ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Private Types | Private Member Functions | Private Attributes
itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh > Class Template Reference

#include <itkConformalFlatteningMeshFilter.h>

+ Inheritance diagram for itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >:
+ Collaboration diagram for itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >:

List of all members.

Public Types

typedef CellType::CellAutoPointer CellAutoPointer
typedef
InputMeshType::CellIdentifier 
CellIdentifier
typedef
CellsContainer::ConstIterator 
CellIterator
typedef
InputMeshType::CellsContainer 
CellsContainer
typedef InputMeshType::CellType CellType
typedef SmartPointer< const SelfConstPointer
typedef double CoordRepType
typedef InputMeshType::ConstPointer InputMeshConstPointer
typedef TInputMesh InputMeshType
typedef InputMeshType::PointType InputPointType
typedef OutputMeshType::Pointer OutputMeshPointer
typedef TOutputMesh OutputMeshType
typedef OutputMeshType::PointType OutputPointType
typedef SmartPointer< SelfPointer
typedef
InputMeshType::PointIdentifier 
PointIdentifier
typedef CellType::PointIdIterator PointIdIterator
typedef
PointsContainer::ConstIterator 
PointIterator
typedef
InputMeshType::PointsContainer 
PointsContainer
typedef
ConformalFlatteningMeshFilter 
Self
typedef MeshToMeshFilter
< TInputMesh, TOutputMesh > 
Superclass
- Public Types inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
typedef InputMeshType::Pointer InputMeshPointer
- Public Types inherited from itk::MeshSource< TOutputMesh >
typedef
Superclass::DataObjectIdentifierType 
DataObjectIdentifierType
typedef DataObject::Pointer DataObjectPointer
typedef
ProcessObject::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
- Public Types inherited from itk::ProcessObject
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
typedef std::vector
< DataObjectIdentifierType
NameArray
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual const char * GetNameOfClass () const
void MapToPlane (void)
void MapToSphere (void)
void SetPolarCellIdentifier (CellIdentifier cellId)
void SetScale (double)
- Public Member Functions inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
const InputMeshTypeGetInput (void) const
const InputMeshTypeGetInput (unsigned int idx) const
void SetInput (const InputMeshType *input)
- Public Member Functions inherited from itk::MeshSource< TOutputMesh >
OutputMeshTypeGetOutput (void)
OutputMeshTypeGetOutput (unsigned int idx)
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
void SetOutput (TOutputMesh *output)
virtual void GraftOutput (DataObject *output)
virtual DataObjectPointer MakeOutput (DataObjectPointerArraySizeType idx)
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
virtual void AbortGenerateDataOn ()
virtual void EnlargeOutputRequestedRegion (DataObject *)
virtual const bool & GetAbortGenerateData ()
NameArray GetInputNames () const
MultiThreader * GetMultiThreader () const
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType GetNumberOfInputs () const
DataObjectPointerArraySizeType GetNumberOfOutputs () const
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
NameArray GetOutputNames () const
virtual const float & GetProgress ()
NameArray GetRequiredInputNames () const
bool HasInput (const DataObjectIdentifierType &key) const
bool HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
virtual void PrepareOutputs ()
virtual void PropagateRequestedRegion (DataObject *output)
virtual void ResetPipeline ()
virtual void SetAbortGenerateData (bool _arg)
virtual void SetProgress (float _arg)
virtual void Update ()
virtual void UpdateLargestPossibleRegion ()
virtual void UpdateOutputData (DataObject *output)
virtual void UpdateOutputInformation ()
void UpdateProgress (float amount)
DataObjectPointerArray GetInputs ()
DataObjectPointerArray GetOutputs ()
DataObjectPointerArray GetIndexedInputs ()
DataObjectPointerArray GetIndexedOutputs ()
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
virtual void SetReleaseDataFlag (bool flag)
virtual bool GetReleaseDataFlag () const
void ReleaseDataFlagOn ()
void ReleaseDataFlagOff ()
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
virtual void ReleaseDataBeforeUpdateFlagOn ()
virtual void ReleaseDataBeforeUpdateFlagOff ()
virtual void SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdTypeGetNumberOfThreads ()
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
unsigned long AddObserver (const EventObject &event, Command *) const
virtual void DebugOff () const
virtual void DebugOn () const
CommandGetCommand (unsigned long tag)
bool GetDebug () const
MetaDataDictionaryGetMetaDataDictionary (void)
const MetaDataDictionaryGetMetaDataDictionary (void) const
virtual unsigned long GetMTime () const
virtual const TimeStampGetTimeStamp () const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &)
void InvokeEvent (const EventObject &) const
virtual void Modified () const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
virtual int GetReferenceCount () const
 itkCloneMacro (Self)
void Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions

static Pointer New ()

Static Public Attributes

static const unsigned int InputPointDimension = ::itk::GetMeshDimension< TInputMesh >::PointDimension
static const unsigned int OutputPointDimension = ::itk::GetMeshDimension< TOutputMesh >::PointDimension

Protected Member Functions

 ConformalFlatteningMeshFilter ()
virtual void GenerateData (void)
void PrintSelf (std::ostream &os, Indent indent) const
 ~ConformalFlatteningMeshFilter ()
- Protected Member Functions inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
void CopyInputMeshToOutputMeshCellData ()
void CopyInputMeshToOutputMeshCellLinks ()
void CopyInputMeshToOutputMeshCells ()
void CopyInputMeshToOutputMeshPointData ()
void CopyInputMeshToOutputMeshPoints ()
 MeshToMeshFilter ()
 ~MeshToMeshFilter ()
- Protected Member Functions inherited from itk::MeshSource< TOutputMesh >
void GenerateInputRequestedRegion ()
 MeshSource ()
virtual ~MeshSource ()
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
virtual void AddOutput (DataObject *output)
bool AddRequiredInputName (const DataObjectIdentifierType &)
virtual void CacheInputReleaseDataFlags ()
virtual void GenerateOutputInformation ()
virtual void GenerateOutputRequestedRegion (DataObject *output)
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs ()
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs ()
bool IsIndexedName (const DataObjectIdentifierType &) const
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType MakeNameFromIndex (DataObjectPointerArraySizeType) const
 ProcessObject ()
virtual void PropagateResetPipeline ()
virtual void ReleaseInputs ()
virtual void RemoveInput (const DataObjectIdentifierType &key)
virtual void RemoveInput (DataObjectPointerArraySizeType)
virtual void RemoveOutput (const DataObjectIdentifierType &key)
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void RestoreInputReleaseDataFlags ()
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void SetPrimaryInput (DataObject *input)
virtual void SetPrimaryOutput (DataObject *output)
void SetRequiredInputNames (const NameArray &)
virtual void VerifyInputInformation ()
virtual void VerifyPreconditions ()
 ~ProcessObject ()
DataObjectGetInput (const DataObjectIdentifierType &key)
const DataObjectGetInput (const DataObjectIdentifierType &key) const
DataObjectGetInput (DataObjectPointerArraySizeType)
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
DataObjectGetPrimaryInput ()
const DataObjectGetPrimaryInput () const
DataObjectGetOutput (const DataObjectIdentifierType &key)
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
DataObjectGetPrimaryOutput ()
const DataObjectGetPrimaryOutput () const
virtual void PushBackInput (const DataObject *input)
virtual void PopBackInput ()
virtual void PushFrontInput (const DataObject *input)
virtual void PopFrontInput ()
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Private Types

typedef vnl_sparse_matrix
< CoordRepType
SparseMatrixCoordType
typedef vnl_vector< CoordRepTypeVectorCoordType

Private Member Functions

 ConformalFlatteningMeshFilter (const ConformalFlatteningMeshFilter &)
void operator= (const ConformalFlatteningMeshFilter &)

Private Attributes

double m_MapScale
bool m_MapToSphere
unsigned int m_PolarCellIdentifier

Detailed Description

template<class TInputMesh, class TOutputMesh>
class itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >

ConformalFlatteningMeshFilter applies a conformal mapping from 3D to 2D.

This code was contributed in the Insight Journal paper: "Conformal Flattening ITK Filter" by Gao Y., Melonakos J., Tannenbaum A. http://hdl.handle.net/1926/225 http://www.insight-journal.org/browse/publication/112

See also:
TransformMeshFilter

Definition at line 48 of file itkConformalFlatteningMeshFilter.h.


Member Typedef Documentation

template<class TInputMesh , class TOutputMesh >
typedef CellType::CellAutoPointer itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::CellAutoPointer

Definition at line 93 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::CellIdentifier itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::CellIdentifier

Definition at line 88 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef CellsContainer::ConstIterator itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::CellIterator

Definition at line 90 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::CellsContainer itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::CellsContainer

Definition at line 86 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::CellType itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::CellType

Definition at line 91 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef SmartPointer< const Self > itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::ConstPointer
template<class TInputMesh , class TOutputMesh >
typedef double itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::CoordRepType

Type for representing coordinates.

Definition at line 70 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::ConstPointer itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::InputMeshConstPointer

Definition at line 63 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef TInputMesh itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::InputMeshType

Some convenient typedefs.

Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >.

Definition at line 55 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::PointType itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::InputPointType

Definition at line 65 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef OutputMeshType::Pointer itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::OutputMeshPointer
template<class TInputMesh , class TOutputMesh >
typedef TOutputMesh itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::OutputMeshType
template<class TInputMesh , class TOutputMesh >
typedef OutputMeshType::PointType itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::OutputPointType

Definition at line 66 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef SmartPointer< Self > itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::Pointer
template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::PointIdentifier itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::PointIdentifier

Definition at line 87 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef CellType::PointIdIterator itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::PointIdIterator

Definition at line 92 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef PointsContainer::ConstIterator itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::PointIterator

Definition at line 89 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::PointsContainer itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::PointsContainer

Definition at line 85 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef ConformalFlatteningMeshFilter itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::Self

Standard class typedefs.

Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >.

Definition at line 53 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef vnl_sparse_matrix< CoordRepType > itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::SparseMatrixCoordType
private

Definition at line 128 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef MeshToMeshFilter< TInputMesh, TOutputMesh > itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::Superclass
template<class TInputMesh , class TOutputMesh >
typedef vnl_vector< CoordRepType > itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::VectorCoordType
private

Definition at line 127 of file itkConformalFlatteningMeshFilter.h.


Constructor & Destructor Documentation

template<class TInputMesh , class TOutputMesh >
itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::ConformalFlatteningMeshFilter ( )
protected
template<class TInputMesh , class TOutputMesh >
itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::~ConformalFlatteningMeshFilter ( )
inlineprotected

Definition at line 115 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::ConformalFlatteningMeshFilter ( const ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh > &  )
private

Member Function Documentation

template<class TInputMesh , class TOutputMesh >
virtual::itk::LightObject::Pointer itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
virtual void itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::GenerateData ( void  )
protectedvirtual

Generate Requested Data

Reimplemented from itk::ProcessObject.

template<class TInputMesh , class TOutputMesh >
virtual const char* itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
void itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::MapToPlane ( void  )

Define that the input surface will be mapped to a plane. This skips the steps of the stereographic projection.

template<class TInputMesh , class TOutputMesh >
void itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::MapToSphere ( void  )

Define that the input surface will be mapped to a sphere

template<class TInputMesh , class TOutputMesh >
static Pointer itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::New ( )
static

Method for creation through the object factory.

Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
void itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::operator= ( const ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh > &  )
private
template<class TInputMesh , class TOutputMesh >
void itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::MeshSource< TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
void itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::SetPolarCellIdentifier ( CellIdentifier  cellId)

Select the cell that will be used as reference for the flattening. This value must be the identifier of a cell existing in the input Mesh. A point of this cell will be mapped to infinity on the plane, or it will be mapped to the north-pole on the sphere. It is recommended to select a cell whose curvature is relatively flat.

template<class TInputMesh , class TOutputMesh >
void itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::SetScale ( double  )

Define the scale of the mapping. The largest coordinates of the furthest point in the plane is m_MapScale.


Member Data Documentation

template<class TInputMesh , class TOutputMesh >
const unsigned int itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::InputPointDimension = ::itk::GetMeshDimension< TInputMesh >::PointDimension
static

Convenient constants obtained from TMeshTraits template parameter.

Definition at line 80 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
double itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::m_MapScale
private

The scale when mapping to the plane. Determines how far the farthest point goes.

Definition at line 139 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
bool itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::m_MapToSphere
private

Whether the result is sphere or plane.

Definition at line 135 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
unsigned int itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::m_PolarCellIdentifier
private

Cell Id in which the point P, which is used to define the mapping, lies in.

Definition at line 132 of file itkConformalFlatteningMeshFilter.h.

template<class TInputMesh , class TOutputMesh >
const unsigned int itk::ConformalFlatteningMeshFilter< TInputMesh, TOutputMesh >::OutputPointDimension = ::itk::GetMeshDimension< TOutputMesh >::PointDimension
static

Convenient constants obtained from TMeshTraits template parameter.

Definition at line 82 of file itkConformalFlatteningMeshFilter.h.


The documentation for this class was generated from the following file: