template<typename TInputImage, typename TFeatureImage, typename TOutputPixelType = float>
class itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >
A base class which defines the API for implementing a level set segmentation filter with statistical shape influence.
- OVERVIEW
- This class extends the functionality of SegmentationLevelSetImageFilter with an additional statistical shape influence term in the level set evolution as developed in [1].
- TEMPLATE PARAMETERS
- There are two required and one optional template parameter for these filters.
TInputImage is the image type of the initial model you will input to the filter using SetInput() or SetInitialImage().
TFeatureImage is the image type of the image from which the filter will calculate the speed term for segmentation (see INPUTS).
TOutputPixelType is the data type used for the output image phi, the implicit level set image. This should really only ever be set as float (default) or double.
- PARAMETERS
- From a level set evolution point of view, the shape is represented by a signed distance function from the shape encapsulated in a ShapeSignedDistanceFunction object.
- See Also
- ShapeSignedDistanceFunction
-
ShapePriorSegmentationLevelSetFunction
- REFERENCES
- [1] Leventon, M.E. et al. "Statistical Shape Influence in Geodesic Active Contours", CVPR 2000.
Definition at line 75 of file itkShapePriorSegmentationLevelSetImageFilter.h.
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef CostFunctionType::Pointer | CostFunctionPointer |
|
typedef
ShapePriorMAPCostFunctionBase
< TFeatureImage,
TOutputPixelType > | CostFunctionType |
|
typedef
Superclass::FeatureImageType | FeatureImageType |
|
typedef NodeContainerType::Pointer | NodeContainerPointer |
|
typedef
CostFunctionType::NodeContainerType | NodeContainerType |
|
typedef CostFunctionType::NodeType | NodeType |
|
typedef OptimizerType::Pointer | OptimizerPointer |
|
typedef
SingleValuedNonLinearOptimizer | OptimizerType |
|
typedef Superclass::OutputImageType | OutputImageType |
|
typedef TOutputPixelType | OutputPixelType |
|
typedef
CostFunctionType::ParametersType | ParametersType |
|
typedef SmartPointer< Self > | Pointer |
|
typedef
ShapePriorSegmentationLevelSetImageFilter | Self |
|
typedef ShapeFunctionType::Pointer | ShapeFunctionPointer |
|
typedef
ShapePriorSegmentationFunctionType::ShapeFunctionType | ShapeFunctionType |
|
typedef
ShapePriorSegmentationLevelSetFunction
< OutputImageType,
FeatureImageType > | ShapePriorSegmentationFunctionType |
|
typedef
SegmentationLevelSetImageFilter
< TInputImage, TFeatureImage,
TOutputPixelType > | Superclass |
|
typedef Superclass::ValueType | ValueType |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef TFeatureImage | FeatureImageType |
|
typedef Superclass::IndexType | IndexType |
|
typedef Superclass::InputImageType | InputImageType |
|
typedef Image
< TOutputPixelType,
itkGetStaticConstMacro(InputImageDimension) > | OutputImageType |
|
typedef SmartPointer< Self > | Pointer |
|
typedef
SegmentationLevelSetFunction
< OutputImageType,
FeatureImageType > | SegmentationFunctionType |
|
typedef
SegmentationLevelSetImageFilter | Self |
|
typedef
SegmentationFunctionType::ImageType | SpeedImageType |
|
typedef
SparseFieldLevelSetImageFilter
< TInputImage, OutputImageType > | Superclass |
|
typedef Superclass::TimeStepType | TimeStepType |
|
typedef Superclass::ValueType | ValueType |
|
typedef
SegmentationFunctionType::VectorImageType | VectorImageType |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef OutputImageType::IndexType | IndexType |
|
typedef TInputImage | InputImageType |
|
typedef std::vector
< LayerPointerType > | LayerListType |
|
typedef ObjectStore
< LayerNodeType > | LayerNodeStorageType |
|
typedef
SparseFieldLevelSetNode
< IndexType > | LayerNodeType |
|
typedef LayerType::Pointer | LayerPointerType |
|
typedef SparseFieldLayer
< LayerNodeType > | LayerType |
|
typedef
Superclass::NeighborhoodScalesType | NeighborhoodScalesType |
|
typedef Image
< TOutputPixelType,
TInputImage::ImageDimension > | OutputImageType |
|
typedef SmartPointer< Self > | Pointer |
|
typedef Superclass::RadiusType | RadiusType |
|
typedef
SparseFieldLevelSetImageFilter | Self |
|
typedef Image< StatusType,
itkGetStaticConstMacro(ImageDimension) > | StatusImageType |
|
typedef signed char | StatusType |
|
typedef
FiniteDifferenceImageFilter
< TInputImage, Image
< TOutputPixelType,
TInputImage::ImageDimension > > | Superclass |
|
typedef Superclass::TimeStepType | TimeStepType |
|
typedef std::vector< ValueType > | UpdateBufferType |
|
typedef OutputImageType::ValueType | ValueType |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef
FiniteDifferenceFunction
< Image< TOutputPixelType,
TInputImage::ImageDimension > > | FiniteDifferenceFunctionType |
|
typedef TInputImage | InputImageType |
|
typedef TInputImage::PixelType | InputPixelType |
|
typedef NumericTraits
< InputPixelType >::ValueType | InputPixelValueType |
|
typedef
FiniteDifferenceFunctionType::NeighborhoodScalesType | NeighborhoodScalesType |
|
typedef Image
< TOutputPixelType,
TInputImage::ImageDimension > | OutputImageType |
|
typedef Image
< TOutputPixelType,
TInputImage::ImageDimension >
::PixelType | OutputPixelType |
|
typedef NumericTraits
< OutputPixelType >::ValueType | OutputPixelValueType |
|
typedef OutputPixelType | PixelType |
|
typedef SmartPointer< Self > | Pointer |
|
typedef
FiniteDifferenceFunctionType::RadiusType | RadiusType |
|
typedef FiniteDifferenceImageFilter | Self |
|
typedef InPlaceImageFilter
< TInputImage, Image
< TOutputPixelType,
TInputImage::ImageDimension > > | Superclass |
|
typedef
FiniteDifferenceFunctionType::TimeStepType | TimeStepType |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef
InputImageType::ConstPointer | InputImageConstPointer |
|
typedef InputImageType::PixelType | InputImagePixelType |
|
typedef InputImageType::Pointer | InputImagePointer |
|
typedef InputImageType::RegionType | InputImageRegionType |
|
typedef TInputImage | InputImageType |
|
typedef
Superclass::OutputImagePixelType | OutputImagePixelType |
|
typedef
Superclass::OutputImagePointer | OutputImagePointer |
|
typedef
Superclass::OutputImageRegionType | OutputImageRegionType |
|
typedef Superclass::OutputImageType | OutputImageType |
|
typedef SmartPointer< Self > | Pointer |
|
typedef InPlaceImageFilter | Self |
|
typedef ImageToImageFilter
< TInputImage, Image
< TOutputPixelType,
TInputImage::ImageDimension > > | Superclass |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef
InputImageType::ConstPointer | InputImageConstPointer |
|
typedef InputImageType::PixelType | InputImagePixelType |
|
typedef InputImageType::Pointer | InputImagePointer |
|
typedef InputImageType::RegionType | InputImageRegionType |
|
typedef TInputImage | InputImageType |
|
typedef
Superclass::OutputImagePixelType | OutputImagePixelType |
|
typedef
Superclass::OutputImageRegionType | OutputImageRegionType |
|
typedef SmartPointer< Self > | Pointer |
|
typedef ImageToImageFilter | Self |
|
typedef ImageSource< Image
< TOutputPixelType,
TInputImage::ImageDimension > > | Superclass |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef
Superclass::DataObjectIdentifierType | DataObjectIdentifierType |
|
typedef DataObject::Pointer | DataObjectPointer |
|
typedef
Superclass::DataObjectPointerArraySizeType | DataObjectPointerArraySizeType |
|
typedef OutputImageType::PixelType | OutputImagePixelType |
|
typedef OutputImageType::Pointer | OutputImagePointer |
|
typedef OutputImageType::RegionType | OutputImageRegionType |
|
typedef Image
< TOutputPixelType,
TInputImage::ImageDimension > | OutputImageType |
|
typedef SmartPointer< Self > | Pointer |
|
typedef ImageSource | Self |
|
typedef ProcessObject | Superclass |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef
DataObject::DataObjectIdentifierType | DataObjectIdentifierType |
|
typedef DataObject::Pointer | DataObjectPointer |
|
typedef std::vector
< DataObjectPointer > | DataObjectPointerArray |
|
typedef
DataObjectPointerArray::size_type | DataObjectPointerArraySizeType |
|
typedef MultiThreader | MultiThreaderType |
|
typedef std::vector
< DataObjectIdentifierType > | NameArray |
|
typedef SmartPointer< Self > | Pointer |
|
typedef ProcessObject | Self |
|
typedef Object | Superclass |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef SmartPointer< Self > | Pointer |
|
typedef Object | Self |
|
typedef LightObject | Superclass |
|
typedef SmartPointer< const Self > | ConstPointer |
|
typedef SmartPointer< Self > | Pointer |
|
typedef LightObject | Self |
|
|
void | ExtractActiveRegion (NodeContainerType *ptr) |
|
void | GenerateData () override |
|
virtual void | InitializeIteration () override |
|
virtual void | PrintSelf (std::ostream &os, Indent indent) const override |
|
| ShapePriorSegmentationLevelSetImageFilter () |
|
virtual | ~ShapePriorSegmentationLevelSetImageFilter () override |
|
| SegmentationLevelSetImageFilter () |
|
virtual | ~SegmentationLevelSetImageFilter () override |
|
void | AllocateUpdateBuffer () override |
|
void | ApplyUpdate (const TimeStepType &dt) override |
|
TimeStepType | CalculateChange () override |
|
virtual ValueType | CalculateUpdateValue (const IndexType &, const TimeStepType &dt, const ValueType &value, const ValueType &change) |
|
void | ConstructActiveLayer () |
|
void | ConstructLayer (StatusType from, StatusType to) |
|
void | CopyInputToOutput () override |
|
virtual ValueType | GetValueOne () const |
|
virtual ValueType | GetValueZero () const |
|
void | Initialize () override |
|
void | InitializeActiveLayerValues () |
|
virtual void | InitializeBackgroundPixels () |
|
virtual void | PostProcessOutput () override |
|
void | ProcessOutsideList (LayerType *OutsideList, StatusType ChangeToStatus) |
|
void | ProcessStatusList (LayerType *InputList, LayerType *OutputList, StatusType ChangeToStatus, StatusType SearchForStatus) |
|
void | PropagateAllLayerValues () |
|
void | PropagateLayerValues (StatusType from, StatusType to, StatusType promote, int InOrOut) |
|
| SparseFieldLevelSetImageFilter () |
|
void | UpdateActiveLayerValues (TimeStepType dt, LayerType *StatusUpList, LayerType *StatusDownList) |
|
| ~SparseFieldLevelSetImageFilter () override |
|
| FiniteDifferenceImageFilter () |
|
virtual void | GenerateInputRequestedRegion () override |
|
virtual bool | Halt () |
|
virtual TimeStepType | ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const |
|
virtual void | SetElapsedIterations (IdentifierType _arg) |
|
virtual bool | ThreadedHalt (void *) |
|
virtual | ~FiniteDifferenceImageFilter () override |
|
virtual void | AllocateOutputs () override |
|
virtual bool | GetRunningInPlace () const |
|
| InPlaceImageFilter () |
|
virtual void | ReleaseInputs () override |
|
| ~InPlaceImageFilter () override |
|
virtual void | CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion) |
|
virtual void | CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion) |
|
| ImageToImageFilter () |
|
virtual void | VerifyInputInformation () override |
|
| ~ImageToImageFilter () override |
|
void | PushBackInput (const DataObject *input) override |
|
void | PushFrontInput (const DataObject *input) override |
|
virtual void | AfterThreadedGenerateData () |
|
virtual void | BeforeThreadedGenerateData () |
|
virtual const
ImageRegionSplitterBase * | GetImageRegionSplitter () const |
|
| ImageSource () |
|
virtual unsigned int | SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion) |
|
virtual void | ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId) |
|
virtual | ~ImageSource () override |
|
virtual void | AddInput (DataObject *input) |
|
void | AddOptionalInputName (const DataObjectIdentifierType &) |
|
void | AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx) |
|
virtual void | AddOutput (DataObject *output) |
|
bool | AddRequiredInputName (const DataObjectIdentifierType &) |
|
bool | AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx) |
|
virtual void | CacheInputReleaseDataFlags () |
|
virtual void | GenerateOutputInformation () |
|
virtual void | GenerateOutputRequestedRegion (DataObject *output) |
|
DataObject * | GetInput (const DataObjectIdentifierType &key) |
|
const DataObject * | GetInput (const DataObjectIdentifierType &key) const |
|
virtual const
DataObjectPointerArraySizeType & | GetNumberOfRequiredInputs () const |
|
virtual const
DataObjectPointerArraySizeType & | GetNumberOfRequiredOutputs () const |
|
bool | IsIndexedInputName (const DataObjectIdentifierType &) const |
|
bool | IsIndexedOutputName (const DataObjectIdentifierType &) const |
|
bool | IsRequiredInputName (const DataObjectIdentifierType &) const |
|
| itkLegacyMacro (virtual void RemoveOutput(DataObject *output)) |
|
| itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num)) |
|
| itkLegacyMacro (virtual void RemoveInput(DataObject *input)) |
|
| itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num)) |
|
DataObjectPointerArraySizeType | MakeIndexFromInputName (const DataObjectIdentifierType &name) const |
|
DataObjectPointerArraySizeType | MakeIndexFromOutputName (const DataObjectIdentifierType &name) const |
|
DataObjectIdentifierType | MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const |
|
DataObjectIdentifierType | MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const |
|
| ProcessObject () |
|
virtual void | PropagateResetPipeline () |
|
virtual void | RemoveInput (const DataObjectIdentifierType &key) |
|
virtual void | RemoveInput (DataObjectPointerArraySizeType) |
|
virtual void | RemoveOutput (const DataObjectIdentifierType &key) |
|
virtual void | RemoveOutput (DataObjectPointerArraySizeType idx) |
|
bool | RemoveRequiredInputName (const DataObjectIdentifierType &) |
|
virtual void | RestoreInputReleaseDataFlags () |
|
virtual void | SetInput (const DataObjectIdentifierType &key, DataObject *input) |
|
virtual void | SetNthInput (DataObjectPointerArraySizeType num, DataObject *input) |
|
virtual void | SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output) |
|
void | SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num) |
|
void | SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num) |
|
virtual void | SetNumberOfRequiredInputs (DataObjectPointerArraySizeType) |
|
virtual void | SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg) |
|
virtual void | SetOutput (const DataObjectIdentifierType &key, DataObject *output) |
|
virtual void | SetPrimaryInput (DataObject *input) |
|
virtual void | SetPrimaryOutput (DataObject *output) |
|
void | SetRequiredInputNames (const NameArray &) |
|
virtual void | VerifyPreconditions () |
|
| ~ProcessObject () override |
|
DataObject * | GetInput (DataObjectPointerArraySizeType idx) |
|
const DataObject * | GetInput (DataObjectPointerArraySizeType idx) const |
|
DataObject * | GetPrimaryInput () |
|
const DataObject * | GetPrimaryInput () const |
|
virtual void | SetPrimaryInputName (const DataObjectIdentifierType &key) |
|
virtual const char * | GetPrimaryInputName (void) const |
|
DataObject * | GetOutput (const DataObjectIdentifierType &key) |
|
const DataObject * | GetOutput (const DataObjectIdentifierType &key) const |
|
virtual void | SetPrimaryOutputName (const DataObjectIdentifierType &key) |
|
virtual const char * | GetPrimaryOutputName (void) const |
|
DataObject * | GetOutput (DataObjectPointerArraySizeType idx) |
|
const DataObject * | GetOutput (DataObjectPointerArraySizeType idx) const |
|
DataObject * | GetPrimaryOutput () |
|
const DataObject * | GetPrimaryOutput () const |
|
| Object () |
|
bool | PrintObservers (std::ostream &os, Indent indent) const |
|
virtual void | SetTimeStamp (const TimeStamp &time) |
|
virtual | ~Object () override |
|
virtual LightObject::Pointer | InternalClone () const |
|
| LightObject () |
|
virtual void | PrintHeader (std::ostream &os, Indent indent) const |
|
virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
|
virtual | ~LightObject () |
|