.h.
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Definition at line 163 of file itkShapeLabelMapFilter.h.
typedef InPlaceLabelMapFilter< TImage > itk::ShapeLabelMapFilter< TImage, TLabelImage >::Superclass |
Definition at line 60 of file itkShapeLabelMapFilter.h.
typedef LabelObjectType::VectorType itk::ShapeLabelMapFilter< TImage, TLabelImage >::VectorType |
Definition at line 75 of file itkShapeLabelMapFilter.h.
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Definition at line 138 of file itkShapeLabelMapFilter.h.
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If an imaging filter needs to perform processing after all processing threads have completed, the filter can can provide an implementation for AfterThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.
Reimplemented from itk::LabelMapFilter< TImage, TImage >.
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If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.
Reimplemented from itk::LabelMapFilter< TImage, TImage >.
Reimplemented in itk::StatisticsLabelMapFilter< TImage, TFeatureImage >.
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Set/Get whether the maximum Feret diameter should be computed or not. Default value is false because of the high computation time required.
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Set/Get whether the maximum Feret diameter should be computed or not. Default value is false because of the high computation time required.
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Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.
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Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.
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Set/Get whether the perimeter should be computed or not. Default value is true;
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Set/Get whether the perimeter should be computed or not. Default value is true;
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Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::Object.
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Set/Get whether the maximum Feret diameter should be computed or not. Default value is false because of the high computation time required.
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Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.
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Set/Get whether the perimeter should be computed or not. Default value is true;
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Runtime information support.
Reimplemented from itk::InPlaceLabelMapFilter< TImage >.
Reimplemented in itk::StatisticsLabelMapFilter< TImage, TFeatureImage >.
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Standard New method.
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Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::InPlaceLabelMapFilter< TImage >.
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Set/Get whether the maximum Feret diameter should be computed or not. Default value is false because of the high computation time required.
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Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.
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Set/Get whether the perimeter should be computed or not. Default value is true;
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Set the label image
Definition at line 131 of file itkShapeLabelMapFilter.h.
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ImageDimension constants
Definition at line 83 of file itkShapeLabelMapFilter.h.
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Definition at line 149 of file itkShapeLabelMapFilter.h.
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Definition at line 153 of file itkShapeLabelMapFilter.h.
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Definition at line 152 of file itkShapeLabelMapFilter.h.
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Definition at line 154 of file itkShapeLabelMapFilter.h.